GE213197
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GE213197 vs. ExPASy Swiss-Prot
Match: RL13A_LUPLU (60S ribosomal protein L13a OS=Lupinus luteus GN=RPL13A PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.743e-28 Identity = 59/68 (86.76%), Postives = 65/68 (95.59%), Query Frame = -2 Query: 109 RYCLLGRLAFEVGWNYYDTIRELEKKRKERSQVAYERKKQLNKLRAKAEKVAEEKLGSQLDILAPVKY 312 +YCLLG+L+ EVGWNYYDTI+ELEKKRKERSQV YERKKQLNKLR KAE+VA+EKLGSQLDILAPVKY Sbjct: 138 KYCLLGQLSSEVGWNYYDTIKELEKKRKERSQVVYERKKQLNKLRVKAEQVAQEKLGSQLDILAPVKY 205
BLAST of GE213197 vs. ExPASy Swiss-Prot
Match: R13A3_ARATH (60S ribosomal protein L13a-3 OS=Arabidopsis thaliana GN=RPL13AC PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.625e-28 Identity = 58/68 (85.29%), Postives = 64/68 (94.12%), Query Frame = -2 Query: 109 RYCLLGRLAFEVGWNYYDTIRELEKKRKERSQVAYERKKQLNKLRAKAEKVAEEKLGSQLDILAPVKY 312 +YCLLGRL+ EVGWN+YDTI+ELE KRKERSQV YERKKQLNKLR KAEKVAEE+LGSQLD+LAPVKY Sbjct: 139 KYCLLGRLSSEVGWNHYDTIKELETKRKERSQVMYERKKQLNKLRTKAEKVAEERLGSQLDVLAPVKY 206
BLAST of GE213197 vs. ExPASy Swiss-Prot
Match: R13A1_ARATH (60S ribosomal protein L13a-1 OS=Arabidopsis thaliana GN=RPL13AA PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.476e-27 Identity = 57/68 (83.82%), Postives = 64/68 (94.12%), Query Frame = -2 Query: 109 RYCLLGRLAFEVGWNYYDTIRELEKKRKERSQVAYERKKQLNKLRAKAEKVAEEKLGSQLDILAPVKY 312 +YCLLGRL+ EVGWN+YDTI+ELE KRKER+Q YERKKQL+KLRAKAEKVAEEKLGSQLD+LAPVKY Sbjct: 139 KYCLLGRLSSEVGWNHYDTIKELENKRKERAQAVYERKKQLSKLRAKAEKVAEEKLGSQLDVLAPVKY 206
BLAST of GE213197 vs. ExPASy Swiss-Prot
Match: R13A4_ARATH (60S ribosomal protein L13a-4 OS=Arabidopsis thaliana GN=RPL13AD PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 3.288e-27 Identity = 57/68 (83.82%), Postives = 63/68 (92.65%), Query Frame = -2 Query: 109 RYCLLGRLAFEVGWNYYDTIRELEKKRKERSQVAYERKKQLNKLRAKAEKVAEEKLGSQLDILAPVKY 312 +YCLLGRL+ EVGWN+YDTI+ELE KRKER+ V YERKKQLNKLR KAEKVAEEKLG+QLDILAPVKY Sbjct: 139 KYCLLGRLSSEVGWNHYDTIKELETKRKERAHVVYERKKQLNKLRVKAEKVAEEKLGAQLDILAPVKY 206
BLAST of GE213197 vs. ExPASy Swiss-Prot
Match: R13A2_ARATH (60S ribosomal protein L13a-2 OS=Arabidopsis thaliana GN=RPL13AB PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.131e-26 Identity = 56/68 (82.35%), Postives = 62/68 (91.18%), Query Frame = -2 Query: 109 RYCLLGRLAFEVGWNYYDTIRELEKKRKERSQVAYERKKQLNKLRAKAEKVAEEKLGSQLDILAPVKY 312 +YCLLGRL+ EVGWN+YDTI+ELE KRKERSQ YERKKQL KLRAKAEKVAEEKLGSQLD+LA +KY Sbjct: 139 KYCLLGRLSSEVGWNHYDTIKELEVKRKERSQALYERKKQLTKLRAKAEKVAEEKLGSQLDVLASIKY 206
BLAST of GE213197 vs. ExPASy Swiss-Prot
Match: RL13A_PICMA (60S ribosomal protein L13a OS=Picea mariana GN=RPL13A PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.136e-18 Identity = 40/68 (58.82%), Postives = 60/68 (88.24%), Query Frame = -2 Query: 109 RYCLLGRLAFEVGWNYYDTIRELEKKRKERSQVAYERKKQLNKLRAKAEKVAEEKLGSQLDILAPVKY 312 +YCLLGRL+ EVGW+++DTI ELE+KRK ++QV+YER+KQL KLR+KA ++AE++L ++++LA +KY Sbjct: 139 KYCLLGRLSKEVGWHHFDTITELEEKRKAKAQVSYERRKQLAKLRSKAVELAEKQLAPEMELLASLKY 206
BLAST of GE213197 vs. ExPASy Swiss-Prot
Match: RL13A_BOVIN (60S ribosomal protein L13a OS=Bos taurus GN=RPL13A PE=2 SV=3) HSP 1 Score: 65.855 bits (159), Expect = 7.358e-11 Identity = 30/63 (47.62%), Postives = 44/63 (69.84%), Query Frame = -2 Query: 124 RYCLLGRLAFEVGWNYYDTIRELEKKRKERSQVAYERKKQLNKLRAKAEKVAEEKLGSQLDIL 312 ++ LGRLA EVGW Y LE+KRKE++++ Y +KKQL +LR +AEK E+K+G ++L Sbjct: 134 KFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNIEKKIGKFTEVL 196 The following BLAST results are available for this feature:
BLAST of GE213197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GE213197 ID=GE213197; Name=GE213197; organism=Citrus sinensis; type=EST; length=319bpback to top |