EY753533

Overview
NameEY753533
Unique NameEY753533
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753533 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1)

HSP 1 Score: 371.318 bits (952), Expect = 4.050e-102
Identity = 190/255 (74.51%), Postives = 206/255 (80.78%), Query Frame = 3
Query:   27 MAASEEVNLNDSKMVVPLHTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGVFSFDVIVDRGTNLLCRIYRPTNGEEHRPNIAELXXXXXXXXXXXXXXXXHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQS-KDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQDRTESEKRLXGKXXCTXPDRDWYWRPIFLKE 788
            MA SEEVNL +SK VVPL+TWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPV+GVFSFDVI+DR TNLL R+YRP +     P+I +L                HGGSFAHSSANSAIYD LCRRLVG C AVVVSVNYRRAPENRYPCAYDDGW VLKW  S SWL+S KDSK  I+LAGDSSGGNIVH+VA+RAVES +++LGNILLNPMFGG +RTESEKRL GK   T  DRDWYWR  FL E
Sbjct:    1 MAGSEEVNLIESKTVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVNGVFSFDVIIDRQTNLLSRVYRPADAGT-SPSITDL-QNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNSSSWLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVESRIDVLGNILLNPMFGGTERTESEKRLDGKYFVTVRDRDWYWR-AFLPE 252          
BLAST of EY753533 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1)

HSP 1 Score: 358.607 bits (919), Expect = 2.717e-98
Identity = 178/255 (69.80%), Postives = 199/255 (78.04%), Query Frame = 3
Query:   27 MAASEEVNLNDSKMVVPLHTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGVFSFDVIVDRGTNLLCRIYRPTNGEEHRPNIAELXXXXXXXXXXXXXXXXHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQS-KDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQDRTESEKRLXGKXXCTXPDRDWYWRPIFLKE 788
            MAAS+EVNL +S+ VVPL+TWVLISNFK+AYN+LRRPDGTFNRHLAE+LDRKV ANANPVDGVFSFDV++DR  NLL R+YRP   ++ +P                     HGGSFAHSSANSAIYD LCRRLVG CK VVVSVNYRRAPEN YPCAYDDGW  L W  SRSWL+S KDSK HI+LAGDSSGGNI H+VALRA ES +++LGNILLNPMFGG +RTESEK L GK   T  DRDWYW+  FL E
Sbjct:    1 MAASDEVNLIESRTVVPLNTWVLISNFKVAYNILRRPDGTFNRHLAEYLDRKVTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWK-AFLPE 254          
BLAST of EY753533 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 1.652e-87
Identity = 163/250 (65.20%), Postives = 185/250 (74.00%), Query Frame = 3
Query:   27 MAASEEVNLNDSKMVVPLHTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGVFSFDVIVDRGTNLLCRIYRPTNG-EEHRPNIAELXXXXXXXXXXXXXXXXHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQS-KDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQDRTESEKRLXGKXXCTXPDRDWYWR 770
            MA   EVNLN+ K +VPL+TWVLISNFKLAY +LRRPDG+FNR LAEFLDRKVPAN+ P+DGVFSFD  VD  TNLL RIY+P +   + R    EL                HGGSF HSSANSAIYD  CRRLV  C  VVVSV+YRR+PE+RYPCAYDDGW  L W KSR WLQS KDS  ++YLAGDSSGGNI H+VA+RA    V++LGNILL+PMFGGQ+RT+SEK L GK   T  DRDWYWR
Sbjct:    1 MAGGNEVNLNECKRIVPLNTWVLISNFKLAYKVLRRPDGSFNRDLAEFLDRKVPANSFPLDGVFSFDH-VDSTTNLLTRIYQPASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRVWLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATNEGVKVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYWR 249          
BLAST of EY753533 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.956e-80
Identity = 153/257 (59.53%), Postives = 182/257 (70.82%), Query Frame = 3
Query:   27 MAASEEVNLNDSKMVVPLHTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGVFSFDVIVDRGTNLLCRIYRPT---NGEE-----HRPNIAELXXXXXXXXXXXXXXXXHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQS-KDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQDRTESEKRLXGKXXCTXPDRDWYWR 770
            MA S+EVN N+ K VVPLHTWVLISNFKL+YN+LRR DGTF R L E+LDR+VPANA P++GV SFD I+D+   L  RIYR     + EE      RP I E                 HGGSF HSSA+S IYD LCRR V   K VVVSVNYRRAPE+RYPCAYDDGWT LKW  S+ +++S  D++A ++L+GDSSGGNI HHVA+RA +  V++ GNILLN MFGG +RTESE+RL GK   T  DRDWYW+
Sbjct:    1 MAGSDEVNRNECKTVVPLHTWVLISNFKLSYNILRRADGTFERDLGEYLDRRVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRP-ILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADEGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWK 256          
The following BLAST results are available for this feature:
BLAST of EY753533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
GI1L3_ARATH4.050e-10274.51Probable gibberellin receptor GID1L3 OS=Arabidopsi... [more]
GI1L1_ARATH2.717e-9869.80Probable gibberellin receptor GID1L1 OS=Arabidopsi... [more]
GI1L2_ARATH1.652e-8765.20Probable gibberellin receptor GID1L2 OS=Arabidopsi... [more]
GID1_ORYSJ1.956e-8059.53Gibberellin receptor GID1 OS=Oryza sativa subsp. j... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-H12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753533 ID=EY753533; Name=EY753533; organism=Citrus sinensis; type=EST; length=890bp
TTTTGTTTTTTGGAGAACTAGTTCTGATGGCTGCAAGTGAAGAAGTGAAC
CTCAATGATTCCAAGATGGTGGTTCCATTGCATACATGGGTTCTTATCTC
TAATTTTAAGTTGGCTTACAATCTTCTTCGTCGTCCTGATGGCACTTTCA
ATCGCCACTTGGCAGAGTTCCTTGACCGGAAAGTCCCAGCAAATGCAAAT
CCTGTTGATGGTGTCTTTTCCTTTGATGTCATTGTTGACCGTGGCACCAA
CCTACTTTGCAGGATTTATCGACCTACAAATGGGGAAGAGCATCGGCCAA
ATATTGCCGAGCTGGAGAAGCCTGTGAGCTCTGAGGTTGTTGTGCCAGTA
ATAATTTTCTTCCATGGAGGAAGCTTTGCACACTCCTCGGCAAATAGTGC
CATATATGATATCTTATGTCGCAGACTCGTCGGGACTTGTAAGGCTGTTG
TGGTCTCTGTGAATTATAGGCGTGCACCTGAAAATCGATATCCTTGTGCT
TATGATGATGGATGGACAGTTCTAAAGTGGGCTAAATCGAGATCATGGCT
TCAAAGTAAGGACTCTAAAGCTCATATCTACTTGGCTGGGGATAGCTCTG
GTGGCAACATAGTACACCATGTTGCTTTAAGAGCAGTAGAATCAGAAGTC
GAAATATTGGGGAATATACTGCTCAATCCAATGTTTGGTGGGCAGGACCG
TACTGAATCTGAGAAGAGATTANATGGGAAATANNTTTGTACTGNTCCAG
ATCGGGACTGGTATTGGAGACCTATCTTCCTGAAGGAGCAATAGGGATCA
TCCGGCATGTATCCATTTGGTCAAAGTATATATCTTGTAGAATGAAATCC
CTAAAGTCTTGTGGGGAACTGGTTGGATCTATTAGGACTG
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