EY727137

Overview
NameEY727137
Unique NameEY727137
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length587
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY727137 vs. ExPASy Swiss-Prot
Match: RL34_PEA (60S ribosomal protein L34 OS=Pisum sativum GN=RPL34 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.774e-47
Identity = 92/95 (96.84%), Postives = 93/95 (97.89%), Query Frame = 2
Query:   29 MVQRLTYRTRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 313
            MVQRLTYR RHSYATKSNQHRVVKTPGGKLVYQ+TKKRASGPKCPVTGKRIQGIPHLRP EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF
Sbjct:    1 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 95          
BLAST of EY727137 vs. ExPASy Swiss-Prot
Match: RL34_TOBAC (60S ribosomal protein L34 OS=Nicotiana tabacum GN=RPL34 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 5.163e-47
Identity = 91/95 (95.79%), Postives = 92/95 (96.84%), Query Frame = 2
Query:   29 MVQRLTYRTRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 313
            MVQRLTYR RHSYATKSNQHRVVKTPGGKL+YQSTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRLSRNRRTVNRAYGGVLSG AVRERIIRAF
Sbjct:    1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95          
BLAST of EY727137 vs. ExPASy Swiss-Prot
Match: RL341_ARATH (60S ribosomal protein L34-1 OS=Arabidopsis thaliana GN=RPL34A PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.962e-46
Identity = 89/95 (93.68%), Postives = 93/95 (97.89%), Query Frame = 2
Query:   29 MVQRLTYRTRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 313
            MVQRL YR+RHSYATKSNQHR+VKTPGGKLVYQ+TKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRLSRNRRTVNRAYGGVLSG AVRERIIRAF
Sbjct:    1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPSEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95          
BLAST of EY727137 vs. ExPASy Swiss-Prot
Match: RL342_ARATH (60S ribosomal protein L34-2 OS=Arabidopsis thaliana GN=RPL34B PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 7.455e-46
Identity = 88/95 (92.63%), Postives = 91/95 (95.79%), Query Frame = 2
Query:   29 MVQRLTYRTRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 313
            MVQRL YR+RHSYATKSNQHR+VKTPGGKL YQ+TKKRASGPKCPVTGKRIQGIPHLRP EYKRSRLSRNRRTVNRAYGGVLSG AVRERIIRAF
Sbjct:    1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95          
BLAST of EY727137 vs. ExPASy Swiss-Prot
Match: RL343_ARATH (60S ribosomal protein L34-3 OS=Arabidopsis thaliana GN=RPL34C PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.398e-44
Identity = 85/95 (89.47%), Postives = 90/95 (94.74%), Query Frame = 2
Query:   29 MVQRLTYRTRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 313
            MVQRL YR+RHSYATKSNQHR+VKTPGGKL YQ+T KRASGPKCPVTGKRIQGIPHLRPAEYKRSRL+RN RTVNRAYGGVLSG AVRERI+RAF
Sbjct:    1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAF 95          
BLAST of EY727137 vs. ExPASy Swiss-Prot
Match: RL34A_SCHPO (60S ribosomal protein L34-A OS=Schizosaccharomyces pombe GN=rpl34a PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 9.804e-22
Identity = 51/95 (53.68%), Postives = 68/95 (71.58%), Query Frame = 2
Query:   29 MVQRLTYRTRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 313
            M QR+TYR R +Y T+SN+ R++KTPG  + Y   KK  + P+C  TG  +QGIP LRP E+  +RLS N++TV RAYGG LS  AV++RI+RAF
Sbjct:    1 MAQRVTYRRRLAYNTRSNRTRIIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRPREF--ARLSHNKKTVQRAYGGCLSANAVKDRIVRAF 93          
BLAST of EY727137 vs. ExPASy Swiss-Prot
Match: RL34_DICDI (60S ribosomal protein L34 OS=Dictyostelium discoideum GN=rpl34 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.355e-21
Identity = 53/95 (55.79%), Postives = 63/95 (66.32%), Query Frame = 2
Query:   29 MVQRLTYRTRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 313
            MVQRLTYR R SY T SN  ++VKTPGG+LVYQ   K    P+C   G  + GIP LRP +YK   L ++RRTV+RAYGG      VR RI+RAF
Sbjct:    1 MVQRLTYRRRLSYRTTSNATKIVKTPGGRLVYQYIGKTGKVPRCGECGVNLAGIPALRPYQYK--NLPKSRRTVSRAYGGSKCAKCVRNRIVRAF 93          
BLAST of EY727137 vs. ExPASy Swiss-Prot
Match: RL34B_SCHPO (60S ribosomal protein L34-B OS=Schizosaccharomyces pombe GN=rpl34b PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.355e-21
Identity = 50/95 (52.63%), Postives = 67/95 (70.53%), Query Frame = 2
Query:   29 MVQRLTYRTRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 313
            M QR+TYR R +Y T+SN+ R++KTPG  + Y   KK  + P+C  TG  +QGIP LRP E+  +RLS N++ V RAYGG LS  AV++RI+RAF
Sbjct:    1 MAQRVTYRRRLAYNTRSNKTRIIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRPREF--ARLSHNQKKVQRAYGGCLSANAVKDRIVRAF 93          
BLAST of EY727137 vs. ExPASy Swiss-Prot
Match: RL34_AEDTR (60S ribosomal protein L34 OS=Aedes triseriatus GN=RpL34 PE=2 SV=3)

HSP 1 Score: 96.2857 bits (238), Expect = 1.199e-19
Identity = 52/95 (54.74%), Postives = 65/95 (68.42%), Query Frame = 2
Query:   29 MVQRLTYRTRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 313
            MVQRLT R R SY TKSN+ RVV+TPGG+LVY   KK+ + PKC    +++ GI   RP+E  R R+ R  +TV R +GGVL    +RERIIRAF
Sbjct:    1 MVQRLTLRRRLSYNTKSNKRRVVRTPGGRLVYLYVKKQRTVPKCGQCKEKLSGIKPSRPSE--RPRMCRRLKTVTRTFGGVLCHRCLRERIIRAF 93          
BLAST of EY727137 vs. ExPASy Swiss-Prot
Match: RL34_AEDAL (60S ribosomal protein L34 OS=Aedes albopictus GN=RpL34 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.199e-19
Identity = 52/95 (54.74%), Postives = 65/95 (68.42%), Query Frame = 2
Query:   29 MVQRLTYRTRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 313
            MVQRLT R R SY TKSN+ RVV+TPGG+LVY   KK+ + PKC    +++ GI   RP+E  R R+ R  +TV R +GGVL    +RERIIRAF
Sbjct:    1 MVQRLTLRRRLSYNTKSNKRRVVRTPGGRLVYLYVKKQRTVPKCGQCKEKLSGIKPSRPSE--RPRMCRRLKTVTRTFGGVLCHRCLRERIIRAF 93          
The following BLAST results are available for this feature:
BLAST of EY727137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
RL34_PEA1.774e-4796.8460S ribosomal protein L34 OS=Pisum sativum GN=RPL3... [more]
RL34_TOBAC5.163e-4795.7960S ribosomal protein L34 OS=Nicotiana tabacum GN=... [more]
RL341_ARATH1.962e-4693.6860S ribosomal protein L34-1 OS=Arabidopsis thalian... [more]
RL342_ARATH7.455e-4692.6360S ribosomal protein L34-2 OS=Arabidopsis thalian... [more]
RL343_ARATH2.398e-4489.4760S ribosomal protein L34-3 OS=Arabidopsis thalian... [more]
RL34A_SCHPO9.804e-2253.6860S ribosomal protein L34-A OS=Schizosaccharomyces... [more]
RL34_DICDI6.355e-2155.7960S ribosomal protein L34 OS=Dictyostelium discoid... [more]
RL34B_SCHPO6.355e-2152.6360S ribosomal protein L34-B OS=Schizosaccharomyces... [more]
RL34_AEDTR1.199e-1954.7460S ribosomal protein L34 OS=Aedes triseriatus GN=... [more]
RL34_AEDAL1.199e-1954.7460S ribosomal protein L34 OS=Aedes albopictus GN=R... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-099-D07-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727137 ID=EY727137; Name=EY727137; organism=Citrus sinensis; type=EST; length=587bp
CCACGCGTCCGCTCGAAAGCGAGCGAAAATGGTTCAACGTCTCACATACC
GCACGCGCCACAGCTATGCCACCAAGTCCAACCAGCACCGCGTCGTCAAA
ACCCCCGGGGGGAAGCTGGTTTACCAGAGCACCAAGAAGAGAGCAAGTGG
GCCTAAGTGTCCTGTCACTGGAAAAAGGATCCAAGGAATTCCTCACTTGA
GACCTGCTGAGTACAAGAGGTCTAGACTATCTCGAAATAGGAGGACTGTC
AACCGTGCCTATGGGGGTGTATTATCTGGAGGTGCTGTCAGGGAGAGGAT
TATCCGGGCCTTTTTGGTGGAGGAGCAGAAGATTGTCAAGAAAGTGCTGA
AGATTCAGAAGGCCAAAGAAAAGCTGGCATCTAAGAGTTAAATTGAGACA
GCAGCTTTTGTTTTGCAGTTTTAATTTTCTTATGAAATTTTGACTTGTAT
GAATTATTTACAATGGCATTTTGTGCCGTTCTATTTAAACGTGAATGAGC
ATTTGGTTTTTGCTTGGAAAANNACGCACAAACAAAAAAGTACCGCAGGA
GCAGCCCGAGAATCACTAAGACCAGGAACAAAAGGGG
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