EY753645

Overview
NameEY753645
Unique NameEY753645
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753645 vs. ExPASy Swiss-Prot
Match: AFC1_ARATH (Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2)

HSP 1 Score: 290.426 bits (742), Expect = 9.187e-78
Identity = 149/255 (58.43%), Postives = 178/255 (69.80%), Query Frame = 3
Query:  135 METQRIIEFPLYNMDKRPRKRPRLTWDXXXXXXXXXXXXA-----LYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWVDYRNHICIVFEKLGPSLYDFLRQTAIGHFPLILFGSLANN-YGSLYHYA*ITSYHTDLE-HKISFLFR*VCKSPVISFIP-TSKDGPF 875
            +ETQR +EFP   +DKRPRKRPRLTWD                  LY   EF +G +PN+   +MFY  +PR GSPPWRPDDKDGHYVF +G+ LTPRY+ILSKMGEGTFGQV+ECFDN+ KE+VAIK++RSINKYREAAMIEIDVLQRL RHD+GG+RCVQIRNW DYRNHICIVFEKLGPSLYDFLR+ +   FP+ L   L      S+ +   +   HTDL+   I  +     K P   F+   +KDG +
Sbjct:   17 LETQRNVEFPHRIVDKRPRKRPRLTWDAAPPLLPPPPPPTVFQPPLYYGPEFASGLVPNFVYPNMFYNGLPRQGSPPWRPDDKDGHYVFVVGDTLTPRYQILSKMGEGTFGQVLECFDNKNKEVVAIKVIRSINKYREAAMIEIDVLQRLTRHDVGGSRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAYMHDLRLIHTDLKPENILLVSSEYIKIPDYKFLSRPTKDGSY 271          
BLAST of EY753645 vs. ExPASy Swiss-Prot
Match: AFC2_ARATH (Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana GN=AFC2 PE=1 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 4.004e-65
Identity = 120/201 (59.70%), Postives = 146/201 (72.64%), Query Frame = 3
Query:  135 METQRIIEFPLYNMDKRPRKRPRLTWDXXXXXXXXXXXXALYCVQEFGN------GGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWVDYRNHICIVFEKLGPSLYDFLRQTAIGHFPLIL 719
            ME +R+ EFP  +MD+RPRKR RL WD             ++C QE GN       G P+   SS+    + R GSPPWR DDKDGHY+F +G++LTPRY+I SKMGEGTFGQV+EC+D E+KE+VA+KIVR + KYREAAMIEI++LQ+L +HD GG RCVQIRNW DYRNHICIVFEKLG SLYDFLR+     FP+ L
Sbjct:    1 MEMERVHEFPHTHMDRRPRKRARLGWDVLPQATKAQV--GMFCGQEIGNISSFASSGAPSDNSSSLCVKGVARNGSPPWREDDKDGHYIFELGDDLTPRYKIYSKMGEGTFGQVLECWDRERKEMVAVKIVRGVKKYREAAMIEIEMLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDL 199          
BLAST of EY753645 vs. ExPASy Swiss-Prot
Match: AFC3_ARATH (Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana GN=AFC3 PE=2 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 1.131e-51
Identity = 111/214 (51.87%), Postives = 141/214 (65.89%), Query Frame = 3
Query:  171 NMDK-RPRKRPRLTWDXXXXXXXXXXXXALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWVDYRNHICIVFEKLGPSLYDFLRQTAIGHFPLILFGSLANNYG-----SLYHYA*ITSYHTDLE 794
            +MDK R RKRPR+TWD                ++  G+ G               R  SPP R DD+DGHYVF++ +NLTPRY+ILSKMGEGTFG+V+EC+D + KE VAIKI+RSI KYR+AAMIEIDVLQ+L + D G TRCVQ++NW DYRNHICIVFEKLGPSL+DFL++     FPL    +L  ++G     S+ +   +   HTDL+
Sbjct:    8 SMDKERVRKRPRMTWDEAPAEPEAKRAV----IKGHGSDG---------------RILSPPLRDDDRDGHYVFSLRDNLTPRYKILSKMGEGTFGRVLECWDRDTKEYVAIKIIRSIKKYRDAAMIEIDVLQKLVKSDKGRTRCVQMKNWFDYRNHICIVFEKLGPSLFDFLKRNKYSAFPL----ALVRDFGCQLLESVAYMHELQLVHTDLK 198          
BLAST of EY753645 vs. ExPASy Swiss-Prot
Match: DOA_DROME (Serine/threonine-protein kinase Doa OS=Drosophila melanogaster GN=Doa PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 3.101e-25
Identity = 54/119 (45.38%), Postives = 84/119 (70.59%), Query Frame = 3
Query:  360 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-CVQIRNWVDYRNHICIVFEKLGPSLYDFLRQTAIGHFPL 713
            DD DGH ++  G+ L  RY+I++ +GEGTFG+VV+  D E+   +A+KI++++ KYREAA +EI+ L+++A+ D      CV++ +W DY  H+CIVFE LG S++DFLR+     +PL
Sbjct:  461 DDADGHLIYHTGDILHHRYKIMATLGEGTFGRVVKVKDMERDYCMALKIIKNVEKYREAAKLEINALEKIAQKDPHCDHLCVKMIDWFDYHGHMCIVFEMLGLSVFDFLRENNYEPYPL 579          
BLAST of EY753645 vs. ExPASy Swiss-Prot
Match: CLK1_MOUSE (Dual specificity protein kinase CLK1 OS=Mus musculus GN=Clk1 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.426e-24
Identity = 54/114 (47.37%), Postives = 78/114 (68.42%), Query Frame = 3
Query:  360 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT-RCVQIRNWVDYRNHICIVFEKLGPSLYDFLRQTA 695
            DD++GH +   G+ L+ RY I+  +GEG FG+VVEC D++     VA+KIV+++++Y EAA  EI VL+ L   D   T RCVQ+  W ++R HICIVFE LG S YDF+++ +
Sbjct:  142 DDEEGHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKVGGRRVAVKIVKNVDRYCEAAQSEIQVLEHLNTTDPHSTFRCVQMLEWFEHRGHICIVFELLGLSTYDFIKENS 255          

HSP 2 Score: 25.0238 bits (53), Expect = 2.426e-24
Identity = 16/47 (34.04%), Postives = 26/47 (55.32%), Query Frame = 2
Query:  677 FSPXNSYRSFPIDLVRELGKQLWESVPLCMNYVLSH-*LGAQNILLV 814
            F   NS+  F +D +R++  Q+ +SV    +  L+H  L  +NIL V
Sbjct:  250 FIKENSFLPFRMDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFV 296          
BLAST of EY753645 vs. ExPASy Swiss-Prot
Match: CLK3_RAT (Dual specificity protein kinase CLK3 OS=Rattus norvegicus GN=Clk3 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 3.429e-24
Identity = 54/120 (45.00%), Postives = 81/120 (67.50%), Query Frame = 3
Query:  360 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT-RCVQIRNWVDYRNHICIVFEKLGPSLYDFLRQTAIGHFPL 713
            DDK+GH V  IG+ L  RY I+  +GEGTFG+VVEC D+ + K  VA+KI+R++ KYREAA +EI+VL+++   D      CV + +W ++  H+CI FE LG + ++FL++     +PL
Sbjct:  138 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 257          
BLAST of EY753645 vs. ExPASy Swiss-Prot
Match: CLK3_MOUSE (Dual specificity protein kinase CLK3 OS=Mus musculus GN=Clk3 PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 3.429e-24
Identity = 54/120 (45.00%), Postives = 81/120 (67.50%), Query Frame = 3
Query:  360 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT-RCVQIRNWVDYRNHICIVFEKLGPSLYDFLRQTAIGHFPL 713
            DDK+GH V  IG+ L  RY I+  +GEGTFG+VVEC D+ + K  VA+KI+R++ KYREAA +EI+VL+++   D      CV + +W ++  H+CI FE LG + ++FL++     +PL
Sbjct:  286 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 405          
BLAST of EY753645 vs. ExPASy Swiss-Prot
Match: CLK3_HUMAN (Dual specificity protein kinase CLK3 OS=Homo sapiens GN=CLK3 PE=1 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 3.429e-24
Identity = 54/120 (45.00%), Postives = 81/120 (67.50%), Query Frame = 3
Query:  360 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT-RCVQIRNWVDYRNHICIVFEKLGPSLYDFLRQTAIGHFPL 713
            DDK+GH V  IG+ L  RY I+  +GEGTFG+VVEC D+ + K  VA+KI+R++ KYREAA +EI+VL+++   D      CV + +W ++  H+CI FE LG + ++FL++     +PL
Sbjct:  286 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 405          
BLAST of EY753645 vs. ExPASy Swiss-Prot
Match: CLK3_BOVIN (Dual specificity protein kinase CLK3 OS=Bos taurus GN=CLK3 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.429e-24
Identity = 54/120 (45.00%), Postives = 81/120 (67.50%), Query Frame = 3
Query:  360 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT-RCVQIRNWVDYRNHICIVFEKLGPSLYDFLRQTAIGHFPL 713
            DDK+GH V  IG+ L  RY I+  +GEGTFG+VVEC D+ + K  VA+KI+R++ KYREAA +EI+VL+++   D      CV + +W ++  H+CI FE LG + ++FL++     +PL
Sbjct:  138 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 257          
BLAST of EY753645 vs. ExPASy Swiss-Prot
Match: LKH1_SCHPO (Dual specificity protein kinase lkh1 OS=Schizosaccharomyces pombe GN=lkh1 PE=1 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 1.303e-23
Identity = 60/155 (38.71%), Postives = 87/155 (56.13%), Query Frame = 3
Query:  336 TGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD-IGGTRCVQIRNWVDYRNHICIVFEKLGPSLYDFLRQTAIGHFPLILFGSLANN-YGSLYHYA*ITSYHTDLE 794
            T   P   DD DGHY          RY ++  +G GTFG+V++C+D       AIK+ R+I KYREA++IE+ VLQ +A  D     +C+Q+R++ DYR HICIV +  G S++DFL+      FPL     L+   + S+     +   HTDL+
Sbjct:  336 TAFDPSTFDDDDGHYKVVPNSKFANRYTVVRLLGHGTFGKVIQCYDQSTGRHCAIKVTRAIPKYREASLIELRVLQTIAHSDPTNENKCIQLRDYFDYRKHICIVTDLFGWSVFDFLKNNNYIPFPLKHIQMLSQQLFKSVAFLHSLGLVHTDLK 490          
The following BLAST results are available for this feature:
BLAST of EY753645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
AFC1_ARATH9.187e-7858.43Serine/threonine-protein kinase AFC1 OS=Arabidopsi... [more]
AFC2_ARATH4.004e-6559.70Serine/threonine-protein kinase AFC2 OS=Arabidopsi... [more]
AFC3_ARATH1.131e-5151.87Serine/threonine-protein kinase AFC3 OS=Arabidopsi... [more]
DOA_DROME3.101e-2545.38Serine/threonine-protein kinase Doa OS=Drosophila ... [more]
CLK1_MOUSE2.426e-2447.37Dual specificity protein kinase CLK1 OS=Mus muscul... [more]
CLK3_RAT3.429e-2445.00Dual specificity protein kinase CLK3 OS=Rattus nor... [more]
CLK3_MOUSE3.429e-2445.00Dual specificity protein kinase CLK3 OS=Mus muscul... [more]
CLK3_HUMAN3.429e-2445.00Dual specificity protein kinase CLK3 OS=Homo sapie... [more]
CLK3_BOVIN3.429e-2445.00Dual specificity protein kinase CLK3 OS=Bos taurus... [more]
LKH1_SCHPO1.303e-2338.71Dual specificity protein kinase lkh1 OS=Schizosacc... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-005-C04-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753645 ID=EY753645; Name=EY753645; organism=Citrus sinensis; type=EST; length=898bp
AACACTGAATTCATTTCTTCAAAATTTCCTTAATTCCTTTGCTCTCAATT
TTTTTTAAAGCATTATGATTCAAATTGAGCTTAATCCATGGCTCTGCTAG
ATTTTTTGAATTGAAAATTTAAACAATAAAAGAAATGGAAACGCAGAGAA
TTATAGAATTTCCGCTTTATAACATGGACAAGCGTCCCAGAAAACGACCC
CGTTTAACGTGGGACGTGCCGCCTCCTCTTCCTCCTCCCAAGGTTCTTCC
GGCTCTGTATTGTGTTCAGGAGTTTGGGAATGGAGGAATGCCCAATTATG
CCTGTTCATCCATGTTTTATGGTGCGATTCCTCGCACTGGATCACCTCCT
TGGAGACCTGATGATAAAGACGGACATTATGTTTTTGCCATCGGAGAAAA
TTTAACTCCTCGCTACAGGATTCTCAGCAAAATGGGTGAAGGGACATTTG
GGCAAGTCGTGGAATGTTTTGACAATGAGAAGAAGGAACTTGTGGCAATC
AAAATTGTTCGCTCTATAAACAAGTATCGTGAAGCAGCCATGATCGAAAT
TGATGTTCTACAGAGGCTTGCCAGGCATGACATTGGTGGCACCCGTTGTG
TGCAAATACGGAATTGGGTTGACTATCGNAATCATATTTGTATTGTATTT
GAGAAACTTGGACCAAGCTTATACGATTTTCTCCGNCAAACAGCTATCGG
TCATTTCCCATTGATCTTGTTCGGGAGCTTGGCAAACAACTATGGGAGTC
TGTACCATTATGCATGAATTACGTCTTATCACACTGACTTGGAGCACAAA
ATATCCTTCTTGTTCCGCTGAGTTTGTAAAAGCCCTGTTATAAGTTTTAT
CCCGACGTCAAAGGATGGTCCTTTTAAGATCTCCCAATAAAGGCATTA
back to top