EY753966

Overview
NameEY753966
Unique NameEY753966
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753966 vs. ExPASy Swiss-Prot
Match: ERI2_HUMAN (ERI1 exoribonuclease 2 OS=Homo sapiens GN=ERI2 PE=2 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 1.088e-30
Identity = 75/192 (39.06%), Postives = 111/192 (57.81%), Query Frame = 2
Query:   26 KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNFAV---------------VTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGXKXCITNFL 553
            K+ + QEIIEFP+V++++ TGQ+++ FQ YV+P  + +LS+FC +LTGI+Q QVD GV L   L +  KW+   +  KN  FA                VTWS+WD  V LE EC+ K++ KP + N WI+L+  +   +      L  A++  G+ + GR H GLDD++NTA L   ++  G    IT  L
Sbjct:   51 KHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSEFCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPSASEVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCVMKITRSL 242          
BLAST of EY753966 vs. ExPASy Swiss-Prot
Match: ERI2_MOUSE (ERI1 exoribonuclease 2 OS=Mus musculus GN=Eri2 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.214e-30
Identity = 72/186 (38.71%), Postives = 107/186 (57.53%), Query Frame = 2
Query:   44 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAV---------------VTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGXKXCITNFL 553
            EIIEFP+V++++ TG++E+ F  YV+P  + +LS+FC +LTGI+Q+QVD GV L   L +  KW+     + T +FA                VTWS+WD  V LE ECR K++ KP + N WI+L+  +   +      L  A++  G+ + GR H GLDD++NTA L   ++  G    IT  L
Sbjct:   57 EIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSEFCTELTGIKQVQVDEGVPLKICLSQFCKWIHKLQQQQTISFAAGDSEPSTSEVKLCAFVTWSDWDLGVCLEYECRRKQLLKPVFLNSWIDLRATYRLFYKRKPKGLSGALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCLMKITRSL 242          
BLAST of EY753966 vs. ExPASy Swiss-Prot
Match: ERI2_XENLA (ERI1 exoribonuclease 2 OS=Xenopus laevis GN=eri2 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.681e-29
Identity = 78/206 (37.86%), Postives = 115/206 (55.83%), Query Frame = 2
Query:   41 QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN----KGI------------KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGXKXCITNFLMWQTHDGSLTWNQXPERIL 610
            QEIIEFP+V+++   G++E+ F TYV+P  + +LSDFC +LTGI Q QVD GV L   L + + W++     KGI            ++   A VTWS+WD  V L  ECR K++ KP   N WI+L+  +   +      L  A++  G+ + GR H GLDD++NTA+L + ++  G    IT  L    H  S T    P+++L
Sbjct:   56 QEIIEFPAVLLNVSNGEIESEFHTYVQPQEHPILSDFCTELTGINQQQVDDGVPLKICLSQFNSWIQKLQKEKGIAFVTAVPTHSTAEHKMCAFVTWSDWDLGVCLLYECRRKQMKKPDILNSWIDLRATYKLFYNRRPKGLNGALQDLGIEFSGREHSGLDDSRNTAKLASRMICDGCVMKITKSLDKVNHKISYT---RPQQVL 258          
BLAST of EY753966 vs. ExPASy Swiss-Prot
Match: ERI1_HUMAN (3'-5' exoribonuclease 1 OS=Homo sapiens GN=ERI1 PE=1 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 4.732e-26
Identity = 65/185 (35.14%), Postives = 101/185 (54.59%), Query Frame = 2
Query:   35 YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLLALLMHRGXKXCITNFLMWQTHDGSL 580
            +  EIIEFP V++++ T ++E  FQ YVRP  N  LSDFC  LTGI Q QVDR  T  + L +   W++ K +     ++++T  +WD    L  +C+  ++  PP+  +WIN++  +   +   R   K  +  E  G+ + GR HCGLDD+KN AR+   ++  G +  I      + H G L
Sbjct:  147 FVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIARIAVRMLQDGCELRINE----KMHAGQL 327          
BLAST of EY753966 vs. ExPASy Swiss-Prot
Match: ERI1_MOUSE (3'-5' exoribonuclease 1 OS=Mus musculus GN=Eri1 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 4.429e-24
Identity = 59/174 (33.91%), Postives = 96/174 (55.17%), Query Frame = 2
Query:   44 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLLALLMHRGXKXCITNFLM 556
            EIIEFP V++++ T ++E  FQ YVRP  N  LS+FC  LTGI Q QVDR     + L +  +W+++K +     + ++T  +WD    L  +CR  ++  P +  +WIN++  +   +   R   K  +  E  G+ + GR H GLDD+KN AR+   ++  G +  I   ++
Sbjct:  146 EIIEFPVVLLNTHTLEIEDTFQQYVRPEVNAQLSEFCIGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLSIQCRLSRLKHPAFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIAVRMLQDGCELRINEKIL 319          
BLAST of EY753966 vs. ExPASy Swiss-Prot
Match: ERI3_HUMAN (ERI1 exoribonuclease 3 OS=Homo sapiens GN=ERI3 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 5.784e-24
Identity = 61/167 (36.53%), Postives = 93/167 (55.69%), Query Frame = 2
Query:   35 YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRG 526
            +PQEIIEFP + ++  T ++E+ F  YV+P  +  L+ FC +LTGI Q  VD   +L + L R D+W+  +G+   N     VT  +WD +VML  +C++  +    YF +WINLK  +    G   +  L +  +   L   GR H G+DD KN A ++  L +RG
Sbjct:  161 HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRG 327          
BLAST of EY753966 vs. ExPASy Swiss-Prot
Match: ERI3_BOVIN (ERI1 exoribonuclease 3 OS=Bos taurus GN=ERI3 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.784e-24
Identity = 61/167 (36.53%), Postives = 93/167 (55.69%), Query Frame = 2
Query:   35 YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRG 526
            +PQEIIEFP + ++  T ++E+ F  YV+P  +  L+ FC +LTGI Q  VD   +L + L R D+W+  +G+   N     VT  +WD +VML  +C++  +    YF +WINLK  +    G   +  L +  +   L   GR H G+DD KN A ++  L +RG
Sbjct:  161 HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRG 327          
BLAST of EY753966 vs. ExPASy Swiss-Prot
Match: ERI3_MOUSE (ERI1 exoribonuclease 3 OS=Mus musculus GN=Eri3 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.555e-24
Identity = 61/167 (36.53%), Postives = 92/167 (55.09%), Query Frame = 2
Query:   35 YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRG 526
            +PQEIIEFP + ++  T ++E+ F  YV+P  +  L+ FC +LTGI Q  VD   +L + L R D+W+  +G+   N     VT  +WD +VML  +C +  +    YF +WINLK  +    G   +  L +  +   L   GR H G+DD KN A ++  L +RG
Sbjct:  161 HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCHYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRG 327          
BLAST of EY753966 vs. ExPASy Swiss-Prot
Match: ERI2_DANRE (ERI1 exoribonuclease 2 OS=Danio rerio GN=eri2 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.867e-24
Identity = 69/189 (36.51%), Postives = 99/189 (52.38%), Query Frame = 2
Query:   26 KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL----ENKGI-----------KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGXKXCITN 547
            K+   QEIIEFP+V++S  +G +E+ F +YV+P    +LS FC +LTGI Q QVD    L   L R  +WL    E +G+                A VTWS+WD  V L  EC+ K++  P     WI+L+  +   +      L+ A+   G+ + GR H GL DA+NTA L   +M  G +  IT+
Sbjct:   48 KSSSGQEIIEFPAVLLSVCSGAVESEFHSYVQPQERPVLSAFCTELTGITQDQVDSAPPLHVVLSRFSRWLRSLQEERGVVFLTDSSGAAPSAQLCAFVTWSDWDLGVCLLYECKRKQLSVPEALKNWIDLRATYKLFYNRKPKGLRGALLDLGIEFTGREHSGLVDARNTALLAQRMMTDGCQLSITS 236          
BLAST of EY753966 vs. ExPASy Swiss-Prot
Match: ERI1_RAT (3'-5' exoribonuclease 1 OS=Rattus norvegicus GN=Eri1 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.198e-23
Identity = 61/182 (33.52%), Postives = 98/182 (53.85%), Query Frame = 2
Query:   44 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLLALLMHRGXKXCITNFLMWQTHDGSL 580
            EIIEFP V++++ + ++E  FQ YVRP  N  LS+FC  LTGI Q QVDR     + L +  +W+++K +     + ++T  +WD    L  +C+  ++  P +  +WIN++  +   +   R   K  +  E  G+ + GR H GLDD+KN AR+   ++  G +  I   L    H G L
Sbjct:  146 EIIEFPVVLLNTHSLEIEDTFQQYVRPEVNSQLSEFCIGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLNIQCQLSRLKYPSFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIAVRMLQDGCELRINEKL----HGGQL 323          
The following BLAST results are available for this feature:
BLAST of EY753966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
ERI2_HUMAN1.088e-3039.06ERI1 exoribonuclease 2 OS=Homo sapiens GN=ERI2 PE=... [more]
ERI2_MOUSE9.214e-3038.71ERI1 exoribonuclease 2 OS=Mus musculus GN=Eri2 PE=... [more]
ERI2_XENLA2.681e-2937.86ERI1 exoribonuclease 2 OS=Xenopus laevis GN=eri2 P... [more]
ERI1_HUMAN4.732e-2635.143'-5' exoribonuclease 1 OS=Homo sapiens GN=ERI1 PE... [more]
ERI1_MOUSE4.429e-2433.913'-5' exoribonuclease 1 OS=Mus musculus GN=Eri1 PE... [more]
ERI3_HUMAN5.784e-2436.53ERI1 exoribonuclease 3 OS=Homo sapiens GN=ERI3 PE=... [more]
ERI3_BOVIN5.784e-2436.53ERI1 exoribonuclease 3 OS=Bos taurus GN=ERI3 PE=2 ... [more]
ERI3_MOUSE7.555e-2436.53ERI1 exoribonuclease 3 OS=Mus musculus GN=Eri3 PE=... [more]
ERI2_DANRE9.867e-2436.51ERI1 exoribonuclease 2 OS=Danio rerio GN=eri2 PE=2... [more]
ERI1_RAT2.198e-2333.523'-5' exoribonuclease 1 OS=Rattus norvegicus GN=Er... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-009-A03-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753966 ID=EY753966; Name=EY753966; organism=Citrus sinensis; type=EST; length=890bp
ATNNGAGGNTANTGGAGACACGNACAAGAATCCTTATCCCCAGGAGATAA
TCGAGTTTCCATCTGTCATTGTGAGTAGTGTAACTGGTCAACTGGAAGCA
TGTTTTCAGACATATGTGCGGCCGACTTGCAATCAACTACTGAGTGATTT
TTGCAAGGATCTGACAGGTATCCAGCAAATTCAGGTGGACAGAGGTGTTA
CTCTAAGCGAGGCTTTACTTAGGCATGACAAATGGCTTGAGAATAAGGGC
ATAAAAAACACCAACTTTGCTGTCGTGACATGGTCAAATTGGGATTGTCG
GGTAATGTTGGAATCTGAATGCCGATTCAAAAAGATTTGGAAACCTCCTT
ATTTTAACAGATGGATCAACTTAAAAGTTCCATTTCATGAGGTTTTTGGT
GGAGTGAGGTGCAATTTAAAAGAAGCTGTTGAGATGGCAGGCCTGGCATG
GCAAGGCCGTGCACACTGTGGCCTAGATGATGCGAAAAATACTGCTCGCC
TACTTGCACTCCTCATGCACAGAGGGNCCAAATNCTGCATTACAAACTTT
TTGATGTGGCAGACACATGATGGTTCTTTGACATGGAATCAGNTTCCTGA
ACGCATATTGCTTNCACCAAATTGGGTGGCCAAACAAAAGGAGCTTGGCA
AATTCCTTTTTCCAGTATCATCCTAAGTGGTTTGTGGGGGGTGAAAAGCA
GCAAAGGGATGGGTTCGAAGCCTGGGACCAAAACAGGGGAATGTTTTTTT
TGGGGGGCGGAAATTGGATTGGTACTTTAAGTGGCCCGTGGGAATTTGTT
GGTTGGCGCCTTTACTACGGCCTTTCTGGAAAGTATGGATGGGATCTCCA
TTCTTTCTGGTTGACATGTCAAACCTTTAAAAAAAATATA
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