EY753654

Overview
NameEY753654
Unique NameEY753654
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8132 contig Csv1_Contig8132:191..1080. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY753654 vs. ExPASy Swiss-Prot
Match: QORL_ARATH (Quinone oxidoreductase-like protein At1g23740, chloroplastic OS=Arabidopsis thaliana GN=At1g23740 PE=1 SV=2)

HSP 1 Score: 234.958 bits (598), Expect = 2.300e-72
Identity = 121/188 (64.36%), Postives = 137/188 (72.87%), Query Frame = 1 
Query:   82 TKVGTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTXXXXXXXXXXXXXXXXXKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERTGFSAGKXXXXXXXXXXXXXXXXQLAKQVFGASRV 645
            T   ++P EMKAW+Y +YGGVDVLK +  + VP++KEDQVLIKVVAAALNPVD KRRQGKFKATDSPLPT                 K+ KEGDEVY +++EKALEGPKQFGSLAEYTAVEE+LLA KPKN+DF QAAGLPLAIETA EGL RT FSAGK                QLAK V+GAS+V
Sbjct:   69 TADASIPKEMKAWVYSDYGGVDVLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFKATDSPLPTVPGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGPKQFGSLAEYTAVEEKLLALKPKNIDFAQAAGLPLAIETADEGLVRTEFSAGKSILVLNGAGGVGSLVIQLAKHVYGASKV 256

HSP 2 Score: 59.6918 bits (143), Expect = 2.300e-72
Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 2 
Query:  656 NTRNLEFLKSLGADLAIDYTKDIF*DWQKKFDLXYDAIGQCDRTLKAIK 802
            +T  LE ++SLGADLAIDYTK+   D   K+D+ +DAIG CD+ +K IK
Sbjct:  261 STEKLELVRSLGADLAIDYTKENIEDLPDKYDVVFDAIGMCDKAVKVIK 309
The following BLAST results are available for this feature:
BLAST of EY753654 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
QORL_ARATH2.300e-7264.36Quinone oxidoreductase-like protein At1g23740, chl... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-005-D05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753654 ID=EY753654; Name=EY753654; organism=Citrus sinensis; type=EST; length=888bp
CAAGGCTCATTTTCTTACCTTCCTCTTGGAGTTCAAGCAAGTGCATCACA
AGCTGCAGCATCGTCCACTGAGGCTGAGCCCACTAAAGTGGGAACTGTTC
CAAGCGAGATGAAGGCTTGGCTGTATGGGGAATATGGGGGCGTTGATGTT
TTGAAGTTCGACGAGAAAGTGACAGTGCCTCAAGTGAAGGAGGATCAAGT
GTTGATCAAAGTTGTCGCTGCTGCCCTTAATCCTGTTGATGGGAAGAGAA
GGCAGGGCAAGTTCAAGGCCACTGATTCTCCTCTCCCGACTGTTCCAGGC
TATGATGTTGCTGGTGTAGTGGTAAAGGTTGGCACTCAAGTGAAGGAATT
TAAGGAGGGGGATGAAGTATACGGGGACATAAATGAGAAAGCTTTGGAAG
GGCCCAAACAGTTTGGCTCTTTGGCGGAGTACACTGCGGTTGAAGAGAGG
TTACTGGCCCCAAAACCTAAGAATTTGGACTTTGTTCAGGCTGCTGGCCT
TCCGCTCGCTATCGAGACAGCCTATGAGGGTCTAGAAAGGACTGGTTTCT
CTGCTGGTAAATCTATTCTTGTTTTGAATGGTTCTGGTGGTGTTGGAAGC
TTGGTTATTCAGCTGGCGAAACAAGTATTTGGTGCTTCAAGAGTGCAGCA
ACTTCAATACCAGGAACTTGGAGTTCTTGAAGAGTTTGGGTGCTGATTTG
GCTATTGATTACACCAAAGACATCTTTTGAGATTGGCAGAAAAAATTTGA
CTTANTCTATGATGCTATTGGGCAGTGTGATAGAACACTAAAGGCCATCA
AAAGAGGGGGCCCGGGGGTNCTTTAACTGGGCCTTGTACCCTCCTGGTTT
AAAATTGGTGGCCCTCCACGGGAAATTTTGAAAAACTA
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