EY753983

Overview
NameEY753983
Unique NameEY753983
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length965
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753983 vs. ExPASy Swiss-Prot
Match: USP_CUCME (UDP-sugar pyrophospharylase OS=Cucumis melo GN=USP PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 9.383e-39
Identity = 89/159 (55.97%), Postives = 107/159 (67.30%), Query Frame = 2
Query:  359 MASTVCSAAEQLSKLGIDGAFADSAPNFKKNXXXXXXXXXXXXKMLMEMGQSLLFEKWAAPGGDDDEK*AFFDQVAKLNSSYPGGLKSYMKTGLVLLADSKAGKNPCDGFTLFVPTVEIVQF*DATFISSEHARV*QAKNAALCSG*GGAGERPRYHGL 835
            MAS++ SAA  LS L I+G FA S PN +KN            K+L+E+GQS LFE WA PG DD+EK AFFDQVA+LNSSYPGGL SY+KT   LLADSK GKNP DGFT  VPT E++ F D +F+S E   V +A+ AA     GG GER  Y+G+
Sbjct:    1 MASSLDSAALTLSNLSINGDFASSLPNLQKNLHLLSPQQVELAKILLELGQSHLFEHWAEPGVDDNEKKAFFDQVARLNSSYPGGLASYIKTARGLLADSKEGKNPFDGFTPSVPTGEVLTFGDDSFVSFEDRGVREARKAAFVLVAGGLGERLGYNGI 159          
BLAST of EY753983 vs. ExPASy Swiss-Prot
Match: USP_ORYSI (UDP-sugar pyrophosphorylase OS=Oryza sativa subsp. indica GN=USP PE=3 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 1.604e-30
Identity = 76/161 (47.20%), Postives = 97/161 (60.25%), Query Frame = 2
Query:  377 SAAEQLSKLGIDGAFADS-APNFKKNXXXXXXXXXXXXKMLMEMGQSLLFEKWAAPGGDDDEK*AFFDQVAKLNSSYPGGLKSYMKTGLVLLADSKAGKNPCDGFTLFVPTVEIVQF*DATFISSEHARV*QAKNAALCSG*GGAGERPRYHGLTRLLRRK 856
            + A  ++ LGI G   D  AP  ++N            K+L+  GQS LFE W  PG DDD+K  FFDQV +LNSSYPGGL SY++    LLADSKAGKNP DGF+  VP+ E++ F D  F+S E A V +A++AA     GG GER  Y G+   L R+
Sbjct:    6 NGAAAVAALGISGGGGDDWAPPLRRNLPLLAPHEVKLAKLLLSEGQSHLFEHWPEPGVDDDKKRNFFDQVCRLNSSYPGGLASYIQNARKLLADSKAGKNPYDGFSPSVPSGEVLTFGDDNFVSLEEAGVKEARHAAFVLVAGGLGERLGYKGIKVALPRE 166          
BLAST of EY753983 vs. ExPASy Swiss-Prot
Match: USP_ORYSJ (UDP-sugar pyrophosphorylase OS=Oryza sativa subsp. japonica GN=USP PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.095e-30
Identity = 76/159 (47.80%), Postives = 96/159 (60.38%), Query Frame = 2
Query:  383 AEQLSKLGIDGAFADS-APNFKKNXXXXXXXXXXXXKMLMEMGQSLLFEKWAAPGGDDDEK*AFFDQVAKLNSSYPGGLKSYMKTGLVLLADSKAGKNPCDGFTLFVPTVEIVQF*DATFISSEHARV*QAKNAALCSG*GGAGERPRYHGLTRLLRRK 856
            A  ++ LGI G   D  AP  ++N            K+L+  GQS LFE W  PG DDD+K  FFDQV +LNSSYPGGL SY++    LLADSKAGKNP DGF+  VP+ E++ F D  F+S E A V +A++AA     GG GER  Y G+   L R+
Sbjct:    8 AAAVAALGISGGGGDDWAPPLRRNLPLLAPHEVKLAKLLLSEGQSHLFEHWPEPGVDDDKKRNFFDQVCRLNSSYPGGLASYIQNARKLLADSKAGKNPYDGFSPSVPSGEVLTFGDDNFVSLEEAGVKEARHAAFVLVAGGLGERLGYKGIKVALPRE 166          
BLAST of EY753983 vs. ExPASy Swiss-Prot
Match: USP_ARATH (UDP-sugar pyrophosphorylase OS=Arabidopsis thaliana GN=USP PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.706e-28
Identity = 71/150 (47.33%), Postives = 88/150 (58.67%), Query Frame = 2
Query:  407 IDGAFADSAPNFKKNXXXXXXXXXXXXKMLMEMGQSLLFEKWAAPGGDDDEK*AFFDQVAKLNSSYPGGLKSYMKTGLVLLADSKAGKNPCDGFTLFVPTVEIVQF*DATFISSEHARV*QAKNAALCSG*GGAGERPRYHGLTRLLRRK 856
            +D  F  S P    N            K+L+E GQS LF++W   G DD EK AFFDQ+A+LNSSYPGGL +Y+KT   LLADSK GKNP DGF+  VP+ E + F    FI  E   V +A+NAA     GG GER  Y+G+   L R+
Sbjct:    5 VDSNFFSSVPALHSNLGLLSPDQIELAKILLENGQSHLFQQWPELGVDDKEKLAFFDQIARLNSSYPGGLAAYIKTAKELLADSKVGKNPYDGFSPSVPSGENLTFGTDNFIEMEKRGVVEARNAAFVLVAGGLGERLGYNGIKVALPRE 154          
BLAST of EY753983 vs. ExPASy Swiss-Prot
Match: USP1_SOYBN (UDP-sugar pyrophosphorylase 1 OS=Glycine max GN=USP1 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.397e-26
Identity = 63/116 (54.31%), Postives = 77/116 (66.38%), Query Frame = 2
Query:  488 KMLMEMGQSLLFEKWAAPGGDDDEK*AFFDQVAKLNSSYPGGLKSYMKTGLVLLADSKAGKNPCDGFTLFVPTVEIVQF*DATFISSEHARV*QAKNAALCSG*GGAGERPRYHGL 835
            KML++ GQ  LF  W APG DDD K AFFDQ+ +L+SSYPGGL++Y+     LLADSKAG+NP DGFT  VPT E + F D  +I  E A V +A+ AA     GG GER  Y G+
Sbjct:   21 KMLLDNGQEHLFRDWPAPGVDDDHKNAFFDQLTRLDSSYPGGLEAYITNAKRLLADSKAGRNPFDGFTPSVPTGETLAFGDENYIKFEEAGVLEARKAAFVLVAGGLGERLGYSGI 136          
BLAST of EY753983 vs. ExPASy Swiss-Prot
Match: USP_PEA (UDP-sugar pyrophospharylase OS=Pisum sativum GN=USP PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.650e-25
Identity = 63/116 (54.31%), Postives = 75/116 (64.66%), Query Frame = 2
Query:  488 KMLMEMGQSLLFEKWAAPGGDDDEK*AFFDQVAKLNSSYPGGLKSYMKTGLVLLADSKAGKNPCDGFTLFVPTVEIVQF*DATFISSEHARV*QAKNAALCSG*GGAGERPRYHGL 835
            KML++ GQ  LF  W  PG DDDEK AFFDQ+  L+SSYPGGL +Y+     LLADSKAG NP DGFT  VPT E ++F D  F   E A V +A+ AA     GG GER  Y+G+
Sbjct:   21 KMLLDNGQDHLFRDWPNPGVDDDEKKAFFDQLVLLDSSYPGGLVAYINNAKRLLADSKAGNNPFDGFTPSVPTGETLKFGDENFNKYEEAGVREARRAAFVLVAGGLGERLGYNGI 136          
The following BLAST results are available for this feature:
BLAST of EY753983 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
USP_CUCME9.383e-3955.97UDP-sugar pyrophospharylase OS=Cucumis melo GN=USP... [more]
USP_ORYSI1.604e-3047.20UDP-sugar pyrophosphorylase OS=Oryza sativa subsp.... [more]
USP_ORYSJ2.095e-3047.80UDP-sugar pyrophosphorylase OS=Oryza sativa subsp.... [more]
USP_ARATH5.706e-2847.33UDP-sugar pyrophosphorylase OS=Arabidopsis thalian... [more]
USP1_SOYBN2.397e-2654.31UDP-sugar pyrophosphorylase 1 OS=Glycine max GN=US... [more]
USP_PEA2.650e-2554.31UDP-sugar pyrophospharylase OS=Pisum sativum GN=US... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-009-B11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753983 ID=EY753983; Name=EY753983; organism=Citrus sinensis; type=EST; length=965bp
TTCCAAAATCCGACCCACGCGTCCGCAACCATATCTCTGTATTTTGCTTG
GGTGAATCAAATCCCCAGTAATGTTTGATTATTAAAGTAATAAACTTCTC
GTAAAACGCACGCCGGTGGGTGACCGATTGGGAACAAACATAGGTCAACT
TATTCCGCTTCAAGATCCAGATCGGGAGCTCTTAATATACCGGTTCTATT
TACGTCCACGTGACCATTTGCCATCTACCGCCATCTGCGCTTATAATAAA
ACATTACACCGTAATAAATTCAATTATATGAAAGAAACATTTTTGGAGCA
TCGGTTGCGGCGAGGCGACGACATTGTTTCTTCATTCGTAGTCATAGCAT
AACAGAACATGGCTTCAACGGTCTGTTCAGCCGCTGAGCAGCTCTCCAAG
CTCGGCATAGACGGCGCTTTTGCGGATTCCGCTCCTAATTTTAAAAAGAA
TCTCCATCTCTTATCTTGATAACATGTTGAATTATCGAAGATGCTGATGG
AGATGGGACAGAGTCTTTTGTTTGAGAAGTGGGCGGCTCCTGGAGGTGAT
GACGATGAGAAATGAGCCTTCTTTGATCAGGTGGCTAAGCTCAACTCAAG
CTATCCTGGTGGTTTGAAATCGTACATGAAAACTGGCTTAGTACTTTTAG
CAGACTCAAAGGCTGGGAAGAATCCTTGTGATGGCTTCACACTTTTTGTT
CCAACTGTAGAAATTGTGCAGTTCTGAGACGCTACCTTTATCAGTTCTGA
GCACGCCAGAGTTTAACAAGCAAAGAATGCTGCCCTATGTTCTGGATGAG
GCGGGGCTGGAGAACGTCCTAGATACCATGGATTGACGAGGCTTTTACGG
CGAAAACAGGTATGGAACATGTTGTTACAAACTACATCGCATGCATTTTG
GCTTTCCAGAGCCCACTTGAAACTTTCCGAGGAAAGGTCACAAAATCCTT
TTGTATATGAAATAA
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