EY727706

Overview
NameEY727706
Unique NameEY727706
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length993
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY727706 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 2.584e-31
Identity = 79/168 (47.02%), Postives = 95/168 (56.55%), Query Frame = 2
Query:  113 MCGGAIISGYIPPTVPGRPKKLTAEYLWPELK-------RSSNKKYSKPIVDDDFEADFQGFKXXXXXXXXXXXXXXXXXXXXXXXKPFTFSAGRK----------------SHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFHT 547
            MCGGAIIS +IPP    R  ++T E++WP+LK       + SNK+     +DDDFEADFQGFK                       KPF F+A  K                ++    V+  EQA+KS++RKRKNQYRGIRQRPWGKWAAEIRDP KG R WLGTF T
Sbjct:    1 MCGGAIISDFIPPP---RSLRVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFKDDSAFDCEDDDDVFVNV------KPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDT 159          
BLAST of EY727706 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.757e-31
Identity = 88/206 (42.72%), Postives = 109/206 (52.91%), Query Frame = 2
Query:  113 MCGGAIISGYIPPTVPGRPKKLTAEYLWPELKRS--SNKKYSKPI-----VDDDFEADFQGFKXXXXXXXXXXXXXXXXXXXXXXXKPFTFSAGRK------SHGSTAVKHVE----QAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFHTXXXXXXXXXXXXXXIGGKKS*R*LSKINSRLRLQKTQGKANL*K 679
            MCGGAIIS +IPP    R +++T+E++WP+LK++   +KK SK        D +FEADFQGFK                       KPF F++  K      + GS   K V      A+KS  RKRKNQYRGIRQRPWGKWAAEIRDP +G R+WLGTF T              I G K+     + N +   QK   KANL K
Sbjct:    1 MCGGAIISDFIPPP---RSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFKDDSSIDCDDDFDVGDVFADV---KPFVFTSTPKPAVSAAAEGSVFGKKVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEENMKANSQKRSVKANLQK 200          
BLAST of EY727706 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.800e-23
Identity = 67/176 (38.07%), Postives = 86/176 (48.86%), Query Frame = 2
Query:  113 MCGGAIISGYIPPTVPGRP---KKLTAEYLWPELKR----SSNKKYSKPIV---DDDFEADFQGFKXXXXXXXXXXXXXXXXXXXXXXXKPFTFSAGRKSHGSTAVKHVE-QAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFHTXXXXXXXXXXXXXXIGGKKS 607
            MCGGAII       + G P   ++ T   LWPE K+       +++    V   D+DFEADF+ F+                         F  +  R +  +      +  A KS +RKRKNQ+RGIRQRPWGKWAAEIRDP KGVRVWLGTF++              I GKK+
Sbjct:    1 MCGGAIIHH-----LKGHPEGSRRATEGLLWPEKKKPRWGGGGRRHFGGFVEEDDEDFEADFEEFEVDSGDSDLELGEEDDDDVVEIKPAAFKRALSRDNLSTITTAGFDGPAAKSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKA 171          

HSP 2 Score: 26.5646 bits (57), Expect = 5.800e-23
Identity = 17/43 (39.53%), Postives = 21/43 (48.84%), Query Frame = 3
Query:  597 GKKAKGNFPK*TPGCGSKKLRGRQTSKKSISQSLG*PPGHPSF 725
            GKKAK NFP+  P    K+  G  T+K   S     P   P+F
Sbjct:  168 GKKAKVNFPE-APTTAQKRRAGSTTAKAPKSSVEQKPTVKPAF 209          
BLAST of EY727706 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.203e-20
Identity = 61/145 (42.07%), Postives = 71/145 (48.97%), Query Frame = 2
Query:  113 MCGGAIISGYIPPTVPGRPKKLTAEYLWPELKRSSNKKYSKPIVDDDFEADFQGFKXXXXXXXXXXXXXXXXXXXXXXXKPFTFSAGRKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFHT 547
            MCGGAIIS Y P     + +KLTAE LW EL  S+          DDF   +   K                               + +    AVK  +  +    RKRKN YRGIR+RPWGKWAAEIRDP KGVRVWLGTF+T
Sbjct:    1 MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAA---------DDFWGFYSTSKLHP--------------------------TNQVNVKEEAVKKEQATEPGKRRKRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNT 110          
BLAST of EY727706 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.683e-14
Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 2
Query:  419 KKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFHTXXXXXXXXXXXXXXIGGKKS 607
            ++  +R+RKN YRGIRQRPWGKWAAEIRDP+KGVRVWLGTF T              I G+K+
Sbjct:   39 ERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKA 101          
BLAST of EY727706 vs. ExPASy Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.233e-13
Identity = 36/64 (56.25%), Postives = 43/64 (67.19%), Query Frame = 2
Query:  359 TFSAGRKSHGSTAVKHVEQAKKSTERK-RKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFHT 547
            T S+ R+   S   K  E   K  +RK +KN YRG+RQRPWGK+AAEIRDP +  RVWLGTF T
Sbjct:  104 TSSSNRRRESSPVAKKAEGGGKIRKRKNKKNGYRGVRQRPWGKFAAEIRDPKRATRVWLGTFET 167          
BLAST of EY727706 vs. ExPASy Swiss-Prot
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.817e-12
Identity = 28/39 (71.79%), Postives = 37/39 (94.87%), Query Frame = 2
Query:  431 ERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFHT 547
            ++K+ ++Y+GIR+RPWG+WAAEIRDP KGVRVWLGTF+T
Sbjct:   18 KKKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNT 56          
BLAST of EY727706 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.817e-12
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = 2
Query:  410 EQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFHT 547
            +Q +   ++ R+  YRG+RQRPWGKWAAEIRDP K  RVWLGTF T
Sbjct:   25 DQHQPDQDQPRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFET 70          
BLAST of EY727706 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 7.817e-12
Identity = 33/65 (50.77%), Postives = 43/65 (66.15%), Query Frame = 2
Query:  353 PFTFSAGRKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFHT 547
            P +F+    SH     + + +A     R++K +YRG+RQRPWGKWAAEIRDP +  RVWLGTF T
Sbjct:   45 PSSFARVDSSHNPIE-ESMSKAFPEEAREKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDT 108          
BLAST of EY727706 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.021e-11
Identity = 35/54 (64.81%), Postives = 38/54 (70.37%), Query Frame = 2
Query:  386 GSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFHT 547
            GS   K  E +  S ER +K  YRG+RQRPWGKWAAEIRDP K  RVWLGTF T
Sbjct:   42 GSAVTKECESSM-SLERPKK--YRGVRQRPWGKWAAEIRDPHKATRVWLGTFET 92          
The following BLAST results are available for this feature:
BLAST of EY727706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
RAP22_ARATH2.584e-3147.02Ethylene-responsive transcription factor RAP2-2 OS... [more]
RA212_ARATH5.757e-3142.72Ethylene-responsive transcription factor RAP2-12 O... [more]
ERF1_ORYSJ5.800e-2338.07Ethylene-responsive transcription factor 1 OS=Oryz... [more]
RAP23_ARATH1.203e-2042.07Ethylene-responsive transcription factor RAP2-3 OS... [more]
ERF71_ARATH1.683e-1458.73Ethylene-responsive transcription factor ERF071 OS... [more]
EF109_ARATH9.233e-1356.25Ethylene-responsive transcription factor ERF109 OS... [more]
ERF73_ARATH7.817e-1271.79Ethylene-responsive transcription factor ERF073 OS... [more]
EF113_ARATH7.817e-1263.04Ethylene-responsive transcription factor ERF113 OS... [more]
EF110_ARATH7.817e-1250.77Ethylene-responsive transcription factor ERF110 OS... [more]
RAP26_ARATH1.021e-1164.81Ethylene-responsive transcription factor RAP2-6 OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-104-F04-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727706 ID=EY727706; Name=EY727706; organism=Citrus sinensis; type=EST; length=993bp
CAAAACTCTCTCAAGCCAACAAAAGCAAATTTTTACATTTAACCCATTCT
CTTCTAAAAATCTTTTCTCTTTAGTCCCTGAACAAACCAGAAGAAACGAT
AAACCCTTAACCATGTGTGGAGGTGCTATCATTTCGGGCTACATCCCGCC
CACCGTGCCGGGCCGTCCAAAGAAGCTGACGGCGGAGTATCTCTGGCCGG
AGCTGAAGAGGTCATCCAACAAGAAGTACTCAAAGCCGATCGTCGACGAT
GATTTCGAGGCTGATTTCCAAGGATTCAAGGACGATGAAGAAGAGTCTGA
CATTGATGGTGACGTGGACGTTGATGCCGACTTGATGATGGCTGATATTA
AGCCTTTTACTTTCTCAGCTGGTCGCAAGTCTCATGGATCTACAGCCGTG
AAGCACGTTGAACAAGCTAAAAAATCCACAGAAAGAAAGAGGAAGAATCA
ATATAGGGGAATTAGGCAGCGTCCATGGGGAAAATGGGCTGCTGAGATCC
GTGACCCCACAAAGGGGGTTCGTGTCTGGCTAGGAACTTTTCATACCGCT
GAAGAAGCCGCTAGGGCTTATGATGCCGAGGCACGGAGGATCGGTGGGAA
AAAAAGCTAAAGGTAACTTTCCAAAATAAACTCCCGGCTGCGGCTCCAAA
AAACTCAGGGGAAGGCAAACCTCTAAAAAATCCATTTCCCAAAGTTTGGG
CTAACCCCCCGGGCACCCAAGTTTTGAAACCAAAAAATTTCCAATTATTT
GAAACACCCCCAAATAAGGGATTTACAAAAAAAAAGGGTGAGATTTTTTG
GGGGAGAAAAAAACCCCCAAGGGAAAACCAAATAGGGGAAATTTTGGGGC
CCCCCTTCCCCCCATATGGGAGGGGGAAAAAAAAATAGGATATTTCAAAC
CCCCTTTTTGTGGGCCCCCCAACACCCTGTTAGAAAGAAAAACCCCTCCC
TTTTTTTTTTGTTATCATCTTCTCACACCCCCCTCTCCGGCAA
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