EY727711

Overview
NameEY727711
Unique NameEY727711
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1042
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY727711 vs. ExPASy Swiss-Prot
Match: HDG1_ARATH (Homeobox-leucine zipper protein HDG1 OS=Arabidopsis thaliana GN=HDG1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.630e-15
Identity = 42/50 (84.00%), Postives = 44/50 (88.00%), Query Frame = 2
Query:   32 GSSNESGGCLLTVGFQILVNSLPTAKLTVESVETVNNLISCTIQKIKAAV 181
            G   E GG LLTV FQILVNSLPTAKLTVESVETVNNLISCT+QKIKAA+
Sbjct:  754 GGCMEEGGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAAL 803          
BLAST of EY727711 vs. ExPASy Swiss-Prot
Match: HDG7_ARATH (Homeobox-leucine zipper protein HDG7 OS=Arabidopsis thaliana GN=HDG7 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 8.086e-15
Identity = 43/61 (70.49%), Postives = 49/61 (80.33%), Query Frame = 2
Query:    5 ASGTMVKTEGS--SNESGGCLLTVGFQILVNSLPTAKLTVESVETVNNLISCTIQKIKAAV 181
            +S     T+G   + ES GCLLTVGFQILVNSLPTAKL VESVETVNNLI+CTI KI+AA+
Sbjct:  618 SSSDQFDTDGGLVNQESKGCLLTVGFQILVNSLPTAKLNVESVETVNNLIACTIHKIRAAL 678          
BLAST of EY727711 vs. ExPASy Swiss-Prot
Match: ANL2_ARATH (Homeobox-leucine zipper protein ANTHOCYANINLESS 2 OS=Arabidopsis thaliana GN=ANL2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.525e-13
Identity = 38/44 (86.36%), Postives = 42/44 (95.45%), Query Frame = 2
Query:   50 GGCLLTVGFQILVNSLPTAKLTVESVETVNNLISCTIQKIKAAV 181
            GG LLTV FQILVN+LPTAKLTVESVETVNNLISCT+QKI+AA+
Sbjct:  755 GGSLLTVAFQILVNNLPTAKLTVESVETVNNLISCTVQKIRAAL 798          
BLAST of EY727711 vs. ExPASy Swiss-Prot
Match: ROC5_ORYSJ (Homeobox-leucine zipper protein ROC5 OS=Oryza sativa subsp. japonica GN=ROC5 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 4.437e-13
Identity = 38/46 (82.61%), Postives = 42/46 (91.30%), Query Frame = 2
Query:   44 ESGGCLLTVGFQILVNSLPTAKLTVESVETVNNLISCTIQKIKAAV 181
            E+GG LLTV FQILVN+ PTAKLTVESVETVNNLISCTI+KIK A+
Sbjct:  755 ETGGSLLTVAFQILVNNQPTAKLTVESVETVNNLISCTIKKIKTAL 800          
BLAST of EY727711 vs. ExPASy Swiss-Prot
Match: ROC6_ORYSJ (Homeobox-leucine zipper protein ROC6 OS=Oryza sativa subsp. japonica GN=ROC6 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.756e-12
Identity = 37/50 (74.00%), Postives = 45/50 (90.00%), Query Frame = 2
Query:   32 GSSNESGGCLLTVGFQILVNSLPTAKLTVESVETVNNLISCTIQKIKAAV 181
            G SN +G  L+TV FQILVN+LPTAKLTVESV+TV+NL+SCTIQKIK+A+
Sbjct:  817 GGSNNTGS-LVTVAFQILVNNLPTAKLTVESVDTVSNLLSCTIQKIKSAL 865          
BLAST of EY727711 vs. ExPASy Swiss-Prot
Match: ROC4_ORYSJ (Homeobox-leucine zipper protein ROC4 OS=Oryza sativa subsp. japonica GN=ROC4 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.756e-12
Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 2
Query:   32 GSSNESGGCLLTVGFQILVNSLPTAKLTVESVETVNNLISCTIQKIKAAV 181
            G+ ++ GG LLTV FQIL NS P+AKLTVESVETV+NLISCTI+KIK A+
Sbjct:  760 GADHKMGGSLLTVAFQILANSQPSAKLTVESVETVSNLISCTIKKIKTAL 809          
BLAST of EY727711 vs. ExPASy Swiss-Prot
Match: ROC1_ORYSJ (Homeobox-leucine zipper protein ROC1 OS=Oryza sativa subsp. japonica GN=ROC1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.252e-11
Identity = 33/51 (64.71%), Postives = 42/51 (82.35%), Query Frame = 2
Query:   29 EGSSNESGGCLLTVGFQILVNSLPTAKLTVESVETVNNLISCTIQKIKAAV 181
            E  S   GG LLTV FQILV+S+PTAKL++ SV TVN+LI+CT+++IKAAV
Sbjct:  727 ENGSGSGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAV 777          
The following BLAST results are available for this feature:
BLAST of EY727711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
HDG1_ARATH3.630e-1584.00Homeobox-leucine zipper protein HDG1 OS=Arabidopsi... [more]
HDG7_ARATH8.086e-1570.49Homeobox-leucine zipper protein HDG7 OS=Arabidopsi... [more]
ANL2_ARATH1.525e-1386.36Homeobox-leucine zipper protein ANTHOCYANINLESS 2 ... [more]
ROC5_ORYSJ4.437e-1382.61Homeobox-leucine zipper protein ROC5 OS=Oryza sati... [more]
ROC6_ORYSJ3.756e-1274.00Homeobox-leucine zipper protein ROC6 OS=Oryza sati... [more]
ROC4_ORYSJ3.756e-1272.00Homeobox-leucine zipper protein ROC4 OS=Oryza sati... [more]
ROC1_ORYSJ9.252e-1164.71Homeobox-leucine zipper protein ROC1 OS=Oryza sati... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-104-F10-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727711 ID=EY727711; Name=EY727711; organism=Citrus sinensis; type=EST; length=1042bp
CCACGCGTCCGGGACAATGGTCAAAACTGAGGGCAGCAGTAATGAAAGTG
GCGGATGCCTCCTTACCGTTGGATTTCAGATTTTGGTGAACAGCCTTCCA
ACTGCCAAACTGACAGTAGAATCAGTTGAGACCGTTAACAATCTCATCTC
CTGCACAATTCAAAAGATCAAAGCAGCTGTTCTAGAAACATAGCTGTGGG
AGATAGGTAACTGTGTGCTGCATAGCTTAGTTGATCCTTTTTCTTTTTGT
TTTTTGAAAATCAAATCATATATGTGAAAAGTATAGGAGATATAGAATGG
ACATGGAAAAGCTTGATAGTCGAGATGATAATTCCCGTAATTAGAGGGGT
TTCGAGTCAAGAACGAACCGCATGTGGAGAATTTTTGCTGGGCTGTGGAT
CTCATTAACTGGAGGGTTTTGTCTTCAAGGTTTGGTATCAGGGCAGTGTA
GTGGTTCGGGTATTGACTCGGTTGACCAGCGAGTTGCTCTGTTTGCAAAA
AGGCCCGATCAGAAGATGTGTTTTTGTTAATTAGTCATCTTTATAAAAAG
ATAACCAAAGCTAGATAACCTTTTAAAGAAACTCCGGAAGGTTTTCTTCT
GGGTTTTGGTTTTTGTTGGAAAAAGGGGTTAATCGGGACTTTGGATATAA
TGGGTTGGTTCCCCTTGGGGGTTTTATACCTAGGCCCCCCAAAAAAAAAT
TTTCCCGTTTTTTCCTTTTCTCTTTTAAAGAAAAAAAAAAAAAAAAAAAT
AAAAAAAAAAAAAAAAAAAAAAAGGGGGGGGCCGCCCCTAAAAGGAACAC
AAGCTTATAAAAACGGCGGGGATAGCGAGGACGCAAAAATCTCTCTTCCA
AAAAGGGCACCCCAAAAATTAAATTTACACGGGGGAGCCACCGTCTTTTT
AAGAAAGCGCCCGGAGACGGGAAGAGAAAACACCCCTCTGGGGAATTTAC
AACGCTCAATTTNGTTTCCCCCCCTTGTGGGTAATCAACAAACAACCCCC
CCCTTTATTTTCCCCTCCAACCACGGTGGATGATATCCGGAC
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