EY753781

Overview
NameEY753781
Unique NameEY753781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753781 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.894e-17
Identity = 50/143 (34.97%), Postives = 76/143 (53.15%), Query Frame = 1
Query:  256 DIPPNTKLPLIIYFHGGGYILYSADAFILHNSCCQLAAFIPALILSGDYRLAPEHRLPAAFDDAMESIQWVRDQALGDPWLIDYADL-SKSFLMGPTSGGGTAYHAGLRALDLDADPSSPVKIVRLALYSPFFGGAHRTATEK 681
            D P     P+II+FHGG ++  SA + I  + C +       +++S +YR APEHR P A+DD   +++WV  Q    P++    D  ++ FL G +SGG  A+H  +RA D        VK+    L +  FGG  RT +E+
Sbjct:  106 DAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQ----PFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAAD------EGVKVCGNILLNAMFGGTERTESER 238          
BLAST of EY753781 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.474e-17
Identity = 64/203 (31.53%), Postives = 104/203 (51.23%), Query Frame = 1
Query:  121 DGSLTRH-NKF--PTVPPSASITDQLALSKDVPLNPQSKTFLRLFKPKDI---PPNTKL---------PLIIYFHGGGYILYSADAFILHNSCCQLAAFIPALILSGDYRLAPEHRLPAAFDDAMESIQWVRDQALGDPWLIDYADLS-KSFLMGPTSGGGTAYHAGLRALDLDADPSSPVKIVRLALYSPFFGGAHRTATEK 681
            DG+  RH  +F    VP +A+  + +  S DV ++ Q+    R+++P D    P  T L         P+I++FHGG +   SA++ I    C +L     A+++S +YR APE+R P A+DD    ++WV   +    WL    D   + FL G +SGG   ++  +RA++      S + ++   L +P FGG  RT +EK
Sbjct:   38 DGTFNRHLAEFLDRKVPANANPVNGV-FSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNSSS----WLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVE------SRIDVLGNILLNPMFGGTERTESEK 229          
BLAST of EY753781 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.402e-17
Identity = 52/151 (34.44%), Postives = 80/151 (52.98%), Query Frame = 1
Query:  235 LRLFKPKDIPPNTKLPLIIYFHGGGYILYSADAFILHNSCCQLAAFIPALILSGDYRLAPEHRLPAAFDDAMESIQWVRDQALGDPWLIDYADLS-KSFLMGPTSGGGTAYHAGLRALDLDADPSSPVKIVRLALYSPFFGGAHRTATEKT 684
            L L KP  +     +P++I+FHGG +   SA++ I    C +L      +++S DYR +PEHR P A+DD   ++ WV+ +     WL    D +   +L G +SGG  A++  +RA       +  VK++   L  P FGG  RT +EKT
Sbjct:   94 LELTKP--LSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRV----WLQSGKDSNVYVYLAGDSSGGNIAHNVAVRA------TNEGVKVLGNILLHPMFGGQERTQSEKT 232          
BLAST of EY753781 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.950e-15
Identity = 57/179 (31.84%), Postives = 86/179 (48.04%), Query Frame = 1
Query:  220 QSKTFLRLFKPKDIPPNTKLPLIIYFHGGGYILYSADAFILHNSCCQLAAFIPALILSGDYRLAPEHRLPAAFDDAMESIQWVRDQALGDPWLIDYADLS-KSFLMGPTSGGGTAYHAGLRALDLDADPSSPVKIVRLALYSPFFGGAHRTATEKTWSTTRL*PVTAPDLMRDLVLPKG 753
            Q  + L L KP D      +P+I++FHGG +   SA++ I    C +L      +++S +YR APE+  P A+DD   ++ WV  ++    WL    D     FL G +SGG  A++  LRA        S + ++   L +P FGG  RT +EK+        V   D      LP+G
Sbjct:   90 QPPSILDLEKPVD---GDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRS----WLKSKKDSKVHIFLAGDSSGGNIAHNVALRA------GESGIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEG 255          
The following BLAST results are available for this feature:
BLAST of EY753781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
GID1_ORYSJ1.894e-1734.97Gibberellin receptor GID1 OS=Oryza sativa subsp. j... [more]
GI1L3_ARATH2.474e-1731.53Probable gibberellin receptor GID1L3 OS=Arabidopsi... [more]
GI1L2_ARATH9.402e-1734.44Probable gibberellin receptor GID1L2 OS=Arabidopsi... [more]
GI1L1_ARATH3.950e-1531.84Probable gibberellin receptor GID1L1 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-006-G12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753781 ID=EY753781; Name=EY753781; organism=Citrus sinensis; type=EST; length=921bp
GGCGGNATTACAAGCCCGACCCACGCGTCCGGAAGTAACTTTCTGGCGGC
AATGGCAGTAAGAGACACACTCAATGTTCCGTCAACCCTTTTGAGTTACT
CAAAATCCTCCCTCAACTCGGACGGCTCACTCACGAGACACAACAAATTC
CCCACTGTTCCGCCCTCGGCATCGATAACCGACCAGCTCGCCCTCTCCAA
AGATGTCCCACTCAACCCCCAAAGCAAAACTTTCCTTCGCTTATTTAAAC
CCAAGGATATTCCCCCCAACACAAAGCTCCCTCTTATTATATACTTCCAT
GGCGGCGGCTACATTTTGTACAGTGCTGACGCTTTCATTCTTCACAACTC
GTGCTGCCAACTGGCGGCTTTTATCCCCGCTTTAATCCTGTCGGGTGATT
ACCGTCTCGCCCCCGAACACCGACTTCCTGCAGCCTTTGATGACGCCATG
GAATCCATCCAGTGGGTCCGCGACCAGGCTCTTGGTGACCCGTGGCTGAT
AGATTACGCCGATCTATCCAAGAGTTTTCTGATGGGCCCCACCTCTGGCG
GTGGCACCGCTTACCATGCCGGGTTACGTGCCTTGGACTTGGATGCTGAT
CCCTCTTCNCCGGTGAAGATCGTACGGCTCGCGCTTTATTCTCCTTTTTT
CGGCGGGGCCCATAGGACTGCAACGGAGAAAACATGGTCGACCACAAGGC
TCTGACCGGTGACTGCACCGGACCTCATGCGGGACCTCGTCCTGCCAAAG
GGGCGGGTCGCGACCCTGATCTCGCAATTCCACCGCACGGGCGGAACTAC
CGACAAACCGGACGGGGACAATTATTTTGCGGAAGACACGAGGGGACCCC
GTGAAGGCACCAAAAAAAGTTCCCCAAAGTATAGCGCCAACGCGCCGGGG
GCCCACTTAGAAAGTTCCCCT
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