EY753415

Overview
NameEY753415
Unique NameEY753415
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13105 contig Csv1_Contig13105:31..889. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753415 vs. ExPASy Swiss-Prot
Match: CREG2_HUMAN (Protein CREG2 OS=Homo sapiens GN=CREG2 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.578e-26
Identity = 60/156 (38.46%), Postives = 92/156 (58.97%), Query Frame = 3
Query:  138 PHPNDAAAFARWLVSQNYWGVLNTISSD--LGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTCGER--DPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEMMDWPEDHNFQIFKLEIEDIFLINWF 593
            P P   AA AR L   + WG L T+S+   + G PFGN +  SDG  N  +G+P+FY+T  DP   + +++  +SL + E     C +   DPE+P C ++TLTG+++ V  S +E EFA+ A+F++HP M  WP  + +   K+ IE I+L  W+
Sbjct:  118 PGPRLRAATARSLAHASVWGCLATVSTHKKIQGLPFGNCLPVSDGPFNNSTGIPFFYMTAKDPVVADLMKNPMASLMLPESEGEFCRKNIVDPEDPRCVQLTLTGQMIAV--SPEEVEFAKQAMFSRHPGMRKWPRQYEWFFMKMRIEHIWLQKWY 271          
BLAST of EY753415 vs. ExPASy Swiss-Prot
Match: CREG1_CHICK (Protein CREG1 OS=Gallus gallus GN=CREG1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.293e-25
Identity = 65/158 (41.14%), Postives = 94/158 (59.49%), Query Frame = 3
Query:  138 PHPNDAAAFARWLVSQNYWGVLNTISSDLG--GAPFGNVVSFSDGLPNEG--SGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTCGER--DPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEMMDWPEDHNFQIFKLEIEDIFLINWF 593
            P P +AA  AR+++    WG L T+S+  G  G PF N+ S SDG P  G  SGVPY YLT ++ + ++   +  +SL +S      C +   DP+NP CA I   G +V V+ S  EA  A+ ALFT+HPEM  WP+DHN+   K  I +I+++++F
Sbjct:   21 PPPEEAARMARFVLHNCDWGALATLSAQEGLRGRPFANIFSISDGAPGPGGGSGVPYLYLTDMEISVQDLEVNSNASLTVSLAQTPYCKKHRYDPQNPLCAHIIFCGSIVKVNDS--EAALAKKALFTRHPEMESWPKDHNWFYAKFNITNIWVLDYF 176          
BLAST of EY753415 vs. ExPASy Swiss-Prot
Match: CREG2_MOUSE (Protein CREG2 OS=Mus musculus GN=Creg2 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.184e-24
Identity = 57/156 (36.54%), Postives = 91/156 (58.33%), Query Frame = 3
Query:  138 PHPNDAAAFARWLVSQNYWGVLNTISSD--LGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTCGER--DPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEMMDWPEDHNFQIFKLEIEDIFLINWF 593
            P P   A  AR L   + WG L T+S+   + G PFG+ ++ SDG  +  +G+P+FY+T  DP   + +++  +SL + E     C +   DPE+P CA++TLTG++V V     E EFA+ A+F++HP M  WP  + +   K+ +E I+L  W+
Sbjct:  116 PGPRVHAGTARSLAHASSWGCLATVSTHEKIQGLPFGSCLAISDGPVHNSTGIPFFYMTAKDPAVADLVKNPTASLVLPESEGEFCRKNIVDPEDPRCARLTLTGRMVTVPPG--EVEFAKQAMFSRHPGMRKWPRQYEWFFMKMWVEHIWLQKWY 269          
BLAST of EY753415 vs. ExPASy Swiss-Prot
Match: CREG1_HUMAN (Protein CREG1 OS=Homo sapiens GN=CREG1 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.431e-24
Identity = 60/156 (38.46%), Postives = 91/156 (58.33%), Query Frame = 3
Query:  138 PHPNDAAAFARWLVSQNYWGVLNTISS--DLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTCGER--DPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEMMDWPEDHNFQIFKLEIEDIFLINWF 593
            P   DAA  AR++   + WG L TIS+   + G PF +V+S SDG P  GSGVPYFYL+ L  +  N   +  ++L ++      C +   DP++P C  I L+G   +  V+  E + A+H+LF +HPEM  WP  HN+   KL I +I+++++F
Sbjct:   50 PPREDAARVARFVTHVSDWGALATISTLEAVRGRPFADVLSLSDGPPGAGSGVPYFYLSPLQLSVSNLQENPYATLTMTLAQTNFCKKHGFDPQSPLCVHIMLSG--TVTKVNETEMDIAKHSLFIRHPEMKTWPSSHNWFFAKLNITNIWVLDYF 203          
BLAST of EY753415 vs. ExPASy Swiss-Prot
Match: CREG1_MOUSE (Protein CREG1 OS=Mus musculus GN=Creg1 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.303e-21
Identity = 56/168 (33.33%), Postives = 91/168 (54.17%), Query Frame = 3
Query:  108 GSLDINNLKKPHP--NDAAAFARWLVSQNYWGVLNTISS--DLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTCGER--DPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEMMDWPEDHNFQIFKLEIEDIFLINWF 593
            G  D++    P P   D    AR++   + WG L TIS+  ++ G PF +++S SDG P EG+G PY YL+ L     +   +  ++L +S      C     DP++P C  I ++G   +  V+  E ++A  +LF +HPEM  WP  HN+   KL+I  I+++++F
Sbjct:   38 GDWDVDRRLPPLPPREDGPRVARFVTHVSDWGSLATISTIKEVRGWPFADIISISDGPPGEGTGEPYMYLSPLQQAVSDLQENPEATLTMSLAQTVYCRNHGFDPQSPLCVHIMMSG--TVTKVNKTEEDYARDSLFVRHPEMKHWPSSHNWFFAKLKISRIWVLDYF 203          
The following BLAST results are available for this feature:
BLAST of EY753415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CREG2_HUMAN7.578e-2638.46Protein CREG2 OS=Homo sapiens GN=CREG2 PE=1 SV=1[more]
CREG1_CHICK1.293e-2541.14Protein CREG1 OS=Gallus gallus GN=CREG1 PE=2 SV=1[more]
CREG2_MOUSE3.184e-2436.54Protein CREG2 OS=Mus musculus GN=Creg2 PE=1 SV=1[more]
CREG1_HUMAN5.431e-2438.46Protein CREG1 OS=Homo sapiens GN=CREG1 PE=1 SV=1[more]
CREG1_MOUSE4.303e-2133.33Protein CREG1 OS=Mus musculus GN=Creg1 PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-002-E05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753415 ID=EY753415; Name=EY753415; organism=Citrus sinensis; type=EST; length=858bp
CAGTAAAATAATAGAAACAAAAACATGAATAACAAAAGCCTGGTTCATTT
TTTACAAGTTTTGTCTTTGGTCTTGTTTTTTGTTGTGGGCACTCAAGATT
CTGTTGAGGGTCGCTTGATATCAACAATCTCAAAAAACCTCACCCAAATG
ATGCTGCTGCTTTTGCTCGTTGGTTGGTCTCTCAGAATTATTGGGGGGTC
TTAAATACGATTTCAAGTGACTTGGGAGGAGCACCATTCGGGAATGTTGT
TTCATTCAGTGATGGACTGCCTAATGAGGGTAGTGGTGTCCCGTACTTCT
ATTTGACAACTCTTGATCCAACTGCAAGGAATGCATTAAGGGACAAGAGG
TCTTCGCTGGCAATTAGTGAGTACCCTCTCGGAACTTGTGGTGAAAGAGA
CCCTGAGAACCCCGCTTGTGCCAAAATTACACTCACTGGAAAGTTGGTGC
TTGTTGATGTAAGTACTAAAGAAGCAGAATTTGCTGAACATGCCCTGTTC
ACAAAGCACCCTGAGATGATGGACTGGCCTGAGGATCACAACTTCCAGAT
CTTCAAATTGGAGATTGAAGATATATTTTTGATTAATTGGTTTTGGTGGG
CGTAAACCTCTCACGGTGGATCAGTACCTACACACGAAAATGAACAAATT
TGCCTTCATTCTTTCAAAATTCATCTGATGTCTCTGCCTCTTACGCGATC
ATGTTGAATGCAAATGCAAACTATGTACGTGTACGATCTGTAAATAAATC
CAATCAATGGTGTATATCACATTGATGTGGGCCATATATGTTTAATATGC
TCCAACGTTGCTCAAGAAACCATCGGAAAATAAATGGTTTTTTTATTAAA
GAATGGTT
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