GE213175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GE213175 vs. ExPASy Swiss-Prot
Match: HD1_BRANA (Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1) HSP 1 Score: 328.561 bits (841), Expect = 2.176e-89 Identity = 159/188 (84.57%), Postives = 171/188 (90.96%), Query Frame = 3 Query: 24 TFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASD---SHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 578 +FKEQLQQHVRVHAVEAVM CREIEN L +LTG +LGEG+GATMS+DEDDL MDFS D S D HD+ GFGPLLPTE+ERSLMERVRQELK+ELKQGFKSRIEDVREEI+RKRRAGKLPGDTT+VLK WWQQH KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWH+NS S+TSLKSKRK Sbjct: 106 SFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSEDEDDLQMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSHSLTSLKSKRK 293
BLAST of GE213175 vs. ExPASy Swiss-Prot
Match: KNAT7_ARATH (Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7 PE=1 SV=1) HSP 1 Score: 327.791 bits (839), Expect = 3.712e-89 Identity = 159/188 (84.57%), Postives = 171/188 (90.96%), Query Frame = 3 Query: 24 TFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASD---SHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 578 +FKEQLQQHVRVHAVEAVM CREIEN L +LTG +LGEG+GATMS+DEDDL MDFS D S D HD+ GFGPLLPTE+ERSLMERVRQELK+ELKQGFKSRIEDVREEI+RKRRAGKLPGDTT+VLK WWQQH KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWH+NS S+TSLKSKRK Sbjct: 103 SFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSHSLTSLKSKRK 290
BLAST of GE213175 vs. ExPASy Swiss-Prot
Match: KNOS3_ORYSJ (Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica GN=HOS66 PE=2 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 1.046e-83 Identity = 154/188 (81.91%), Postives = 170/188 (90.43%), Query Frame = 3 Query: 24 TFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLH--MDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR 581 +F+EQLQQHVRVHAVEAVM CREIE +LQ LTG +L EGTGATMS+DED+ ++ +D SD HDLMGFGPL+PT++ERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTT++LK WWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWH+NSQ+ T LKSKRKR Sbjct: 129 SFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMSEDEDETAPMLEGPMDMG-SDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSQTST-LKSKRKR 314
BLAST of GE213175 vs. ExPASy Swiss-Prot
Match: KNAP3_MALDO (Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 1.082e-80 Identity = 146/187 (78.07%), Postives = 162/187 (86.63%), Query Frame = 3 Query: 24 TFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR 581 +FKEQLQQHVRVHA+EAVM C EIE +LQ+LTGVS GEGT ATMSDDEDD + D +L + HD MGFGPL+PTE+ERSLMERVRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTTSVLK WWQ HSKWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWHSN + T LKSKRKR Sbjct: 241 SFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTSATMSDDEDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSTVLKSKRKR 427
BLAST of GE213175 vs. ExPASy Swiss-Prot
Match: KNAT3_ARATH (Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3 PE=1 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 7.261e-77 Identity = 143/191 (74.87%), Postives = 161/191 (84.29%), Query Frame = 3 Query: 24 TFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSH------DLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 578 +FKEQLQQHVRVHA+EAVM C EIE +LQ+LTGVS GEG GATMSDDED+ Q SD++ D++GFGPL+PTE+ERSLMERVRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTTSVLK WWQ HSKWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWHSN S T LK+KRK Sbjct: 236 SFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGMGATMSDDEDE--------QVESDANMFDGGLDVLGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTVLKNKRK 418
BLAST of GE213175 vs. ExPASy Swiss-Prot
Match: LET12_SOLLC (Homeobox protein knotted-1-like LET12 OS=Solanum lycopersicum GN=LET12 PE=2 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 3.603e-76 Identity = 139/189 (73.54%), Postives = 159/189 (84.13%), Query Frame = 3 Query: 24 TFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR*R 587 +FKEQLQQHVRVHA+EAVM C E+E +LQ+LTGV+ GEGTGATMSDD+DD D + D D MGFGPL+PTE+ERSLMERVRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTTSVLK WWQ HSKWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWHSN + +S KS+ + R Sbjct: 238 SFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVAPGEGTGATMSDDDDDQADSDTNFLDGGFDGPDSMGFGPLVPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSSSQKSQTQECR 426
BLAST of GE213175 vs. ExPASy Swiss-Prot
Match: KNAT4_ARATH (Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana GN=KNAT4 PE=1 SV=3) HSP 1 Score: 283.493 bits (724), Expect = 8.028e-76 Identity = 141/191 (73.82%), Postives = 160/191 (83.77%), Query Frame = 3 Query: 24 TFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSH------DLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 578 +FKEQLQQHVRVHA+EAVM C EIE +LQ+ TGVS GEGTGATMS+DED+ Q SD+H D +GFGPL+PTE+ERSLMERVRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTTSVLK+WWQ HSKWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWHSN S T K+KR+ Sbjct: 200 SFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGEGTGATMSEDEDE--------QVESDAHLFDGSLDGLGFGPLVPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTVSKNKRR 382
BLAST of GE213175 vs. ExPASy Swiss-Prot
Match: KNOSD_ORYSJ (Homeobox protein knotted-1-like 13 OS=Oryza sativa subsp. japonica GN=OSH45 PE=2 SV=2) HSP 1 Score: 277.33 bits (708), Expect = 5.753e-74 Identity = 137/186 (73.66%), Postives = 156/186 (83.87%), Query Frame = 3 Query: 24 TFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 578 +FKEQLQQHVRVHA+EAVM C E+E LQ+LTG S GEGTGATMSD EDD + ++ + D D MGFG LPTE+ERSLMERVRQELK ELKQG+K ++ D+REEILRKRRAGKLPGDTTS LK WWQ H+KWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWHSN S TS+K+KRK Sbjct: 183 SFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGASPGEGTGATMSDGEDDQADSEANMYDPSLDGADNMGFG--LPTESERSLMERVRQELKHELKQGYKEKLIDIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTSVKTKRK 366
BLAST of GE213175 vs. ExPASy Swiss-Prot
Match: KNOSB_ORYSJ (Homeobox protein knotted-1-like 11 OS=Oryza sativa subsp. japonica GN=HOS59 PE=2 SV=2) HSP 1 Score: 275.404 bits (703), Expect = 2.186e-73 Identity = 136/186 (73.12%), Postives = 154/186 (82.80%), Query Frame = 3 Query: 24 TFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR 581 +FKEQLQQHVRVHA+EAVM C E+E TLQ+LTG S EG+GATMSDDED+ S +D D MGFGPL+ TE ERSL+ERVRQELK ELKQG++ ++ D+REEILRKRRAGKLPGDT S LK WWQ HSKWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWHSN S +S KSKRKR Sbjct: 126 SFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPREGSGATMSDDEDNQVDSESNMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYREKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPASSSSDKSKRKR 311
BLAST of GE213175 vs. ExPASy Swiss-Prot
Match: KNOS2_ORYSJ (Homeobox protein knotted-1-like 2 OS=Oryza sativa subsp. japonica GN=HOS58 PE=2 SV=2) HSP 1 Score: 274.248 bits (700), Expect = 4.870e-73 Identity = 135/186 (72.58%), Postives = 155/186 (83.33%), Query Frame = 3 Query: 24 TFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR 581 +FKEQLQQHVRVHA+EAVMGC E+E +LQ+LTG S GEGTGATMSDDED+ + +D D MGFGPL+ TE ERSL+ERVR ELK ELKQG+K ++ D+REEILRKRRAGKLPGDT S+LK WWQ HSKWPYPTEDDKA+LV+ETGLQLKQINNWFINQRKRNWHSN S + K+K+KR Sbjct: 117 SFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGATMSDDEDNQVDSEANMFDGNDGSDGMGFGPLMLTEGERSLVERVRHELKNELKQGYKEKLVDIREEILRKRRAGKLPGDTASILKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSNPAS-SGEKTKKKR 301 The following BLAST results are available for this feature:
BLAST of GE213175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >GE213175 ID=GE213175; Name=GE213175; organism=Citrus sinensis; type=EST; length=732bpback to top |