EY753862

Overview
NameEY753862
Unique NameEY753862
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY753862_ssr88 microsatellite EY753862_ssr88:88..99. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig6299 contig Csv1_Contig6299:108..994. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753862 vs. ExPASy Swiss-Prot
Match: IDI1_CAMAC (Isopentenyl-diphosphate Delta-isomerase I OS=Camptotheca acuminata GN=IPI1 PE=2 SV=1)

HSP 1 Score: 419.468 bits (1077), Expect = 1.290e-116
Identity = 201/232 (86.64%), Postives = 215/232 (92.67%), Query Frame = 1
Query:  121 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNRGQLKELLRKADAGEESLKLSPWFKLVVDNFLXKGWDHLEKGTLNEVIDIETFH 816
            MGDA TDAGMDAVQ+RLMFED+CILVDEND VVGH+ KYNCHLMEKIES NLLHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+ENALG RNAAQRKLLDELGI AEDVPVD+F PLGRILYKAPSDGKWGEHELDYLLFIVRDV+VNPNPDEVA+ KYV R QLKELLRKADAGEE LKLSPWF+LVVDNFL K WDH+EKGT++E  D+++ H
Sbjct:    1 MGDAATDAGMDAVQKRLMFEDKCILVDENDNVVGHDTKYNCHLMEKIESENLLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIKENALGARNAAQRKLLDELGIPAEDVPVDQFIPLGRILYKAPSDGKWGEHELDYLLFIVRDVNVNPNPDEVADIKYVTRDQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTMHEAADMKSIH 232          
BLAST of EY753862 vs. ExPASy Swiss-Prot
Match: IDI2_CAMAC (Isopentenyl-diphosphate Delta-isomerase II OS=Camptotheca acuminata GN=IPI2 PE=2 SV=1)

HSP 1 Score: 413.305 bits (1061), Expect = 9.243e-115
Identity = 196/232 (84.48%), Postives = 213/232 (91.81%), Query Frame = 1
Query:  121 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNRGQLKELLRKADAGEESLKLSPWFKLVVDNFLXKGWDHLEKGTLNEVIDIETFH 816
            MGD  TDAGMDAVQRRLMFEDECILVDEND VVGH+ KYNCHLMEKIES NLLHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHP YRESEL++ENALGVRNAAQRKLLDELGI AEDVPVD+F PLGR+LYKAPSDGKWGEHELDYLLFI+RDV+V+PNPDEVA+ KYVN+ QLK+LLRK DAGEE LKLSPWF+LVV+NFL K WDH+EKGTL +  D++T H
Sbjct:   75 MGDTATDAGMDAVQRRLMFEDECILVDENDHVVGHDTKYNCHLMEKIESDNLLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPRYRESELVDENALGVRNAAQRKLLDELGIPAEDVPVDQFIPLGRMLYKAPSDGKWGEHELDYLLFIIRDVNVHPNPDEVADVKYVNQDQLKDLLRKVDAGEEGLKLSPWFRLVVENFLFKWWDHVEKGTLQDATDMKTIH 306          
BLAST of EY753862 vs. ExPASy Swiss-Prot
Match: IDI2_ARATH (Isopentenyl-diphosphate Delta-isomerase II OS=Arabidopsis thaliana GN=IPP2 PE=2 SV=1)

HSP 1 Score: 412.535 bits (1059), Expect = 1.577e-114
Identity = 198/228 (86.84%), Postives = 212/228 (92.98%), Query Frame = 1
Query:  133 TTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNRGQLKELLRKADAGEESLKLSPWFKLVVDNFLXKGWDHLEKGTLNEVIDIETFH 816
            T DAGMDAVQRRLMFEDECILVDE DRVVGH++KYNCHLME IE+ NLLHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI++NALGVRNAAQRKLLDELGI AEDVPVDEFTPLGR+LYKAPSDGKWGEHELDYLLFIVRDV V PNPDEVAE KYV+R +LKEL++KADAGEE LKLSPWF+LVVDNFL K WDH+EKGTL E ID++T H
Sbjct:   55 TKDAGMDAVQRRLMFEDECILVDETDRVVGHDSKYNCHLMENIEAKNLLHRAFSVFLFNSKYELLLQQRSNTKVTFPLVWTNTCCSHPLYRESELIQDNALGVRNAAQRKLLDELGIVAEDVPVDEFTPLGRMLYKAPSDGKWGEHELDYLLFIVRDVKVQPNPDEVAEIKYVSREELKELVKKADAGEEGLKLSPWFRLVVDNFLMKWWDHVEKGTLVEAIDMKTIH 282          
BLAST of EY753862 vs. ExPASy Swiss-Prot
Match: IDI2_CLAXA (Isopentenyl-diphosphate Delta-isomerase II OS=Clarkia xantiana GN=IPI2 PE=3 SV=1)

HSP 1 Score: 410.223 bits (1053), Expect = 7.825e-114
Identity = 196/233 (84.12%), Postives = 215/233 (92.27%), Query Frame = 1
Query:  121 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNRGQLKELLRKADAGEESLKLSPWFKLVVDNFLXKGWDHLEKGTLNEVIDIETFHS 819
            MG+A  DAGMDAVQRRLMF+DECILVDE D VVGHE+KYNCHL EKIES N+LHRAF+VFLFNSK+ELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+EN LGVRNAAQRKLLDELGI AEDVPVDEFTP+ R+LYKAPSDGKWGEHELDYLLFIVRDV ++PNPDEVA+ KYVNR QLKELLRKADAGEE LKLSPWF+LVVDNFL K WDH+EKGTL+E +D++T H+
Sbjct:   57 MGEAAADAGMDAVQRRLMFDDECILVDEVDCVVGHESKYNCHLWEKIESGNMLHRAFTVFLFNSKFELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIDENNLGVRNAAQRKLLDELGIPAEDVPVDEFTPVSRMLYKAPSDGKWGEHELDYLLFIVRDVGIHPNPDEVADIKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLPKWWDHVEKGTLSEAVDMKTIHN 289          
BLAST of EY753862 vs. ExPASy Swiss-Prot
Match: IDI2_CLABR (Isopentenyl-diphosphate Delta-isomerase II OS=Clarkia breweri GN=IPI2 PE=3 SV=2)

HSP 1 Score: 409.068 bits (1050), Expect = 1.743e-113
Identity = 198/232 (85.34%), Postives = 216/232 (93.10%), Query Frame = 1
Query:  121 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNRGQLKELLRKADAGEESLKLSPWFKLVVDNFLXKGWDHLEKGTLNEVIDIETFH 816
            MG+A  DAGMDAVQRRLMF+DECILVDE DRVVGHE+KYNCH+ EKIES N+LHRAFSVFLFNSK+ELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+EN LGVRNAAQRKLLDELGI AEDVPVDEFTPL R+LYKAPSDGKWGEHELDYLLFIVRDV+V+PNPDEVAE KYVNR QLKELL+KADAGEE LKLSPWF+LVVDNFL K WDH+EKGTL+E +D+++ H
Sbjct:   54 MGEAA-DAGMDAVQRRLMFDDECILVDEVDRVVGHESKYNCHMWEKIESGNMLHRAFSVFLFNSKFELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIDENNLGVRNAAQRKLLDELGIPAEDVPVDEFTPLSRMLYKAPSDGKWGEHELDYLLFIVRDVAVHPNPDEVAEIKYVNREQLKELLKKADAGEEGLKLSPWFRLVVDNFLPKWWDHVEKGTLSEAVDMKSIH 284          
BLAST of EY753862 vs. ExPASy Swiss-Prot
Match: IDI1_ARATH (Isopentenyl-diphosphate Delta-isomerase I OS=Arabidopsis thaliana GN=IPP1 PE=2 SV=2)

HSP 1 Score: 407.527 bits (1046), Expect = 5.072e-113
Identity = 193/228 (84.65%), Postives = 211/228 (92.54%), Query Frame = 1
Query:  133 TTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNRGQLKELLRKADAGEESLKLSPWFKLVVDNFLXKGWDHLEKGTLNEVIDIETFH 816
            + DAGMDAVQRRLMFEDECILVDENDRVVGH+ KYNCHLMEKIE+ NLLHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHPLYRESELIEEN LGVRNAAQRKL DELGI AEDVPVDEFTPLGR+LYKAPSDGKWGEHE+DYLLFIVRDV + PNPDEVAE KYV+R +LKEL++KADAG+E++KLSPWF+LVVDNFL K WDH+EKGT+ E  D++T H
Sbjct:    4 SNDAGMDAVQRRLMFEDECILVDENDRVVGHDTKYNCHLMEKIEAENLLHRAFSVFLFNSKYELLLQQRSKTKVTFPLVWTNTCCSHPLYRESELIEENVLGVRNAAQRKLFDELGIVAEDVPVDEFTPLGRMLYKAPSDGKWGEHEVDYLLFIVRDVKLQPNPDEVAEIKYVSREELKELVKKADAGDEAVKLSPWFRLVVDNFLMKWWDHVEKGTITEAADMKTIH 231          
BLAST of EY753862 vs. ExPASy Swiss-Prot
Match: IDI1_CLABR (Isopentenyl-diphosphate Delta-isomerase I OS=Clarkia breweri GN=IPI1 PE=2 SV=2)

HSP 1 Score: 405.601 bits (1041), Expect = 1.927e-112
Identity = 195/233 (83.69%), Postives = 213/233 (91.42%), Query Frame = 1
Query:  118 TMGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNRGQLKELLRKADAGEESLKLSPWFKLVVDNFLXKGWDHLEKGTLNEVIDIETFH 816
            TMG+   DAGMDAVQRRLMFEDECILVDEND+VVGHE+KYNCHLMEKIES NLLHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+EN LGVRNAAQRKLLDELGI AED+PVD+F PL RILYKAPSDGKWGEHELDYLLFI+RDV+++PNPDEVAE KY+NR  LKELLRKADA EE +KLSPWF+LVVDNFL K WDH+EKG+L +  D++T H
Sbjct:   54 TMGEVV-DAGMDAVQRRLMFEDECILVDENDKVVGHESKYNCHLMEKIESENLLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIDENCLGVRNAAQRKLLDELGIPAEDLPVDQFIPLSRILYKAPSDGKWGEHELDYLLFIIRDVNLDPNPDEVAEVKYMNRDDLKELLRKADAEEEGVKLSPWFRLVVDNFLFKWWDHVEKGSLKDAADMKTIH 285          
BLAST of EY753862 vs. ExPASy Swiss-Prot
Match: IDI1_MACFA (Isopentenyl-diphosphate Delta-isomerase 1 OS=Macaca fascicularis GN=IDI1 PE=2 SV=2)

HSP 1 Score: 240.736 bits (613), Expect = 8.211e-63
Identity = 126/232 (54.31%), Postives = 166/232 (71.55%), Query Frame = 1
Query:  121 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNRGQLKELLRKADAGEESLKLSPWFKLVVDNFLXKGWDHLEKGTLNEVIDIETFH 816
            M +  TD  +D  Q +L+ E  CIL+DEND  +G E K NCHL E IE   LLHRAFSVFLFN++ +LLLQQRS  K+TFP  +TNTCCSHPL    EL E +ALGVR AAQR+L  ELGI  E+VP +E   L RI YKA SDG WGEHE+DY+LF+ ++V++NP+P+E+  + YV++ +LKELL+KA  GE  +K++PWF+++ + FL K WD+L    LN+ +D E  H
Sbjct:    1 MPEINTDH-LDKQQVQLLAE-MCILIDENDNKIGAETKKNCHLNENIEK-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPGELEENDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILFVRKNVTLNPDPNEIKSFCYVSKEELKELLKKAANGE--IKITPWFQIIAETFLFKWWDNLNH--LNQFVDHEKIH 225          
BLAST of EY753862 vs. ExPASy Swiss-Prot
Match: IDI1_HUMAN (Isopentenyl-diphosphate Delta-isomerase 1 OS=Homo sapiens GN=IDI1 PE=1 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 3.120e-62
Identity = 123/223 (55.16%), Postives = 162/223 (72.65%), Query Frame = 1
Query:  148 MDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNRGQLKELLRKADAGEESLKLSPWFKLVVDNFLXKGWDHLEKGTLNEVIDIETFH 816
            +D  Q +L+ E  CIL+DEND  +G E K NCHL E IE   LLHRAFSVFLFN++ +LLLQQRS  K+TFP  +TNTCCSHPL   +EL E +ALGVR AAQR+L  ELGI  E+VP +E   L RI YKA SDG WGEHE+DY+L + ++V++NP+P+E+  Y YV++ +LKELL+KA +GE  +K++PWFK++   FL K WD+L    LN+ +D E  +
Sbjct:    9 LDKQQVQLLAE-MCILIDENDNKIGAETKKNCHLNENIEK-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRKNVTLNPDPNEIKSYCYVSKEELKELLKKAASGE--IKITPWFKIIAATFLFKWWDNLNH--LNQFVDHEKIY 225          
BLAST of EY753862 vs. ExPASy Swiss-Prot
Match: IDI1_BOVIN (Isopentenyl-diphosphate Delta-isomerase 1 OS=Bos taurus GN=IDI1 PE=2 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 3.120e-62
Identity = 127/232 (54.74%), Postives = 165/232 (71.12%), Query Frame = 1
Query:  121 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNRGQLKELLRKADAGEESLKLSPWFKLVVDNFLXKGWDHLEKGTLNEVIDIETFH 816
            M + +TD  +D  Q +LM E  CILVDENDR +G E K NCHL E IE   LLHRAFSVFLFN++ +LLLQQRS  K+TFP  +TNTCCSHPL   SEL E +A+GVR AAQR+L  ELGI  E+VP +E   L RI YKA SD  WGEHE+DY+L + ++V++NP+P+E+  Y YV + +L+EL+ KA  GE  +K++PWF+++ D FL K WD+L +  LN  +D E  H
Sbjct:    1 MPEVSTD-DLDERQVQLMAE-MCILVDENDRRIGAETKKNCHLNENIER-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPSELEENDAIGVRRAAQRRLKAELGIPMEEVPPEEINYLTRIHYKAQSDSIWGEHEIDYILLVKKNVTLNPDPNEIKSYCYVTKEELEELIGKAAHGE--IKITPWFQIIADTFLFKWWDNLNR--LNLFVDHEKIH 225          
The following BLAST results are available for this feature:
BLAST of EY753862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
IDI1_CAMAC1.290e-11686.64Isopentenyl-diphosphate Delta-isomerase I OS=Campt... [more]
IDI2_CAMAC9.243e-11584.48Isopentenyl-diphosphate Delta-isomerase II OS=Camp... [more]
IDI2_ARATH1.577e-11486.84Isopentenyl-diphosphate Delta-isomerase II OS=Arab... [more]
IDI2_CLAXA7.825e-11484.12Isopentenyl-diphosphate Delta-isomerase II OS=Clar... [more]
IDI2_CLABR1.743e-11385.34Isopentenyl-diphosphate Delta-isomerase II OS=Clar... [more]
IDI1_ARATH5.072e-11384.65Isopentenyl-diphosphate Delta-isomerase I OS=Arabi... [more]
IDI1_CLABR1.927e-11283.69Isopentenyl-diphosphate Delta-isomerase I OS=Clark... [more]
IDI1_MACFA8.211e-6354.31Isopentenyl-diphosphate Delta-isomerase 1 OS=Macac... [more]
IDI1_HUMAN3.120e-6255.16Isopentenyl-diphosphate Delta-isomerase 1 OS=Homo ... [more]
IDI1_BOVIN3.120e-6254.74Isopentenyl-diphosphate Delta-isomerase 1 OS=Bos t... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-G06-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753862 ID=EY753862; Name=EY753862; organism=Citrus sinensis; type=EST; length=887bp
CGTCTATTTTTCTCCTCTTCCCATTTCGCCCCTACGGTTTCTTCGATTCG
CAGGCCTCTGTCCTTGAGAGGTGCCTCTCGTTCTAGCTCTTCTTCTTCTT
CCGCTCGCGCAATCAGCACTATGGGTGACGCTACTACTGATGCCGGCATG
GACGCTGTCCAGCGCCGCCTCATGTTTGAAGACGAATGCATTTTGGTGGA
TGAGAATGATCGCGTTGTTGGTCATGAAAACAAATACAACTGTCACTTGA
TGGAAAAGATTGAGTCTTTGAATTTGCTACACAGAGCCTTCAGCGTATTT
TTGTTTAACTCAAAATATGAGCTACTCCTTCAGCAACGCTCTGGAACCAA
AGTTACCTTCCCTCTTGTGTGGACTAACACCTGCTGCAGCCATCCTCTGT
ACCGTGAATCTGAGCTTATTGAGGAGAACGCTCTTGGGGTGAGGAATGCT
GCACAAAGAAAGCTTTTGGATGAGCTGGGCATTTGTGCTGAAGATGTGCC
AGTTGATGAGTTCACTCCACTGGGTCGCATTCTGTACAAGGCCCCTTCTG
ATGGCAAGTGGGGGGAGCATGAACTTGACTACTTACTTTTCATTGTCCGA
GATGTTAGTGTTAACCCAAATCCTGATGAAGTAGCCGAGTATAAATATGT
CAACCGGGGACAGTTAAAAGAGCTTTTGAGGAAAGCAGATGCTGGAGAAG
AAAGTTTGAAGCTGTCTCCTTGGTTCAAACTGGTTGTGGACAATTTCTTG
NTCAAGGGGTGGGATCACCTCGAAAAAGGTACCCTTAACGAAGTCATTGA
CATTGAGACCTTTCACAGTTGACTTAATAAAGCCGCAGCCCTTGAAACCC
ANTATTTGGGGGCGGAACCTGTATTCCATAAGTTGGG
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