GE213198
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GE213198 vs. ExPASy Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.010e-23 Identity = 50/66 (75.76%), Postives = 53/66 (80.30%), Query Frame = 2 Query: 23 SSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCT 220 SSFHRVIPGFMCQ ESIYG+KFADENF+KKHTGPGILSMANAGP TNGSQFF+CT Sbjct: 58 SSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPNTNGSQFFICT 123
BLAST of GE213198 vs. ExPASy Swiss-Prot
Match: CYPH_ALLCE (Peptidyl-prolyl cis-trans isomerase OS=Allium cepa GN=CYP PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.010e-23 Identity = 49/66 (74.24%), Postives = 53/66 (80.30%), Query Frame = 2 Query: 23 SSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCT 220 SSFHRVIPGFMCQ ESIYG+KF DENF+KKHTGPG+LSMANAGPGTNGSQFF+CT Sbjct: 36 SSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFKDENFIKKHTGPGVLSMANAGPGTNGSQFFICT 101
BLAST of GE213198 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.722e-23 Identity = 50/66 (75.76%), Postives = 53/66 (80.30%), Query Frame = 2 Query: 23 SSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCT 220 S+FHRVIPGFMCQ ESIYG+KF DENFVKKHTGPGILSMANAGPGTNGSQFF+CT Sbjct: 58 STFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKKHTGPGILSMANAGPGTNGSQFFICT 123
BLAST of GE213198 vs. ExPASy Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.242e-22 Identity = 47/66 (71.21%), Postives = 52/66 (78.79%), Query Frame = 2 Query: 23 SSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCT 220 S+FHRVIP FMCQ ESIYG+KFADENF+K+HTGPGILSMANAG GTNGSQFF+CT Sbjct: 58 STFHRVIPNFMCQGGDFTAGNGTGAESIYGAKFADENFIKRHTGPGILSMANAGAGTNGSQFFICT 123
BLAST of GE213198 vs. ExPASy Swiss-Prot
Match: PPIA_RAT (Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus GN=Ppia PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 1.234e-21 Identity = 46/66 (69.70%), Postives = 50/66 (75.76%), Query Frame = 2 Query: 23 SSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCT 220 SSFHR+IPGFMCQ +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CT Sbjct: 51 SSFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICT 116
BLAST of GE213198 vs. ExPASy Swiss-Prot
Match: CP19A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.234e-21 Identity = 48/66 (72.73%), Postives = 50/66 (75.76%), Query Frame = 2 Query: 23 SSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCT 220 SSFHRVIP FMCQ ESIYGSKF DENF+KKHTGPGILSMANAG TNGSQFF+CT Sbjct: 59 SSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICT 124
BLAST of GE213198 vs. ExPASy Swiss-Prot
Match: PPIA_MOUSE (Peptidyl-prolyl cis-trans isomerase A OS=Mus musculus GN=Ppia PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 1.612e-21 Identity = 46/66 (69.70%), Postives = 49/66 (74.24%), Query Frame = 2 Query: 23 SSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCT 220 SSFHR+IPGFMCQ SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CT Sbjct: 51 SSFHRIIPGFMCQGGDFTRHNGTGGRSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICT 116
BLAST of GE213198 vs. ExPASy Swiss-Prot
Match: PPIA_CRIGR (Peptidyl-prolyl cis-trans isomerase A OS=Cricetulus griseus GN=PPIA PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 1.612e-21 Identity = 46/66 (69.70%), Postives = 49/66 (74.24%), Query Frame = 2 Query: 23 SSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCT 220 SSFHR+IPGFMCQ SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CT Sbjct: 51 SSFHRIIPGFMCQGGDFTRHNGTGGRSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICT 116
BLAST of GE213198 vs. ExPASy Swiss-Prot
Match: CP19C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 2.750e-21 Identity = 46/66 (69.70%), Postives = 50/66 (75.76%), Query Frame = 2 Query: 23 SSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCT 220 S+FHR+IPGFMCQ ESIYGSKF DENF KHTGPGILSMAN+GP TNGSQFF+CT Sbjct: 58 SAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICT 123
BLAST of GE213198 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.591e-21 Identity = 46/66 (69.70%), Postives = 50/66 (75.76%), Query Frame = 2 Query: 23 SSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCT 220 S FHRVIPGFMCQ ESIYG+KF DENF+KKHTG GILSMAN+GP TNGSQFF+CT Sbjct: 58 SIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICT 123 The following BLAST results are available for this feature:
BLAST of GE213198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 154
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Sequences
The
following sequences are available for this feature:
EST sequence >GE213198 ID=GE213198; Name=GE213198; organism=Citrus sinensis; type=EST; length=238bpback to top |