EY727697

Overview
NameEY727697
Unique NameEY727697
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1009
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY727697 vs. ExPASy Swiss-Prot
Match: IF5A2_SOLLC (Eukaryotic translation initiation factor 5A-2 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 1.064e-80
Identity = 144/159 (90.57%), Postives = 151/159 (94.97%), Query Frame = 1 
Query:   64 MSDEEHHFESKADAGASKTLPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSIQWAMGEEQIHALKDIGPK 540
            MSDEEHHFESKADAGASKT PQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTE+GNTKDDLRLPTDENLL Q+KDGF+ GKDLVVS+  AMGEEQI+A+KD+G K
Sbjct:    1 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGNTKDDLRLPTDENLLKQVKDGFQEGKDLVVSVMSAMGEEQINAVKDVGTK 159
[Close]
BLAST of EY727697 vs. ExPASy Swiss-Prot
Match: IF5A_MANES (Eukaryotic translation initiation factor 5A OS=Manihot esculenta PE=2 SV=2)

HSP 1 Score: 300.056 bits (767), Expect = 1.389e-80
Identity = 146/159 (91.82%), Postives = 150/159 (94.34%), Query Frame = 1 
Query:   64 MSDEEHHFESKADAGASKTLPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSIQWAMGEEQIHALKDIGPK 540
            MSDEEHHFESKADAGASKT PQQAGTIRKNGYIVIK RPCKV+EVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTE GNTKDDLRLPTDENLLSQIKDGF  GKDLVVS+  AMGEE+I +LKDIGPK
Sbjct:    1 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVMEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVSVMSAMGEERICSLKDIGPK 159
[Close]
BLAST of EY727697 vs. ExPASy Swiss-Prot
Match: IF5A3_SOLTU (Eukaryotic translation initiation factor 5A-3 OS=Solanum tuberosum GN=EIF5A3 PE=2 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 3.095e-80
Identity = 144/159 (90.57%), Postives = 151/159 (94.97%), Query Frame = 1 
Query:   64 MSDEEHHFESKADAGASKTLPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSIQWAMGEEQIHALKDIGPK 540
            MSDEEHHFESKADAGASKT PQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTE+GNTKDDLRLPTDE+LL Q+KDGF+ GKDLVVS+  AMGEEQI+A+KDIG K
Sbjct:    1 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGNTKDDLRLPTDESLLKQVKDGFQEGKDLVVSVMSAMGEEQINAIKDIGTK 159
[Close]
BLAST of EY727697 vs. ExPASy Swiss-Prot
Match: IF5A3_SOLLC (Eukaryotic translation initiation factor 5A-3 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 5.279e-80
Identity = 146/159 (91.82%), Postives = 149/159 (93.71%), Query Frame = 1 
Query:   64 MSDEEHHFESKADAGASKTLPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSIQWAMGEEQIHALKDIGPK 540
            MSDEEH FESKADAGASKT PQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIF GKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLT+NGNTKDDLRLPTDENLLS IKDGF  GKDLVVS+  AMGEEQI+ALKDIGPK
Sbjct:    1 MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTDENLLSLIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159
[Close]
BLAST of EY727697 vs. ExPASy Swiss-Prot
Match: IF5A2_NICPL (Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia GN=EIF-5A2 PE=2 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 2.006e-79
Identity = 145/159 (91.19%), Postives = 149/159 (93.71%), Query Frame = 1 
Query:   64 MSDEEHHFESKADAGASKTLPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSIQWAMGEEQIHALKDIGPK 540
            MSDEEH FESKADAGASKT PQQAGTIRKNG+IVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIF GKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD+NLL+QIKDGF  GKDLVVS+  AMGEEQI ALKDIGPK
Sbjct:    1 MSDEEHQFESKADAGASKTYPQQAGTIRKNGHIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159
[Close]
BLAST of EY727697 vs. ExPASy Swiss-Prot
Match: IF5A4_SOLTU (Eukaryotic translation initiation factor 5A-4 OS=Solanum tuberosum GN=EIF5A4 PE=2 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 2.620e-79
Identity = 144/159 (90.57%), Postives = 150/159 (94.34%), Query Frame = 1 
Query:   64 MSDEEHHFESKADAGASKTLPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSIQWAMGEEQIHALKDIGPK 540
            MSDEEH FESKADAGASKT PQQAGTIRK+GYIVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIF GKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLT+NGNTKDDLRLPTD++LLSQIKDGF  GKDLVVS+  AMGEEQI+ALKDIGPK
Sbjct:    1 MSDEEHQFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTDDSLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159
[Close]
BLAST of EY727697 vs. ExPASy Swiss-Prot
Match: IF5A4_SOLLC (Eukaryotic translation initiation factor 5A-4 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 2.218e-78
Identity = 142/159 (89.31%), Postives = 148/159 (93.08%), Query Frame = 1 
Query:   64 MSDEEHHFESKADAGASKTLPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSIQWAMGEEQIHALKDIGPK 540
            MSDEEHHFESKADAGASKT PQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIFN KKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD+ LL+Q+K GFE GKDLV+S+  AMGEEQI A+KDIG K
Sbjct:    1 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDTLLNQVKGGFEEGKDLVLSVMSAMGEEQICAVKDIGTK 159
[Close]
BLAST of EY727697 vs. ExPASy Swiss-Prot
Match: IF5A1_SOLTU (Eukaryotic translation initiation factor 5A-1/2 OS=Solanum tuberosum GN=EIF5A1 PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 2.897e-78
Identity = 142/159 (89.31%), Postives = 149/159 (93.71%), Query Frame = 1 
Query:   64 MSDEEHHFESKADAGASKTLPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSIQWAMGEEQIHALKDIGPK 540
            MSDEEHHFESKADAGASKT PQQAGTIRK+GYIVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD+ LL+Q+K GFE GKDLV+S+  AMGEEQI A+KDIG K
Sbjct:    1 MSDEEHHFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDALLNQVKGGFEEGKDLVLSVMSAMGEEQICAVKDIGTK 159
[Close]
BLAST of EY727697 vs. ExPASy Swiss-Prot
Match: IF5A2_MEDSA (Eukaryotic translation initiation factor 5A-2 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 8.429e-78
Identity = 141/159 (88.68%), Postives = 148/159 (93.08%), Query Frame = 1 
Query:   64 MSDEEHHFESKADAGASKTLPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSIQWAMGEEQIHALKDIGPK 540
            MSDEEHHFE  ADAGASKT PQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLT+NG+TKDDL+LPTD++LL+QIKDGF  GKDLVVS+  AMGEEQI ALKDIGPK
Sbjct:    1 MSDEEHHFEPAADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGSTKDDLKLPTDDSLLTQIKDGFADGKDLVVSVMSAMGEEQICALKDIGPK 159
[Close]
BLAST of EY727697 vs. ExPASy Swiss-Prot
Match: IF5A1_TOBAC (Eukaryotic translation initiation factor 5A-1 OS=Nicotiana tabacum GN=EIF-5A1 PE=3 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 1.101e-77
Identity = 140/159 (88.05%), Postives = 147/159 (92.45%), Query Frame = 1 
Query:   64 MSDEEHHFESKADAGASKTLPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSIQWAMGEEQIHALKDIGPK 540
            MSDEEHHFESKADAGASKT PQQAGTIRKNG+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF GKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD+NLL+ IKDGF  GKDLV+S+  AMGEEQI  +KD+GPK
Sbjct:    1 MSDEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLALIKDGFAEGKDLVLSVMSAMGEEQICGIKDVGPK 159
The following BLAST results are available for this feature:
BLAST of EY727697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
IF5A2_SOLLC1.064e-8090.57Eukaryotic translation initiation factor 5A-2 OS=S... [more]
IF5A_MANES1.389e-8091.82Eukaryotic translation initiation factor 5A OS=Man... [more]
IF5A3_SOLTU3.095e-8090.57Eukaryotic translation initiation factor 5A-3 OS=S... [more]
IF5A3_SOLLC5.279e-8091.82Eukaryotic translation initiation factor 5A-3 OS=S... [more]
IF5A2_NICPL2.006e-7991.19Eukaryotic translation initiation factor 5A-2 OS=N... [more]
IF5A4_SOLTU2.620e-7990.57Eukaryotic translation initiation factor 5A-4 OS=S... [more]
IF5A4_SOLLC2.218e-7889.31Eukaryotic translation initiation factor 5A-4 OS=S... [more]
IF5A1_SOLTU2.897e-7889.31Eukaryotic translation initiation factor 5A-1/2 OS... [more]
IF5A2_MEDSA8.429e-7888.68Eukaryotic translation initiation factor 5A-2 OS=M... [more]
IF5A1_TOBAC1.101e-7788.05Eukaryotic translation initiation factor 5A-1 OS=N... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-104-E02-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727697 ID=EY727697; Name=EY727697; organism=Citrus sinensis; type=EST; length=1009bp
TTCGATTCTACCAAAATTTGGTTCGCTCTAAGCTCTAATTGTGAATCGCA
GGAACCAGACGATATGTCGGACGAAGAGCACCACTTTGAGTCGAAGGCCG
ACGCCGGCGCCTCCAAGACATTACCTCAGCAGGCCGGAACCATCCGCAAA
AACGGTTATATCGTCATCAAAGGTCGTCCTTGCAAGGTTGTTGAGGTTTC
AACTTCCAAGACTGGAAAGCACGGTCATGCTAAGTGTCACTTTGTAGGAA
TTGACATCTTCAATGGCAAGAAGCTTGAGGATATTGTTCCCTCTTCCCAC
AACTGTGATGTTCCTCATGTCACTCGCACTGACTACCAGCTGATTGATAT
CTCTGAGGATGGATTTGTTAGCCTGCTGACTGAGAATGGCAATACCAAGG
ATGACCTGAGACTTCCAACTGATGAAAATCTGCTTTCACAGATCAAGGAT
GGATTTGAGAGTGGGAAAGATCTGGTTGTCTCAATTCAGTGGGCTATGGG
AGAGGAACAGATCCATGCCCTGAAGGACATTGGCCCCAAGTAAAAACTTT
TGGTTGATCAAAAATGCAAATTGCTGAAAGCTGTGGGAAGGGGGAAAGAA
TTGGAACTTTACTGGGGGCCCGGTTCCAAAAGAATGGCCTCCTTTTCAAA
AAAAAAGGGCCCCTTACCCAAATTAATTAATGGGTTTTCCAACGAACGGG
TATTTTTAATTTCCCGTTTTGAATGGGTTGGAAAATTTGAAAAAAGGGGT
TGTTCCTCGGGGGGGGGAAAAATTTGGAACCCCCCCCCAACGGGGACGGG
AAAAAAACCCTTTTCAAAGACCCCCTTTTTGGGGGGGGTTTCAAAAAAAG
GGCGATTTTTAGCAGCTTTTCCGGGGGGGGGGACAAAAAAAACAACACGA
AAATAACAAATTTAAAAAGGAACTAAATAAGAAAAAAAAAACGGAAAAAT
AAAGAAAACACACAAAATATAAATACGAGGGGGGGGGGGGGGCCGCCGCC
CCCCCCTTA
back to top