EY727689

Overview
NameEY727689
Unique NameEY727689
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1121
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY727689 vs. ExPASy Swiss-Prot
Match: AB14C_ARATH (ABC transporter C family member 14 OS=Arabidopsis thaliana GN=ABCC14 PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 4.855e-45
Identity = 97/198 (48.99%), Postives = 125/198 (63.13%), Query Frame = 2
Query:   59 MSFNPSPFMGVYGSTAVLSMAILVERAYFGTLVGLKTAQIVFRQILPSILHAPMSFFDTTASRRILILASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQCAWPTFFLVIPLAWANYWYRGYYLSTSEELPRHDSITFGSCYSSFCEKHIWCCDKSCFWKADYIFSLKTLIKVTGNFAQGFPTTMGPNGGDGFRV 652
            +SF+ + F+ VY   A +S+ ++  RA++ T +GLKTAQI F+QIL S++HAPMSFFDTT S RIL  ASTDQTN+D+F+PF +G+   MY TLL IFI+TCQ AWPT F +IPL W N WYRGYYL++S EL R DSIT       F E          F K   +F  + + +V  N    F    G N   GFR+
Sbjct: 1011 VSFDATVFIRVYVIIAAVSIVLVCLRAFYVTHLGLKTAQIFFKQILNSLVHAPMSFFDTTPSGRILSRASTDQTNVDIFIPFMIGLVATMYTTLLSIFIVTCQYAWPTVFFIIPLGWLNIWYRGYYLASSRELTRLDSITKAPVIHHFSESIAGVMTIRAF-KKQPMFRQENVKRVNANLRMDFHNN-GSNEWLGFRL 1206          
BLAST of EY727689 vs. ExPASy Swiss-Prot
Match: AB4C_ARATH (ABC transporter C family member 4 OS=Arabidopsis thaliana GN=ABCC4 PE=1 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 1.082e-44
Identity = 100/199 (50.25%), Postives = 127/199 (63.82%), Query Frame = 2
Query:   56 SMSFNPSPFMGVYGSTAVLSMAILVERAYFGTLVGLKTAQIVFRQILPSILHAPMSFFDTTASRRILILASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQCAWPTFFLVIPLAWANYWYRGYYLSTSEELPRHDSITFGSCYSSFCEKHIWCCDKSCFWKADYIFSLKTLIKVTGNFAQGFPTTMGPNGGDGFRV 652
            ++SF+ S F+  Y   A++S+ ++  R+Y+ T +GLKTAQI FRQIL SILHAPMSFFDTT S RIL  ASTDQTN+D+ +PF +G+ V+MY TLL IFI+TCQ AWPT F VIPL W N WYR YYL++S EL R DSIT       F E          F K + +F  + + +V  N    F    G N   GFR+
Sbjct:  987 AISFDASVFILGYVIIALVSIVLVSIRSYYVTHLGLKTAQIFFRQILNSILHAPMSFFDTTPSGRILSRASTDQTNVDILIPFMLGLVVSMYTTLLSIFIVTCQYAWPTAFFVIPLGWLNIWYRNYYLASSRELTRMDSITKAPIIHHFSESIAGVMTIRSFRKQE-LFRQENVKRVNDNLRMDFHNN-GSNEWLGFRL 1183          
BLAST of EY727689 vs. ExPASy Swiss-Prot
Match: AB3C_ARATH (ABC transporter C family member 3 OS=Arabidopsis thaliana GN=ABCC3 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.938e-20
Identity = 51/130 (39.23%), Postives = 73/130 (56.15%), Query Frame = 2
Query:   74 SPFMGVYGSTAVLSMAILVERAYFGTLVGLKTAQIVFRQILPSILHAPMSFFDTTASRRILILASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQCAWPTFFLVIPLAWANYWYRGYYLSTSEELPR 463
            S  M VY + A  S   ++ RA      G KTA  +F ++   I  +PMSFFD+T S RI+  ASTDQ+ +DL LP+  G      I L+GI  +  Q +W  F + IP+  A+ WY+ YY++ + EL R
Sbjct:  988 STLMIVYVALAFGSSLCILLRATLLVTAGYKTATELFHKMHHCIFRSPMSFFDSTPSGRIMSRASTDQSAVDLELPYQFGSVAITVIQLIGIIGVMSQVSWLVFLVFIPVVAASIWYQRYYIAAARELSR 1117          

HSP 2 Score: 27.7202 bits (60), Expect = 7.938e-20
Identity = 11/26 (42.31%), Postives = 19/26 (73.08%), Query Frame = 3
Query:  483 AAVIRHFAKSISGVVTNRAFGKQTTF 560
            A +I+HF+++ISG  T R+F ++  F
Sbjct: 1124 APLIQHFSETISGATTIRSFSQEFRF 1149          
BLAST of EY727689 vs. ExPASy Swiss-Prot
Match: AB5C_ARATH (ABC transporter C family member 5 OS=Arabidopsis thaliana GN=ABCC5 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 5.059e-18
Identity = 53/136 (38.97%), Postives = 76/136 (55.88%), Query Frame = 2
Query:   68 NPSPFMGVYGSTAVLSMAILVERAYFGTLVGLKTAQIVFRQILPSILHAPMSFFDTTASRRILILASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQCAWPTFFLVIPLAWANYWYRGYYLSTSEELPRHDSI 475
            +P+  + VY + A  S   +  RA      GL  AQ +F  +L S+  APMSFFD+T + RIL   S DQ+ +DL +PF +G   +  I L GI  +     W  F LV+P+A A +W + YY+++S EL R  SI
Sbjct:  985 DPTLLLIVYTALAFGSSVFIFVRAALVATFGLAAAQKLFLNMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLCGIVAVMTNVTWQVFLLVVPVAVACFWMQKYYMASSRELVRIVSI 1120          
BLAST of EY727689 vs. ExPASy Swiss-Prot
Match: AB6C_ARATH (ABC transporter C family member 6 OS=Arabidopsis thaliana GN=ABCC6 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.559e-17
Identity = 54/140 (38.57%), Postives = 67/140 (47.86%), Query Frame = 2
Query:   89 VYGSTAVLSMAILVERAYFGTLVGLKTAQIVFRQILPSILHAPMSFFDTTASRRILILASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQCAWPTFFLVIPLAWANYWYRGYYLSTSEELPRHDSITFGSCYSSFCE 508
            VY   AV S   ++ RA    + G K A  +F Q+   I  A MSFFD T   RIL  ASTDQ+  DL LP          I +LGI  +  Q AW    + IP+  A  WYR YY+S + EL R   I+       F E
Sbjct:  943 VYVLLAVASSFCILIRALLVAMTGFKMATELFTQMHLRIFRASMSFFDATPMGRILNRASTDQSVADLRLPGQFAYVAIAAINILGIIGVIVQVAWQVLIVFIPVVAACAWYRQYYISAARELARLAGISRSPVVHHFSE 1082          

HSP 2 Score: 27.335 bits (59), Expect = 2.559e-17
Identity = 9/24 (37.50%), Postives = 18/24 (75.00%), Query Frame = 3
Query:  489 VIRHFAKSISGVVTNRAFGKQTTF 560
            V+ HF++++SG+ T R+F ++  F
Sbjct: 1076 VVHHFSETLSGITTIRSFDQEPRF 1099          
BLAST of EY727689 vs. ExPASy Swiss-Prot
Match: AB7C_ARATH (ABC transporter C family member 7 OS=Arabidopsis thaliana GN=ABCC7 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.325e-17
Identity = 52/140 (37.14%), Postives = 67/140 (47.86%), Query Frame = 2
Query:   89 VYGSTAVLSMAILVERAYFGTLVGLKTAQIVFRQILPSILHAPMSFFDTTASRRILILASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQCAWPTFFLVIPLAWANYWYRGYYLSTSEELPRHDSITFGSCYSSFCE 508
            VY   A  S   ++ RA    + G K A  +F Q+   I  A MSFFD T   RIL  ASTDQ+ +DL LP          + +LGI  +  Q AW    + IP+  A  WYR YY+S + EL R   I+       F E
Sbjct:  965 VYVFLATASSFCILVRAMLSAMTGFKIATELFNQMHFRIFRASMSFFDATPIGRILNRASTDQSAVDLRLPSQFSNLAIAAVNILGIIGVMGQVAWQVLIVFIPVIAACTWYRQYYISAARELARLSGISRSPLVQHFSE 1104          

HSP 2 Score: 26.5646 bits (57), Expect = 3.325e-17
Identity = 8/24 (33.33%), Postives = 19/24 (79.17%), Query Frame = 3
Query:  489 VIRHFAKSISGVVTNRAFGKQTTF 560
            +++HF++++SG+ T R+F ++  F
Sbjct: 1098 LVQHFSETLSGITTIRSFDQEPRF 1121          
BLAST of EY727689 vs. ExPASy Swiss-Prot
Match: AB13C_ARATH (ABC transporter C family member 13 OS=Arabidopsis thaliana GN=ABCC13 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 4.900e-13
Identity = 47/148 (31.76%), Postives = 77/148 (52.03%), Query Frame = 2
Query:   65 FNPSPFMGVYGSTAVLSMAILVERAYFGTLVGLKTAQIVFRQILPSILHAPMSFFDTTASRRILILASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQCAWPTFFLVIPLAWANYWYRGYYLSTSEELPRHDSITFGSCYSSFCE 508
            ++ S ++ V     +++  + + RA+     GLK A  V   ++  +++AP  FFD T S RIL   S+D   ID  LPF + I +A ++ LLGI ++          L++P  +     + +Y STS EL R DS++    Y+SF E
Sbjct:  671 YSTSFYLMVLCIFCIINSILTLVRAFSFAFGGLKAAVHVHNALISKLINAPTQFFDQTPSGRILNRFSSDLYTIDDSLPFILNILLANFVGLLGIIVVLSYVQVLFLLLLLPFWYIYSKLQVFYRSTSRELRRLDSVSRSPIYASFTE 818          
BLAST of EY727689 vs. ExPASy Swiss-Prot
Match: AB9C_ARATH (ABC transporter C family member 9 OS=Arabidopsis thaliana GN=ABCC9 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 6.943e-13
Identity = 45/140 (32.14%), Postives = 63/140 (45.00%), Query Frame = 2
Query:   89 VYGSTAVLSMAILVERAYFGTLVGLKTAQIVFRQILPSILHAPMSFFDTTASRRILILASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQCAWPTFFLVIPLAWANYWYRGYYLSTSEELPRHDSITFGSCYSSFCE 508
            VY   A  S   ++ R     + GL TA+  F ++L SI  APMSFFD+T + RIL  ASTDQ+ +DL +   +G      I ++G   +  Q AW                + YY  T+ EL R   +        F E
Sbjct:  979 VYALLAAGSSLCVLARTILVAIGGLSTAETFFSRMLCSIFRAPMSFFDSTPTGRILNRASTDQSVLDLEMAVKLGWCAFSIIQIVGTIFVMSQVAW----------------QRYYTPTARELSRMSGVERAPILHHFAE 1102          

HSP 2 Score: 29.6462 bits (65), Expect = 6.943e-13
Identity = 11/28 (39.29%), Postives = 20/28 (71.43%), Query Frame = 3
Query:  483 AAVIRHFAKSISGVVTNRAFGKQTTFLA 566
            A ++ HFA+S++G  T RAF ++  F++
Sbjct: 1094 APILHHFAESLAGATTIRAFDQRDRFIS 1121          
BLAST of EY727689 vs. ExPASy Swiss-Prot
Match: MRP2_HUMAN (Canalicular multispecific organic anion transporter 1 OS=Homo sapiens GN=ABCC2 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.862e-12
Identity = 50/144 (34.72%), Postives = 80/144 (55.56%), Query Frame = 2
Query:   83 MGVYGSTAVLSMAILVERAYFGTLVG-LKTAQIVFRQILPSILHAPMSFFDTTASRRILILASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQCAWPTF-FLVIPLAWANYWYRGYYLSTSEELPRHDSITFGSCYSSFCE 508
            +GVYG+   L+  I V  A+F +  G +  + I+ +Q+L +IL APM FFDTT + RI+   + D + +D  LP  +   +  ++ ++   ++ C  A P F  +VIPL       + +Y+STS +L R DS+T    YS F E
Sbjct: 1024 VGVYGALG-LAQGIFVFIAHFWSAFGFVHASNILHKQLLNNILRAPMRFFDTTPTGRIVNRFAGDISTVDDTLPQSLRSWITCFLGIISTLVMICM-ATPVFTIIVIPLGIIYVSVQMFYVSTSRQLRRLDSVTRSPIYSHFSE 1165          
BLAST of EY727689 vs. ExPASy Swiss-Prot
Match: YH85_SCHPO (Uncharacterized ABC transporter ATP-binding protein/permease C359.05 OS=Schizosaccharomyces pombe GN=SPBC359.05 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.432e-12
Identity = 49/150 (32.67%), Postives = 76/150 (50.67%), Query Frame = 2
Query:   56 SMSFNPSPF--MGVYGSTAVLSMAILVERAYFGT-LVGLKTAQIVFRQILPSILHAPMSFFDTTASRRILILASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQCAWPTFFLVIPLAWANYWYRGYYLSTSEELPRHDSITFGSCYS 496
            S   NPSP+  +G+Y     LS A +   +   T L G+++ + +   +L +IL APM FF+TT+S RIL   S D   +D  +           I +L I  + C  A  +  L++PL +   + R YY+ TS EL R D++T    Y+
Sbjct:  935 SSELNPSPYFYLGIYLFFGFLSCAFISSSSLTMTVLCGIRSGRYLHDSMLKTILRAPMGFFETTSSGRILNRFSNDVYKVDEVVSLTFMFFFRNSIQVLFILGVICYSAPLSLLLIVPLFFLYLYNRAYYVRTSRELKRLDNVTRSPLYA 1084          
The following BLAST results are available for this feature:
BLAST of EY727689 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
AB14C_ARATH4.855e-4548.99ABC transporter C family member 14 OS=Arabidopsis ... [more]
AB4C_ARATH1.082e-4450.25ABC transporter C family member 4 OS=Arabidopsis t... [more]
AB3C_ARATH7.938e-2039.23ABC transporter C family member 3 OS=Arabidopsis t... [more]
AB5C_ARATH5.059e-1838.97ABC transporter C family member 5 OS=Arabidopsis t... [more]
AB6C_ARATH2.559e-1738.57ABC transporter C family member 6 OS=Arabidopsis t... [more]
AB7C_ARATH3.325e-1737.14ABC transporter C family member 7 OS=Arabidopsis t... [more]
AB13C_ARATH4.900e-1331.76ABC transporter C family member 13 OS=Arabidopsis ... [more]
AB9C_ARATH6.943e-1332.14ABC transporter C family member 9 OS=Arabidopsis t... [more]
MRP2_HUMAN1.862e-1234.72Canalicular multispecific organic anion transporte... [more]
YH85_SCHPO2.432e-1232.67Uncharacterized ABC transporter ATP-binding protei... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-104-D04-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727689 ID=EY727689; Name=EY727689; organism=Citrus sinensis; type=EST; length=1121bp
GGGAAATCGGGGACCGCGGTACGGTTCGGGATTCCCGGGTCGACCCCGCG
TCCGCTCTATGTCATTTAATCCTTCCCCCTTTATGGGTGTCTATGGAAGT
ACTGCAGTCCTGTCCATGGCCATACTGGTGGAGAGAGCCTATTTTGGTAC
TCTTGTGGGACTTAAGACAGCCCAGATTGTTTTCCGCCAAATTCTTCCAA
GTATCTTGCATGCCCCCATGTCCTTTTTTGACACCACGGCTTCTCGAAGA
ATTTTAATTCTGGCGTCGACTGATCAAACCAACATTGATCTCTTTCTCCC
ATTCTTCGTTGGCATTACTGTTGCCATGTACATCACGCTGCTTGGCATCT
TCATTATAACATGTCAGTGTGCTTGGCCCACATTTTTCTTAGTAATACCG
CTTGCTTGGGCAAATTACTGGTACCGGGGATACTATCTTTCTACATCAGA
AGAATTACCCCGCCATGACTCAATCACCTTCGGCAGCTGTTATTCGTCAT
TTTGCGAAAAGCATATCTGGTGTTGTGACAAATCGTGCTTTTGGAAAGCA
GACTACATTTTTAGCCTGAAAACGTTGATAAAGGTAACGGGCAATTTTGC
ACAGGGTTTTCCCACAACAATGGGCCCCAATGGAGGGGATGGGTTCCGGG
TCTGGACCTTACTTGGCAAATTTTGTTTCCGCCTCCCCCCCTTTGGTTAA
GGAACACCGTTAACCCCCCCTTAGTCAAAAACCCCAAAAAAAGGGTGGGT
TGGGCCCCTTCCCTTTTGGGGTGGCCCCCCCAAGAGAGGTGTTTTTCTAG
GGGCCTTAAAACATGGGATTTGTGCTGTGGGGAAAACCCGGGGTTGGTTT
CTTTGTTTTGAATAGGTAAAATGGGGGTTTTACCAAAAATTTCCCTTCAA
GAACCCCGCGCTGGGGAATAAAGGGGCAAAACTCGCCTTTTCCCCCCCTC
AACAAATGTGGGACGGAGTGTCTAGGGGCAAAGGGGGAAAAAAAAACCAA
TAGAAACAATTGCAGGAAGGTGAAAAATATTTTTCCTCTCCCACTCACGA
TCCCCTTCGCGGGGGGGTGTGTTTGTGGAGAAGATGTAATATTTTTAACT
CCCCCTCCCCCTCCCCCTTTC
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