EY753685

Overview
NameEY753685
Unique NameEY753685
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY753685 vs. ExPASy Swiss-Prot
Match: BH047_ARATH (Transcription factor bHLH47 OS=Arabidopsis thaliana GN=BHLH47 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.643e-25
Identity = 63/125 (50.40%), Postives = 82/125 (65.60%), Query Frame = 2 
Query:  203 DASVDGHCPTKKNKSRVPKRVHKAEREKLKREHLNDLFLDLANAGEVNQPNNGKACVLNEAARLLKDLFSQIESLNKENASVLAESHYVTXXXXXXXXXXXXXXXQIEGLATELLARGVPSKPDL 577
            +A+ D  C     K +VPKR++KA RE+LKREHLN+LF++LA+  E+NQ N+GKA +L EA R LKD+F QIESL KE+AS+L+ES YVT               +I  L  E+ AR   SKPDL
Sbjct:   14 NATADERC----RKGKVPKRINKAVRERLKREHLNELFIELADTLELNQQNSGKASILCEATRFLKDVFGQIESLRKEHASLLSESSYVTTEKNELKEETSVLETEISKLQNEIEARANQSKPDL 134
The following BLAST results are available for this feature:
BLAST of EY753685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BH047_ARATH3.643e-2550.40Transcription factor bHLH47 OS=Arabidopsis thalian... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-005-G02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753685 ID=EY753685; Name=EY753685; organism=Citrus sinensis; type=EST; length=836bp
ATTAATTTTTTCAAATTCAAGCTTCGATAACTCCTGCTCTTATAAGGTTG
TTTTTTTTTTTTTCTAAAAAAAAAAAATCAACTTTCATTTTAGCGTTACC
CGAGGATTTTGCACAGGGATTCAAATCTCAAACTCATTTGAGACAGGCAT
GGGTTCTGAGTCTTCTGCTTCCTTGGATGAATAGGTCAACGGCATGGTGG
TGGATGCATCAGTAGATGGGCATTGTCCGACCAAAAAGAATAAGAGCAGA
GTTCCTAAACGAGTTCACAAGGCTGAGAGGGAGAAACTGAAGCGCGAGCA
TTTGAATGATCTCTTTCTTGATCTTGCCAATGCTGGTGAAGTGAATCAGC
CAAACAATGGAAAGGCCTGTGTGTTGAATGAAGCAGCTAGACTATTGAAG
GACTTGTTTAGCCAGATTGAGTCACTAAATAAGGAGAATGCATCTGTCTT
GGCTGAATCTCACTACGTCACGCTTGAGAAGAATGAATTGAAGGAGGAAA
ATTCTTCTCTTGAATCTCAAATTGAAGGTCTGGCAACCGAACTACTGGCC
AGGGGGGTACCATCTAAACCTGACTTGATTTACCCGCTGAAATTTCCCAC
CCAGAATTGTCTAACATTTCCCGCGGAATCACTTGGTTTTCCTGCCGGCG
CCAACCCCCCTTTTTTCCACCCCTTCTGGCCTTGTCTCCCCATCATTTCT
GGCCTTCAACTTTTTCAGCTCGGTGTGTGGTCACTTACATTTAAACCCGC
CGCAACTGCAGCTGTCCGGGTGGGGAGGTTCCCATCGCGCACATCCGGGC
GCTCCTCCATTTTCGGGCGACCGGTTTTCTCCCCGG
back to top