EY753926

Overview
NameEY753926
Unique NameEY753926
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753926 vs. ExPASy Swiss-Prot
Match: CLH1_CITUN (Chlorophyllase-1, chloroplastic OS=Citrus unshiu PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 2.126e-62
Identity = 119/232 (51.29%), Postives = 143/232 (61.64%), Query Frame = 3
Query:    6 MTAVADSKPV-SVEAKPGLATALLSVFSSGPYSPKLKTVNKPWFNSFPP-KPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFL-PPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSHDSFEFSIPXXXXXXXXXXXXKCMQPCAPXNKTMSHF 692
            M A+ DSKP  SV+  P LATA L VF+ G YS K  T+     +S PP KPL IV P EKGT+ VILF HGT+LSN SYS + DH+ASHG+IVVAPQLY  + PP    E+N AA V  WL  GLQ  LPEN EAN++ VA+MGHSRGG  AF L+L Y           A++G+DPVAG  S  + L+P ILS DSF+FSIP            +C+  CAP       F
Sbjct:    1 MAAMVDSKPAASVQGTPLLATATLPVFTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAEKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--------FGAVIGLDPVAG-TSKTTGLDPSILSFDSFDFSIPVTVIGTGLGGVARCITACAPEGANHEEF 223          

HSP 2 Score: 54.299 bits (129), Expect = 2.126e-62
Identity = 23/32 (71.88%), Postives = 24/32 (75.00%), Query Frame = 2
Query:  677 NHEPFFKRCTYSDHAHFDAKDYGHMDILNDNP 772
            NHE FF RC  S  AHF A DYGHMDIL+DNP
Sbjct:  219 NHEEFFNRCKNSSRAHFVATDYGHMDILDDNP 250          
BLAST of EY753926 vs. ExPASy Swiss-Prot
Match: CLH1_CITSI (Chlorophyllase-1, chloroplastic OS=Citrus sinensis GN=CHLASE1 PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 3.020e-61
Identity = 117/232 (50.43%), Postives = 142/232 (61.21%), Query Frame = 3
Query:    6 MTAVADSKPV-SVEAKPGLATALLSVFSSGPYSPKLKTVNKPWFNSFPP-KPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFL-PPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSHDSFEFSIPXXXXXXXXXXXXKCMQPCAPXNKTMSHF 692
            M A+ D+KP  SV+  P LATA L VF+ G YS K  T+     +S PP KPL IV P  KGT+ VILF HGT+LSN SYS + DH+ASHG+IVVAPQLY  + PP    E+N AA V  WL  GLQ  LPEN EAN++ VA+MGHSRGG  AF L+L Y           A++G+DPVAG  S  + L+P ILS DSF+FSIP            +C+  CAP       F
Sbjct:    1 MAAMVDAKPAASVQGTPLLATATLPVFTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--------FGAVIGLDPVAG-TSKTTGLDPSILSFDSFDFSIPVTVIGTGLGGVARCITACAPEGANHEEF 223          

HSP 2 Score: 54.299 bits (129), Expect = 3.020e-61
Identity = 23/32 (71.88%), Postives = 24/32 (75.00%), Query Frame = 2
Query:  677 NHEPFFKRCTYSDHAHFDAKDYGHMDILNDNP 772
            NHE FF RC  S  AHF A DYGHMDIL+DNP
Sbjct:  219 NHEEFFNRCKNSSRAHFVATDYGHMDILDDNP 250          
BLAST of EY753926 vs. ExPASy Swiss-Prot
Match: CLH1_ARATH (Chlorophyllase-1 OS=Arabidopsis thaliana GN=CLH1 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.269e-46
Identity = 90/186 (48.39%), Postives = 115/186 (61.83%), Query Frame = 3
Query:  144 PPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSH--DSFEFSIP-XXXXXXXXXXXXKCMQPCAPXNKTMSHF 692
            PPKP+ I  P   GTY V+LFFHG  L N  YS++L+H+ASHGYI+VAPQL   LPP G  EV+DA +V+NW S  L++ LP +V AN  Y +L+GHSRGG  AF +ALG+A     SI  SAL+GIDPVAG  + +   +P IL++  +SFE  IP               M PCAP +     F
Sbjct:   41 PPKPVRITCPTVAGTYPVVLFFHGFYLRNYFYSDVLNHIASHGYILVAPQLCKLLPPGGQVEVDDAGSVINWASENLKAHLPTSVNANGKYTSLVGHSRGGKTAFAVALGHAATLDPSITFSALIGIDPVAG-TNKYIRTDPHILTYKPESFELDIPVAVVGTGLGPKWNNVMPPCAPTDLNHEEF 225          

HSP 2 Score: 42.3578 bits (98), Expect = 1.269e-46
Identity = 19/34 (55.88%), Postives = 24/34 (70.59%), Query Frame = 2
Query:  677 NHEPFFKRCTYSDHAHFDAKDYGHMDILNDNPQG 778
            NHE F+K C  +  AHF A DYGHMD+L+D+  G
Sbjct:  221 NHEEFYKECK-ATKAHFVAADYGHMDMLDDDLPG 253          
BLAST of EY753926 vs. ExPASy Swiss-Prot
Match: CLH2_ARATH (Chlorophyllase-2, chloroplastic OS=Arabidopsis thaliana GN=CLH2 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.787e-35
Identity = 76/193 (39.38%), Postives = 103/193 (53.37%), Query Frame = 3
Query:  144 PPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLAL---GYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSH--DSFEFS---IPXXXXXXXXXXXXKCMQPCAPXNKTMSHFSR 698
            PPK L +  P E+G Y V++  HG  L N+ YS L+ H++SHG+I++APQLY    P    E+   A +++WLS GL   LP  V  NL+  AL GHSRGG  AF +AL   GY++N    +KIS L+GIDPV G      +  PP+L++  +SF+     I                 PCAP       F R
Sbjct:   41 PPKQLLVATPVEEGDYPVVMLLHGYLLYNSFYSQLMLHVSSHGFILIAPQLYSIAGPDTMDEIKSTAEIMDWLSVGLNHFLPAQVTPNLSKFALSGHSRGGKTAFAVALKKFGYSSN----LKISTLIGIDPVDGTGK-GKQTPPPVLAYLPNSFDLDKTPILVIGSGLGETARNPLFPPCAPPGVNHREFFR 228          

HSP 2 Score: 41.5874 bits (96), Expect = 1.787e-35
Identity = 21/52 (40.38%), Postives = 28/52 (53.85%), Query Frame = 2
Query:  677 NHEPFFKRCTYSDHAHFDAKDYGHMDILNDNPQGPRIGQFKILCTMERTKDP 832
            NH  FF+ C      HF AKDYGH+D+L+D+ +G R      LC     + P
Sbjct:  222 NHREFFRECQ-GPAWHFVAKDYGHLDMLDDDTKGIRGKSSYCLCKNGEERRP 272          
BLAST of EY753926 vs. ExPASy Swiss-Prot
Match: CLH0_CHEAL (Chlorophyllase type 0 OS=Chenopodium album GN=CACLH PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.926e-34
Identity = 79/188 (42.02%), Postives = 110/188 (58.51%), Query Frame = 3
Query:   69 LLSVFSSGPYSPKLKTVNKPWFNSFPPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPK---GNGEVNDAANVLNWLSTGLQSELPE---NVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSH--DSFEFSIP 608
            +  VF  G +      +    +    P+PL I+ P+E G Y V+LF HGT LSN  YS   +++ASHG+IVVAP+L+   PPK      E++ AA+V NW+   LQ  L      VE +L  +A+ GHSRGG  AF LALG+ +N  + +  SAL+G+DPVAG  SV     P +L++  +SF  SIP
Sbjct:   34 ITDVFHKGNFQVTNNPIRVKRYEFSAPEPLIIISPKEAGVYPVLLFIHGTMLSNEDYSLFFNYIASHGFIVVAPKLFRLFPPKLPSQQDEIDMAASVANWMPLYLQVVLQRYVTGVEGDLEKLAISGHSRGGKSAFALALGF-SNIKLDVTFSALIGVDPVAG-RSVDDRTLPHVLTYKPNSFNLSIP 219          

HSP 2 Score: 33.4982 bits (75), Expect = 1.926e-34
Identity = 20/67 (29.85%), Postives = 29/67 (43.28%), Query Frame = 2
Query:  650 HAALCTXKQ-NHEPFFKRCTYSDHAHFDAKDYGHMDILNDNPQGPRIGQFKILC--------TMERT 823
            H   C     +H+ F+  C   + +HF    YGHMD+LN+    P      ++C        TM RT
Sbjct:  230 HTISCAPNHVSHQQFYDECK-ENSSHFVITKYGHMDMLNEFRLSPIAVTMSLMCAQSFRPKATMRRT 295          
The following BLAST results are available for this feature:
BLAST of EY753926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CLH1_CITUN2.126e-6251.29Chlorophyllase-1, chloroplastic OS=Citrus unshiu P... [more]
CLH1_CITSI3.020e-6150.43Chlorophyllase-1, chloroplastic OS=Citrus sinensis... [more]
CLH1_ARATH1.269e-4648.39Chlorophyllase-1 OS=Arabidopsis thaliana GN=CLH1 P... [more]
CLH2_ARATH1.787e-3539.38Chlorophyllase-2, chloroplastic OS=Arabidopsis tha... [more]
CLH0_CHEAL1.926e-3442.02Chlorophyllase type 0 OS=Chenopodium album GN=CACL... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-008-E07-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753926 ID=EY753926; Name=EY753926; organism=Citrus sinensis; type=EST; length=871bp
CTACAATGACTGCAGTAGCCGATAGCAAGCCCGTCTCCGTTGAAGCTAAG
CCTGGTTTGGCAACGGCCTTACTATCAGTTTTTTCAAGTGGACCTTATTC
CCCGAAACTCAAGACAGTGAATAAACCATGGTTTAATAGTTTTCCTCCAA
AGCCGTTGAATATTGTTTATCCAGAAGAAAAAGGAACATATGAAGTTATT
TTGTTTTTCCACGGCACTGCTCTCAGCAACACAAGCTATTCCAATCTCTT
AGACCACTTGGCTTCCCATGGATACATCGTTGTTGCCCCTCAGTTATACG
ATTTTCTGCCGCCGAAAGGAAACGGAGAAGTTAACGATGCAGCAAACGTC
CTCAACTGGTTATCAACAGGCCTTCAATCAGAACTCCCGGAAAATGTTGA
AGCTAACCTAAACTACGTTGCTCTTATGGGACACAGTCGCGGAGGACTAA
TAGCGTTCGGTCTGGCACTTGGCTATGCAACAAATCCTCCAGTTAGCATT
AAAATTTCAGCATTAGTAGGCATAGACCCAGTTGCGGGGTTAGCCAGCGT
TCATAGTGAACTTGAACCCCCGATTCTCAGTCATGACTCATTCGAGTTCT
CAATTCCTGTTACTGGTATTGGCACCGGNACTCGTGGTGTGACAAAGTGC
ATGCAGCCTTGTGCACCGNAAAACAAAACCATGAGCCATTTTTCAAGAGG
TGTACATATTCAGATCATGCTCATTTTGATGCTAAGGATTATGGGCACAT
GGACATTTTAAATGATAATCCCCAGGGACCAAGAATTGGGCAATTCAAAA
TTTTGTGCACGATGGAAAGAACCAAGGATCCCTGAGGAGATTGGTGCTGG
CATGCTGCCGCTTTTTGAAGC
back to top