EY727741

Overview
NameEY727741
Unique NameEY727741
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length980
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY727741 vs. ExPASy Swiss-Prot
Match: BAT3_RAT (Large proline-rich protein BAT3 OS=Rattus norvegicus GN=Bat3 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.678e-14
Identity = 52/133 (39.10%), Postives = 72/133 (54.14%), Query Frame = 2
Query:  149 TIEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYHVEDGHTLHMVVRQPV-----------TSSSDGTHN---LPGT----SRSHGNHVAPSVVIETFNLPDRGDGV 493
            ++E+ +KTLDSQT T  V  Q+ V   KE IA+   + SE+QRLI +G+VL+DD+ L  Y+V  G  +H+V R P            T S+  TH    LPGT    +  H  +    V++ TFNLP  G  V
Sbjct:   16 SLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQDYNV-GGKVIHLVERAPPQTQLPSGASSGTGSASATHGGGPLPGTRGPGASGHDRNANSYVMVGTFNLPSDGSAV 147          
BLAST of EY727741 vs. ExPASy Swiss-Prot
Match: BAT3_MOUSE (Large proline-rich protein BAT3 OS=Mus musculus GN=Bat3 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.804e-14
Identity = 52/133 (39.10%), Postives = 72/133 (54.14%), Query Frame = 2
Query:  149 TIEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYHVEDGHTLHMVVRQPV-----------TSSSDGTHN---LPGT----SRSHGNHVAPSVVIETFNLPDRGDGV 493
            ++E+ +KTLDSQT T  V  Q+ V   KE IA+   + SE+QRLI +G+VL+DD+ L  Y+V  G  +H+V R P            T S+  TH    LPGT    +  H  +    V++ TFNLP  G  V
Sbjct:   16 SLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNV-GGKVIHLVERAPPQTQLPSGASSGTGSASATHGGAPLPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAV 147          
BLAST of EY727741 vs. ExPASy Swiss-Prot
Match: BAT3_HUMAN (Large proline-rich protein BAT3 OS=Homo sapiens GN=BAT3 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.384e-13
Identity = 51/133 (38.35%), Postives = 72/133 (54.14%), Query Frame = 2
Query:  149 TIEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYHVEDGHTLHMVVRQPV-----------TSSSDGTH---NLPGT----SRSHGNHVAPSVVIETFNLPDRGDGV 493
            ++E+ +KTLDSQT T  V  Q+ V   KE IA+   + SE+QRLI +G+VL+DD+ L  Y+V  G  +H+V R P            T S+  TH   + PGT    +  H  +    V++ TFNLP  G  V
Sbjct:   16 SLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNV-GGKVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAV 147          
BLAST of EY727741 vs. ExPASy Swiss-Prot
Match: DSK2_SCHPO (Deubiquitination-protection protein dph1 OS=Schizosaccharomyces pombe GN=dph1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.308e-11
Identity = 38/94 (40.43%), Postives = 54/94 (57.45%), Query Frame = 2
Query:  146 TTIEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYHVEDGHTLHMV------VRQPVTSSSDGTHNLP 409
            T I + IK  + Q Y + VD +  V ALKE IA V  +  E+QRLI  G+VLKD++ L  Y ++DGH++H+V           T+ SD T  +P
Sbjct:    2 TNISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYKIQDGHSIHLVKTLGQNPAAAATNVSDRTQQVP 95          
The following BLAST results are available for this feature:
BLAST of EY727741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
BAT3_RAT3.678e-1439.10Large proline-rich protein BAT3 OS=Rattus norvegic... [more]
BAT3_MOUSE4.804e-1439.10Large proline-rich protein BAT3 OS=Mus musculus GN... [more]
BAT3_HUMAN2.384e-1338.35Large proline-rich protein BAT3 OS=Homo sapiens GN... [more]
DSK2_SCHPO1.308e-1140.43Deubiquitination-protection protein dph1 OS=Schizo... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-105-B03-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727741 ID=EY727741; Name=EY727741; organism=Citrus sinensis; type=EST; length=980bp
CTGACCTCATCTGGGGTCCCTCCTCCTCTCTCGCTCTGTCTTCTACATCT
CCAAATCATTACTATCTGATCTCAGGTATCTGAACGGTCAGCAGAGAATG
GAGAGTCGTGGTACTGTTAAAATTCCTGGGGCTGAAAGTTCTGAAACCAC
CATTGAAATTAAGATAAAAACACTAGATTCACAAACCTATACTTTGAGAG
TTGATAAACAGGTACCAGTTCCTGCTTTGAAAGAGCAGATTGCTTCTGTC
ACGGGTGTGTTATCGGAGCAACAACGTCTAATATGTCGTGGAAAGGTTCT
AAAAGATGATCAACTCCTCTCAGCCTACCATGTTGAGGATGGCCACACCT
TGCATATGGTGGTCAGGCAACCAGTTACATCATCATCTGATGGCACCCAT
AATCTTCCAGGTACAAGCCGCAGCCATGGTAATCATGTAGCCCCTAGTGT
TGTAATTGAAACTTTCAATCTTCCTGATCGAGGAGATGGAGTTCCTTTCA
AAAATCATCAGATTGTGTCGGCTGTTCTGGGCTCTTTTGGTCTTTCAAAT
TTTGGAAGTGGTGGGGGTGGGAAAGATCTCAGGGAAACTGCCATGGCAAG
AACCCGAAGGGGACTCAAAAGCTGGGAGTGGCATTAAACTCGGCCCCATC
CACAACCCTGGAAAAGGGGGGGAACAGGGGTTTCATCCAATTCACCCCCA
ATAGGCTTTTTGGGAATTCCCAAAAGCAAATTTTCTTTGGGGGAATTTTG
CACCCTCCCGGGTAAAACCGGATTTTTTTTGAAAAACCTTTGTCCCCAAT
TTTTTAAATTCCATTTGGGGGGGCCAAAATTTTTGTGGGGGAAAAAGGGG
GGGAAAGGGGGGGGGGGGGAACACACAACCCCGCGCGTGCCCCTAAAAAA
TTAATACCCACTATAAAAAAAGAGGGAGAAAAACACCCAAAATCTCCCCT
GCCCCTTTTCTTCCCCACTCCCTCCGCGGG
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