EY753992

Overview
NameEY753992
Unique NameEY753992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY753992 vs. ExPASy Swiss-Prot
Match: ATPG_TOBAC (ATP synthase gamma chain, chloroplastic OS=Nicotiana tabacum GN=ATPC PE=1 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 1.002e-11
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 2 
Query:   62 VTLSC*SLPACCDAALLFLGSFFTPF-VPPPNAS-PINPSRS*SLTPFYCGPLELE*RIGSGQNTRNITQAMQLVA 283
            +T+   S P+  D++ L   S  +PF +P  N S P NPSRS S+TP +CG  +L  RI S +NT+ IT+AM+LVA
Sbjct:    6 LTMLVSSKPSLSDSSALSFRSSVSPFQLPNHNTSGPSNPSRSSSVTPVHCGLRDLRDRIESVKNTQKITEAMKLVA 81

HSP 2 Score: 35.8094 bits (81), Expect = 1.002e-11
Identity = 59/206 (28.64%), Postives = 73/206 (35.44%), Query Frame = 3 
Query:  285 AATVRIAQDPVVYGTPFSETLAEARYCIREPLP*EHI-----------HAALYLITTCRDSCYSLTPLGI*GSSWWLRQQY---YDYCCGYIRQCEDWRTILRYY*WRAEWWCILYFSRLIFLSTHALRHGHYL-LRTDAHTVADDVLILSVS*TVLAEAL*YTKPVWFDYNRACDLHPASTSREGNHLDPKGAGPGAAQDLFFSL 857
            AA VR AQ+ VV   PFSETL E  Y I E L  + I             AL ++T  R  C       I  +   +R       DY    + +  +                  YF R  ++       G  L    DA  +ADDV  L VS  V    L YTK V    +          S +G   D  G    AA D FF L
Sbjct:   82 AAKVRRAQEAVVGARPFSETLVEVLYNINEQLQTDDIDVPLTKVRPVKKVALVVVTGDRGLCGGFNNYLIKKAEARIRDLKALGIDYTIISVGKKGN-----------------SYFIRRPYIPVDKFLEGSNLPTAKDAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSEPVIHTLLPLSPKGEICDINGNCVDAANDEFFRL 270
The following BLAST results are available for this feature:
BLAST of EY753992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ATPG_TOBAC1.002e-1146.05ATP synthase gamma chain, chloroplastic OS=Nicotia... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-009-C11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753992 ID=EY753992; Name=EY753992; organism=Citrus sinensis; type=EST; length=944bp
CGGTCGCCTTTTTTTTGAGTGCTTATACTGTACCCTCCACCTCCGGCCTT
GCGCTATGACTGTGACCTTGTCTTGCTGATCCCTACCTGCGTGTTGTGAC
GCTGCGTTACTTTTTTTAGGCTCATTCTTCACCCCATTTGTGCCTCCTCC
CAATGCCTCCCCCATCAACCCTTCTAGATCTTAATCACTTACTCCCTTTT
ATTGTGGACCGCTCGAGCTCGAATAACGTATTGGGTCTGGACAGAACACA
CGGAACATCACCCAGGCCATGCAGCTCGTGGCTCGCTGCTACAGTCAGAA
TAGCTCAAGACCCTGTAGTCTATGGCACGCCTTTCTCTGAAACTCTTGCC
GAGGCTCGTTACTGCATCAGAGAGCCCCTTCCATGAGAACACATACATGC
TGCTTTGTATCTCATTACGACCTGTCGAGACAGTTGCTATAGCCTGACGC
CACTGGGGATCTGAGGATCGTCGTGGTGGTTGCGTCAGCAGTATTATGAC
TACTGCTGTGGCTATATTCGGCAATGCGAAGACTGGAGGACCATATTACG
CTATTATTAGTGGCGCGCAGAATGGTGGTGCATCCTCTACTTCTCTCGCC
TGATATTCTTGTCGACACATGCGTTGAGGCATGGTCACTACCTACTGCGG
ACTGATGCTCATACTGTAGCAGATGACGTGTTGATACTATCCGTGAGCTG
AACAGTCCTCGCTGAGGCTCTTTAATACACAAAGCCTGTGTGGTTCGATT
ACAACAGAGCTTGTGACTTACACCCCGCCTCCACTTCTCGCGAGGGGAAT
CATCTTGATCCCAAAGGTGCTGGACCCGGGGCTGCCCAGGACTTATTCTT
TTCCTTGGCACTATGGACGAAATTGCCTGTTTTTCCAATAGTAGGAGGAC
GTTACCGATCGTGGCACCCCTCTAGAATTTGGCCAGACGCGGGT
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