EY753996

Overview
NameEY753996
Unique NameEY753996
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY753996 vs. ExPASy Swiss-Prot
Match: PGR5_ARATH (Protein PROTON GRADIENT REGULATION 5, chloroplastic OS=Arabidopsis thaliana GN=PGR5 PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.032e-40
Identity = 89/135 (65.93%), Postives = 107/135 (79.26%), Query Frame = 1 
Query:  148 MAATSVCVAG-----LSSSFHGSWGASFANGGEEYR-MLARSVPNVRVAR----PIRMQPMMGNINEGKGIFAPVVVLTRNIIGKKRFNQFRGKAIALHSQVITEFCKSIGADAKQRQGLIRLAKKNGERLGFLA 522
            MAA S+   G     + +SF+G WG+S +  GE+Y+ ML+++V   + AR     IR  PMM N+NEGKG+FAP+VV+TRN++GKKRFNQ RGKAIALHSQVITEFCKSIGADAKQRQGLIRLAKKNGERLGFLA
Sbjct:    1 MAAASISAIGCNQTLIGTSFYGGWGSSIS--GEDYQTMLSKTVAPPQQARVSRKAIRAVPMMKNVNEGKGLFAPLVVVTRNLVGKKRFNQLRGKAIALHSQVITEFCKSIGADAKQRQGLIRLAKKNGERLGFLA 133
The following BLAST results are available for this feature:
BLAST of EY753996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PGR5_ARATH4.032e-4065.93Protein PROTON GRADIENT REGULATION 5, chloroplasti... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-009-D04-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753996 ID=EY753996; Name=EY753996; organism=Citrus sinensis; type=EST; length=717bp
CCGNATTACAAGCTCGACCCACGCGTCCGGCACAACCCTANAACCACAAA
CAAGCTAGCAAACCCTCTGAGCCTCCTTCACTGAAAGCACAAGCTATTTG
TGTGTGTGTGTGTGTGCGTGCGTGCGTGCGTGTTGAGCGTTTCAATTATG
GCTGCTACATCAGTGTGTGTAGCTGGGTTATCATCTTCGTTTCATGGAAG
CTGGGGAGCTTCGTTTGCTAATGGTGGTGAAGAATACAGGATGTTGGCAA
GATCAGTGCCGAATGTTAGAGTGGCAAGACCCATTAGAATGCAACCGATG
ATGGGGAACATTAATGAAGGCAAAGGCATTTTTGCTCCTGTTGTTGTTCT
CACTCGTAATATCATTGGCAAGAAGAGGTTCAATCAGTTTAGAGGCAAAG
CTATTGCCTTGCATTCTCAGGTAATTACTGAATTCTGCAAATCAATAGGA
GCTGATGCAAAGCAAAGGCAAGGCCTCATCCGTTTGGCTAAGAAGAATGG
AGAAAGACTTGGCTTCCTTGCATGATAAGAAAAACATTTATTGTTTTGTA
TTGTTATAACCATGAGATGTTTTAAGTTTATAGTTTTTTCAAGTGCTTTC
TAATGTAAACATACTTTTCTTCAGCTGGGTGTGTCCCAGAAATAGAATGT
AACCTAAGATTAATCCNNNANAAAAAAAAAAANNNNNNNAAAAAAAAAAA
NNNAAAAAAAAAAAAAA
back to top