EY753660

Overview
NameEY753660
Unique NameEY753660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8225 contig Csv1_Contig8225:919..1450. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: IDH5_ARATH (Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial OS=Arabidopsis thaliana GN=IDH5 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.132e-43
Identity = 83/101 (82.18%), Postives = 96/101 (95.05%), Query Frame = 3
Query:   15 LCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 317
            LCAGL+GGLGLTPSCNIGE G+ALAEAVHGSAPDIAGKNLANPTALLLS V MLRHL+ +++A++I +AI++TIAEGKYRTADLGGSSTT++FTKAICDHL
Sbjct:  274 LCAGLVGGLGLTPSCNIGEDGVALAEAVHGSAPDIAGKNLANPTALLLSGVMMLRHLKFNEQAEQIHSAIINTIAEGKYRTADLGGSSTTTEFTKAICDHL 374          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: IDH6_ARATH (Isocitrate dehydrogenase [NAD] catalytic subunit 6, mitochondrial OS=Arabidopsis thaliana GN=IDH6 PE=1 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 3.079e-42
Identity = 84/101 (83.17%), Postives = 94/101 (93.07%), Query Frame = 3
Query:   15 LCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 317
            LCAGL+GGLGLTPS NIGE GIALAEAVHGSAPDIAG NLANPTALLLS V MLRHL+L+ +A++I +AI++TIAEGKYRTADLGGSSTT+DFTKAICDHL
Sbjct:  274 LCAGLVGGLGLTPSMNIGEDGIALAEAVHGSAPDIAGMNLANPTALLLSGVMMLRHLKLNKQAEQIHSAIINTIAEGKYRTADLGGSSTTTDFTKAICDHL 374          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_SOLTU (3-isopropylmalate dehydrogenase, chloroplastic OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.792e-35
Identity = 74/78 (94.87%), Postives = 76/78 (97.44%), Query Frame = 3
Query:   15 LCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGK 248
            LCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSV+MLRHLELHDKADRIQ+AIL TIA GK
Sbjct:  267 LCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVSMLRHLELHDKADRIQDAILKTIAGGK 344          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: IDH3A_BOVIN (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Bos taurus GN=IDH3A PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.704e-30
Identity = 64/98 (65.31%), Postives = 79/98 (80.61%), Query Frame = 3
Query:   15 LCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 308
            LCAGLIGGLG+TPS NIG  G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A +I+ A  +TI +GK  T DLGG+S  SDFT+ IC
Sbjct:  262 LCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAAKIETACFATIKDGKSLTKDLGGNSKCSDFTEEIC 359          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: IDHA_DICDI (Isocitrate dehydrogenase [NAD] regulatory subunit A, mitochondrial OS=Dictyostelium discoideum GN=idhA PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.531e-30
Identity = 64/94 (68.09%), Postives = 78/94 (82.98%), Query Frame = 3
Query:   15 LCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFT 296
            LCAGLIGGLGLTPS NIGE G A+ EAVHG+APDIAGKN ANPTAL+LSS+ MLRHL    +A  I+NA+L+T+ EGK +T DLGG+S+ S++T
Sbjct:  248 LCAGLIGGLGLTPSGNIGENGSAIFEAVHGTAPDIAGKNKANPTALILSSIMMLRHLGHFHEASIIENAVLNTLTEGKVKTGDLGGNSSCSEYT 341          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: IDH3A_PONAB (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Pongo abelii GN=IDH3A PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 4.612e-30
Identity = 64/98 (65.31%), Postives = 79/98 (80.61%), Query Frame = 3
Query:   15 LCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 308
            LCAGLIGGLG+TPS NIG  G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A RI+ A  +TI +GK  T DLGG++  SDFT+ IC
Sbjct:  262 LCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEIC 359          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: IDH3A_MACFA (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (Fragment) OS=Macaca fascicularis GN=IDH3A PE=2 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 4.612e-30
Identity = 64/98 (65.31%), Postives = 79/98 (80.61%), Query Frame = 3
Query:   15 LCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 308
            LCAGLIGGLG+TPS NIG  G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A RI+ A  +TI +GK  T DLGG++  SDFT+ IC
Sbjct:  243 LCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEIC 340          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: IDH3A_HUMAN (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Homo sapiens GN=IDH3A PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 4.612e-30
Identity = 64/98 (65.31%), Postives = 79/98 (80.61%), Query Frame = 3
Query:   15 LCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 308
            LCAGLIGGLG+TPS NIG  G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A RI+ A  +TI +GK  T DLGG++  SDFT+ IC
Sbjct:  262 LCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEIC 359          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: IDH3A_DROME (Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Drosophila melanogaster GN=l(1)G0156 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 7.867e-30
Identity = 66/101 (65.35%), Postives = 79/101 (78.22%), Query Frame = 3
Query:   15 LCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 317
            +CAGL+GGLGLTPS N+G  G AL E+VHG+APDIAGK+LANPTALLLS+V MLRH+EL+  AD+I+ A   TI EGKY T DLGG +  S+FT  IC  L
Sbjct:  278 MCAGLVGGLGLTPSGNMGLNG-ALFESVHGTAPDIAGKDLANPTALLLSAVMMLRHMELNTYADKIERAAFETIKEGKYLTGDLGGRAKCSEFTNEICAKL 377          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: IDH3A_MOUSE (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Mus musculus GN=Idh3a PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.027e-29
Identity = 63/98 (64.29%), Postives = 79/98 (80.61%), Query Frame = 3
Query:   15 LCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 308
            LCAGLIGGLG+TPS NIG  G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A +I+ A  +TI +GK  T DLGG++  SDFT+ IC
Sbjct:  262 LCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAAKIEAACFATIKDGKSLTKDLGGNAKCSDFTEEIC 359          
The following BLAST results are available for this feature:
BLAST of EY753660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 234
Match NameE-valueIdentityDescription
IDH5_ARATH2.132e-4382.18Isocitrate dehydrogenase [NAD] catalytic subunit 5... [more]
IDH6_ARATH3.079e-4283.17Isocitrate dehydrogenase [NAD] catalytic subunit 6... [more]
LEU3_SOLTU2.792e-3594.873-isopropylmalate dehydrogenase, chloroplastic OS=... [more]
IDH3A_BOVIN2.704e-3065.31Isocitrate dehydrogenase [NAD] subunit alpha, mito... [more]
IDHA_DICDI3.531e-3068.09Isocitrate dehydrogenase [NAD] regulatory subunit ... [more]
IDH3A_PONAB4.612e-3065.31Isocitrate dehydrogenase [NAD] subunit alpha, mito... [more]
IDH3A_MACFA4.612e-3065.31Isocitrate dehydrogenase [NAD] subunit alpha, mito... [more]
IDH3A_HUMAN4.612e-3065.31Isocitrate dehydrogenase [NAD] subunit alpha, mito... [more]
IDH3A_DROME7.867e-3065.35Probable isocitrate dehydrogenase [NAD] subunit al... [more]
IDH3A_MOUSE1.027e-2964.29Isocitrate dehydrogenase [NAD] subunit alpha, mito... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-005-D12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753660 ID=EY753660; Name=EY753660; organism=Citrus sinensis; type=EST; length=532bp
CATCATTAGTGTACCTATGTGCTGGGTTGATTGGTGGATTGGGCTTAACA
CCTAGTTGCAATATTGGGGAAGGAGGAATTGCCCTTGCTGAAGCTGTTCA
TGGTTCAGCACCTGATATTGCTGGAAAGAATTTGGCAAATCCAACTGCTT
TGCTGTTGAGTTCGGTAACAATGTTGCGCCATTTGGAGCTCCATGACAAG
GCTGATAGGATCCAAAATGCTATCCTGAGCACAATTGCAGAGGGGAAGTA
TCGAACTGCAGATCTTGGTGGCTCTTCAACGACATCAGATTTCACAAAGG
CAATCTGCGATCATCTTTAAATATTTCTTTCTACATAGAATTTGAATTCA
TGTTCAAGATTTACATTCTACCTTTCTTTTTTTGAGCAATGTCTCAAATT
TGTTTTTTCCCCCCCTTTTTAAAGTGTTTTTCTTTGAGGGGAATGAGACC
CATCACCTTGGTGACTATGTAGAAGTTTTTTTCTGATGAAACTGTTCAGC
CAGAGTGTATATGGCCGTCCTCNNGANAAAAA
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