EY753820

Overview
NameEY753820
Unique NameEY753820
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9397 contig Csv1_Contig9397:498..1404. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753820 vs. ExPASy Swiss-Prot
Match: ERI2_HUMAN (ERI1 exoribonuclease 2 OS=Homo sapiens GN=ERI2 PE=2 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 9.777e-35
Identity = 83/205 (40.49%), Postives = 121/205 (59.02%), Query Frame = 3
Query:    6 VVIDFEATCDKD-KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNFAV---------------VTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLXDAKNTARLLALLMHRGFKFSITNSL 569
            +VIDFE+TC  D K+ + QEIIEFP+V++++ TGQ+++ FQ YV+P  + +LS+FC +LTGI+Q QVD GV L   L +  KW+   +  KN  FA                VTWS+WD  V LE EC+ K++ KP + N WI+L+  +   +      L  A++  G+ + GR H GL D++NTA L   ++  G    IT SL
Sbjct:   38 IVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSEFCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPSASEVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCVMKITRSL 242          
BLAST of EY753820 vs. ExPASy Swiss-Prot
Match: ERI2_XENLA (ERI1 exoribonuclease 2 OS=Xenopus laevis GN=eri2 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.277e-34
Identity = 81/204 (39.71%), Postives = 118/204 (57.84%), Query Frame = 3
Query:    6 VVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE----NKGI------------KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLXDAKNTARLLALLMHRGFKFSITNSL 569
            ++IDFE+TC KD     QEIIEFP+V+++   G++E+ F TYV+P  + +LSDFC +LTGI Q QVD GV L   L + + W++     KGI            ++   A VTWS+WD  V L  ECR K++ KP   N WI+L+  +   +      L  A++  G+ + GR H GL D++NTA+L + ++  G    IT SL
Sbjct:   39 IIIDFESTCWKDGKHSTQEIIEFPAVLLNVSNGEIESEFHTYVQPQEHPILSDFCTELTGINQQQVDDGVPLKICLSQFNSWIQKLQKEKGIAFVTAVPTHSTAEHKMCAFVTWSDWDLGVCLLYECRRKQMKKPDILNSWIDLRATYKLFYNRRPKGLNGALQDLGIEFSGREHSGLDDSRNTAKLASRMICDGCVMKITKSL 242          
BLAST of EY753820 vs. ExPASy Swiss-Prot
Match: ERI2_MOUSE (ERI1 exoribonuclease 2 OS=Mus musculus GN=Eri2 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.081e-33
Identity = 80/205 (39.02%), Postives = 119/205 (58.05%), Query Frame = 3
Query:    6 VVIDFEATCDKD-KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAV---------------VTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLXDAKNTARLLALLMHRGFKFSITNSL 569
            +V+DFE+TC  D K+    EIIEFP+V++++ TG++E+ F  YV+P  + +LS+FC +LTGI+Q+QVD GV L   L +  KW+     + T +FA                VTWS+WD  V LE ECR K++ KP + N WI+L+  +   +      L  A++  G+ + GR H GL D++NTA L   ++  G    IT SL
Sbjct:   38 IVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSEFCTELTGIKQVQVDEGVPLKICLSQFCKWIHKLQQQQTISFAAGDSEPSTSEVKLCAFVTWSDWDLGVCLEYECRRKQLLKPVFLNSWIDLRATYRLFYKRKPKGLSGALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCLMKITRSL 242          
BLAST of EY753820 vs. ExPASy Swiss-Prot
Match: ERI1_HUMAN (3'-5' exoribonuclease 1 OS=Homo sapiens GN=ERI1 PE=1 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 7.251e-30
Identity = 69/191 (36.13%), Postives = 108/191 (56.54%), Query Frame = 3
Query:    9 VIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLXDAKNTARLLALLMHRGFKFSITNSL 569
            +IDFEATC++   P +  EIIEFP V++++ T ++E  FQ YVRP  N  LSDFC  LTGI Q QVDR  T  + L +   W++ K +     ++++T  +WD    L  +C+  ++  PP+  +WIN++  +   +   R   K  +  E  G+ + GR HCGL D+KN AR+   ++  G +  I   +
Sbjct:  132 IIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIARIAVRMLQDGCELRINEKM 322          
BLAST of EY753820 vs. ExPASy Swiss-Prot
Match: ERI3_HUMAN (ERI1 exoribonuclease 3 OS=Homo sapiens GN=ERI3 PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 1.237e-29
Identity = 73/190 (38.42%), Postives = 109/190 (57.37%), Query Frame = 3
Query:    3 FVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLXDAKNTARLLALLMHRGFKFSITN 563
            F+V+DFEATCDK +  +PQEIIEFP + ++  T ++E+ F  YV+P  +  L+ FC +LTGI Q  VD   +L + L R D+W+  +G+   N     VT  +WD +VML  +C++  +    YF +WINLK  +    G   +  L +  +   L   GR H G+ D KN A ++  L +RGF F  T+
Sbjct:  146 FLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTS 334          
BLAST of EY753820 vs. ExPASy Swiss-Prot
Match: ERI3_BOVIN (ERI1 exoribonuclease 3 OS=Bos taurus GN=ERI3 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.237e-29
Identity = 73/190 (38.42%), Postives = 109/190 (57.37%), Query Frame = 3
Query:    3 FVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLXDAKNTARLLALLMHRGFKFSITN 563
            F+V+DFEATCDK +  +PQEIIEFP + ++  T ++E+ F  YV+P  +  L+ FC +LTGI Q  VD   +L + L R D+W+  +G+   N     VT  +WD +VML  +C++  +    YF +WINLK  +    G   +  L +  +   L   GR H G+ D KN A ++  L +RGF F  T+
Sbjct:  146 FLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTS 334          
BLAST of EY753820 vs. ExPASy Swiss-Prot
Match: ERI3_MOUSE (ERI1 exoribonuclease 3 OS=Mus musculus GN=Eri3 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.615e-29
Identity = 73/190 (38.42%), Postives = 108/190 (56.84%), Query Frame = 3
Query:    3 FVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLXDAKNTARLLALLMHRGFKFSITN 563
            F+V+DFEATCDK +  +PQEIIEFP + ++  T ++E+ F  YV+P  +  L+ FC +LTGI Q  VD   +L + L R D+W+  +G+   N     VT  +WD +VML  +C +  +    YF +WINLK  +    G   +  L +  +   L   GR H G+ D KN A ++  L +RGF F  T+
Sbjct:  146 FLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCHYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTS 334          
BLAST of EY753820 vs. ExPASy Swiss-Prot
Match: ERI2_DANRE (ERI1 exoribonuclease 2 OS=Danio rerio GN=eri2 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.110e-29
Identity = 76/201 (37.81%), Postives = 111/201 (55.22%), Query Frame = 3
Query:    6 VVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL----ENKGI-----------KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLXDAKNTARLLALLMHRGFKFSITN 563
            ++IDFE+TC ++K+   QEIIEFP+V++S  +G +E+ F +YV+P    +LS FC +LTGI Q QVD    L   L R  +WL    E +G+                A VTWS+WD  V L  EC+ K++  P     WI+L+  +   +      L+ A+   G+ + GR H GL DA+NTA L   +M  G + SIT+
Sbjct:   36 IIIDFESTCWREKSSSGQEIIEFPAVLLSVCSGAVESEFHSYVQPQERPVLSAFCTELTGITQDQVDSAPPLHVVLSRFSRWLRSLQEERGVVFLTDSSGAAPSAQLCAFVTWSDWDLGVCLLYECKRKQLSVPEALKNWIDLRATYKLFYNRKPKGLRGALLDLGIEFTGREHSGLVDARNTALLAQRMMTDGCQLSITS 236          
BLAST of EY753820 vs. ExPASy Swiss-Prot
Match: ERI1_MOUSE (3'-5' exoribonuclease 1 OS=Mus musculus GN=Eri1 PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.512e-27
Identity = 67/193 (34.72%), Postives = 108/193 (55.96%), Query Frame = 3
Query:    9 VIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLXDAKNTARLLALLMHRGFKFSITNSLM 572
            +IDFEATC++  NP  +  EIIEFP V++++ T ++E  FQ YVRP  N  LS+FC  LTGI Q QVDR     + L +  +W+++K +     + ++T  +WD    L  +CR  ++  P +  +WIN++  +   +   R   K  +  E  G+ + GR H GL D+KN AR+   ++  G +  I   ++
Sbjct:  128 IIDFEATCEEG-NPAEFLHEIIEFPVVLLNTHTLEIEDTFQQYVRPEVNAQLSEFCIGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLSIQCRLSRLKHPAFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIAVRMLQDGCELRINEKIL 319          
BLAST of EY753820 vs. ExPASy Swiss-Prot
Match: ERI1_RAT (3'-5' exoribonuclease 1 OS=Rattus norvegicus GN=Eri1 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.280e-26
Identity = 66/192 (34.38%), Postives = 107/192 (55.73%), Query Frame = 3
Query:    9 VIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLXDAKNTARLLALLMHRGFKFSITNSL 569
            +IDFEATC++  NP  +  EIIEFP V++++ + ++E  FQ YVRP  N  LS+FC  LTGI Q QVDR     + L +  +W+++K +     + ++T  +WD    L  +C+  ++  P +  +WIN++  +   +   R   K  +  E  G+ + GR H GL D+KN AR+   ++  G +  I   L
Sbjct:  128 IIDFEATCEEG-NPAEFLHEIIEFPVVLLNTHSLEIEDTFQQYVRPEVNSQLSEFCIGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLNIQCQLSRLKYPSFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIAVRMLQDGCELRINEKL 318          
The following BLAST results are available for this feature:
BLAST of EY753820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
ERI2_HUMAN9.777e-3540.49ERI1 exoribonuclease 2 OS=Homo sapiens GN=ERI2 PE=... [more]
ERI2_XENLA8.277e-3439.71ERI1 exoribonuclease 2 OS=Xenopus laevis GN=eri2 P... [more]
ERI2_MOUSE1.081e-3339.02ERI1 exoribonuclease 2 OS=Mus musculus GN=Eri2 PE=... [more]
ERI1_HUMAN7.251e-3036.133'-5' exoribonuclease 1 OS=Homo sapiens GN=ERI1 PE... [more]
ERI3_HUMAN1.237e-2938.42ERI1 exoribonuclease 3 OS=Homo sapiens GN=ERI3 PE=... [more]
ERI3_BOVIN1.237e-2938.42ERI1 exoribonuclease 3 OS=Bos taurus GN=ERI3 PE=2 ... [more]
ERI3_MOUSE1.615e-2938.42ERI1 exoribonuclease 3 OS=Mus musculus GN=Eri3 PE=... [more]
ERI2_DANRE2.110e-2937.81ERI1 exoribonuclease 2 OS=Danio rerio GN=eri2 PE=2... [more]
ERI1_MOUSE1.512e-2734.723'-5' exoribonuclease 1 OS=Mus musculus GN=Eri1 PE... [more]
ERI1_RAT1.280e-2634.383'-5' exoribonuclease 1 OS=Rattus norvegicus GN=Er... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-C08-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753820 ID=EY753820; Name=EY753820; organism=Citrus sinensis; type=EST; length=907bp
ATTTTGTGGTAATAGACTTTGAGGCTACTTGCGACAAGGACAAGAATCCT
TATCCCCAGGAGATAATCGAGTTTCCATCTGTCATTGTGAGTAGTGTAAC
TGGTCAACTGGAAGCATGTTTTCAGACATATGTGCGGCCGACTTGCAATC
AACTACTGAGTGATTTCTGCAAGGATCTGACAGGTATCCAGCAAATTCAG
GTGGACAGAGGTGTTACTCTAAGCGAGGCTTTACTTAGGCATGACAAATG
GCTTGAGAATAAGGGCATAAAAAACACCAACTTTGCTGTCGTGACATGGT
CAAATTGGGATTGTCGGGTAATGTTGGAATCTGAATGCCGATTCAAAAAG
ATTTGGAAACCTCCTTATTTTAACAGATGGATCAACTTAAAAGTTCCATT
TCATGAGGTTTTTGGTGGAGTGAGGTGCAATTTAAAAGAAGCTGTTGAGA
TGGCAGGCCTGGCATGGCAAGGCCGTGCACACTGTGGCCTANATGATGCG
AAAAATACTGCTCGCCTACTTGCACTCCTCATGCACAGAGGTTTCAAATT
CTCCATTACAAACTCTTTGATGTGGCAGACAAATGATGGTTCTCTGACAT
GGAATCAGTTCCCTGAACGCATATTTCTTCCACCACATCAGTTGCACAAA
CAAAAGGATCTGNCAAATTCCATATTCCAGTATCATCCTANTTGTTTTTG
TGGGGGTGAAGAGCANCAAAGGGATGGTTTCGAAGCCTGGACCAAAACAG
GGAGTGGTTTCTTTTGGTGCGGGAACTGGACTGTCACTTAGAGTGCCCGC
TGTCTTTTCTTTGAATGGCCTTTACTACTGCTGGACTGGAAGNTATGAAA
GATTTCTCATCTTTTCTGGAGGACTCTTAACTCTTAATAAAGTCTTATGT
AAAGGAA
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