EY753955

Overview
NameEY753955
Unique NameEY753955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY753955 vs. ExPASy Swiss-Prot
Match: UBQL_DICDI (Ubiquilin OS=Dictyostelium discoideum GN=ubqln PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.999e-14
Identity = 36/69 (52.17%), Postives = 46/69 (66.67%), Query Frame = 1 
Query:  250 NIRCSNGTKFSVDIDLESSVETFKAALAEKCEVPPQQQRLIYKGRILKDDQTLKSYGLEADHTVHLVRG 456
            NI+ S   KF VD++L  +V  FK  +A KC +P  QQR+IY GRILKD QTL    ++  HTVHLV+G
Sbjct:    5 NIKSSTDNKFDVDVELGITVADFKKVIATKCSIPADQQRIIYSGRILKDHQTLDEIKIQDGHTVHLVKG 73
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BLAST of EY753955 vs. ExPASy Swiss-Prot
Match: DSK2_SCHPO (Deubiquitination-protection protein dph1 OS=Schizosaccharomyces pombe GN=dph1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.131e-11
Identity = 29/67 (43.28%), Postives = 49/67 (73.13%), Query Frame = 1 
Query:  253 IRCSNGTKFSVDIDLESSVETFKAALAEKCEVPPQQQRLIYKGRILKDDQTLKSYGLEADHTVHLVR 453
            I+ +N  K++V +D ESSV   K A+A   ++  ++QRLIY GR+LKD+++LK+Y ++  H++HLV+
Sbjct:    8 IKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYKIQDGHSIHLVK 74
The following BLAST results are available for this feature:
BLAST of EY753955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
UBQL_DICDI8.999e-1452.17Ubiquilin OS=Dictyostelium discoideum GN=ubqln PE=... [more]
DSK2_SCHPO7.131e-1143.28Deubiquitination-protection protein dph1 OS=Schizo... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-008-H02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753955 ID=EY753955; Name=EY753955; organism=Citrus sinensis; type=EST; length=873bp
CCACGCGTCCGAAATTTCGTTTTTTTTTTTTCCTCTCTTTCTATGATCCG
ATTTCGATTTATTAATATATACTAATATAGAAATAAATAAATAAATATTT
TTTAAAGGGTTAGGGTTTCGTAAATTTGATCGATCGGCTTGCTTTTTGTT
TTATTTATTTTCAAAGTTATTGGATTCGTTGGGCCTCCGGCAGGGATGGG
GGCTGGAGATGAGGTAAGCGAATCGAGCGGAGGAGAGGGAGTAAAGGTGA
ATATCCGATGCTCGAACGGCACAAAATTTTCGGTGGATATCGATCTGGAA
TCCAGCGTTGAAACATTCAAAGCGGCGTTGGCGGAAAAGTGCGAGGTTCC
GCCTCAGCAACAGCGGTTGATTTATAAAGGTCGGATCTTGAAGGACGATC
AAACCCTCAAAAGCTATGGTTTGGAGGCAGATCACACTGTGCACTTGGTT
CGTGGTTTTGCACCTGCTGCATCTACAAACAATGCTGCGCCAACCAACTC
TGGAGGTTCAACTACTACTCCAAACAGCACAAGGCCCGTGAGTACTAATG
AAGGTGATGCTCTTGGAGGAGCTGGTCTTGGAGCTTCTCTGTTTCCTGGA
CTTGCATCAATGGTTTAAGTGGCACCGGAGGTGGGTTGTTTGGAACTGGA
CTTCANAATTTGAACAGTGCAGCAACACTGACCCGGGACCCCACCTTATG
AAAGAGATCATGAATTGCCTGCCGGCAGAATCTTAGAATACCCTGAAATA
TGCAAACTTGATAAGACCATCCTAAATGCCTGAAATATTGACCGAAACCT
GGCCTACCCACTACTAAAGACCTTACACTTTGCGTAAACACTTGAACTGC
AGAAAACCAAACCTATGCGGGAA
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