EY726608

Overview
NameEY726608
Unique NameEY726608
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY726608 vs. ExPASy Swiss-Prot
Match: ARP9_ARATH (Actin-related protein 9 OS=Arabidopsis thaliana GN=ARP9 PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 6.506e-60
Identity = 118/219 (53.88%), Postives = 160/219 (73.06%), Query Frame = 3
Query:  117 DYLKTVVPSQLIAERGSNLVVINPGSANIRIGLAQHDTPLNIPHCIARRTSQVPKRNVVDQMLNSQVTTSQHVERERAYDVIASLMKIPFLDEEVANNSFPRKMGRVDAFNQQNS-RKDVAFSWTNVYEKEPMPSTALESSSSMNHGIIXESVGQHGNTDIKELNFSERKFREVICGEEALRVSPTEPYCIHRPILRGHLNNSPHYPMQQGLEKLYAIM 770
            DYLKTV P+Q+++ERG+NLVVIN GSAN+R+GLA  + P N+P+CIAR  +Q  K  VVDQMLN++VTT+QHV+RERAY+  ASL+KI FLDE  ++ S  RKMGR+D +NQ ++ +KD  F+WT+VYE E + S A  + +S + G    S      TD K+ + S+RK+R++I GEEAL++SP EPYC++ PI RGH N SPHY  Q+  E L AI+
Sbjct:   14 DYLKTVAPTQILSERGANLVVINLGSANVRVGLAMDEKPFNVPNCIARYITQSGKPTVVDQMLNTEVTTNQHVDRERAYNSAASLLKILFLDESSSSGSASRKMGRIDGYNQASTIKKDSVFTWTDVYEDEKI-SLASPAETSPDKGDASASEAVPDVTDSKDTSESKRKYRKMIFGEEALKISPKEPYCLYHPIRRGHFNVSPHYSAQRVCEDLTAIL 231          
BLAST of EY726608 vs. ExPASy Swiss-Prot
Match: ARP9_ORYSI (Actin-related protein 9 OS=Oryza sativa subsp. indica GN=ARP9 PE=2 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 3.022e-57
Identity = 121/248 (48.79%), Postives = 159/248 (64.11%), Query Frame = 3
Query:  114 MDYLKTVVPSQLIAERGSNLVVINPGSANIRIGLAQHDTPLNIPHCIARRTSQ----VPKRNVVDQMLNSQVTTSQHVERERAYDVIASLMKIPFLDEEV--ANNSFPRKMGRVDAFNQQNSRKDVAFSWTNVYEKEPMPSTALESSSSMNHGIIXESVGQHGNTDIKELNFSERKFREVICGEEALRVSPTEPYCIHRPILRGHLNNSPHYPMQQGLEKLYAIMGLDFEKKIGFSPFLKKNLFFAIL 839
            MDYLKTVVPSQL+AERG+NLVVINPGS+N+RIG A  D P NIPHCIAR  +Q     P+ +V D+MLN   T SQ+ ERERAYD+IASL+KIPFLDEE+  AN + P KMGRVDA + Q ++ D  F+WT+V ++    ST +    +    +      Q    D  E N  E  ++E+I GE+AL++ P+E YC+  PI RGH N S  Y + Q LE L  I      +K+  +P   ++L+ AIL
Sbjct:    1 MDYLKTVVPSQLMAERGANLVVINPGSSNVRIGFASQDVPFNIPHCIARHITQRKDDTPRLSVRDKMLNCHATPSQNAERERAYDIIASLLKIPFLDEEMPSANQALPPKMGRVDALSSQQNKDDSKFTWTDVMDRSIKSSTPIVDKDADVDPL------QRSTPDDTEPNSEENMYKEIIFGEDALKIPPSESYCLSHPIRRGHFNISQDYSLHQVLEDLRTIWNWILTEKLHINP-RDRHLYSAIL 241          
BLAST of EY726608 vs. ExPASy Swiss-Prot
Match: ARP9_ORYSJ (Actin-related protein 9 OS=Oryza sativa subsp. japonica GN=ARP9 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.732e-57
Identity = 120/248 (48.39%), Postives = 159/248 (64.11%), Query Frame = 3
Query:  114 MDYLKTVVPSQLIAERGSNLVVINPGSANIRIGLAQHDTPLNIPHCIARRTSQ----VPKRNVVDQMLNSQVTTSQHVERERAYDVIASLMKIPFLDEEV--ANNSFPRKMGRVDAFNQQNSRKDVAFSWTNVYEKEPMPSTALESSSSMNHGIIXESVGQHGNTDIKELNFSERKFREVICGEEALRVSPTEPYCIHRPILRGHLNNSPHYPMQQGLEKLYAIMGLDFEKKIGFSPFLKKNLFFAIL 839
            MDYLKTVVPSQL+AERG+NLVVINPGS+N+RIG A  D P NIPHCIAR  +Q     P+ +V D+MLN   T SQ+ ERERAYD+IASL+KIPFLDE++  AN + P KMGRVDA + Q ++ D  F+WT+V ++    ST +    +    +      Q    D  E N  E  ++E+I GE+AL++ P+E YC+  PI RGH N S  Y + Q LE L  I      +K+  +P   ++L+ AIL
Sbjct:    1 MDYLKTVVPSQLMAERGANLVVINPGSSNVRIGFASQDVPFNIPHCIARHITQQKDDTPRLSVRDKMLNCHATPSQNAERERAYDIIASLLKIPFLDEDMPSANQALPPKMGRVDALSSQQNKDDSKFTWTDVMDRSIKSSTPIVDKDADVDPL------QRSTPDDTEPNSEENMYKEIIFGEDALKIPPSESYCLSHPIRRGHFNISQDYSLHQVLEDLRTIWNWILTEKLHINP-RDRHLYSAIL 241          
The following BLAST results are available for this feature:
BLAST of EY726608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ARP9_ARATH6.506e-6053.88Actin-related protein 9 OS=Arabidopsis thaliana GN... [more]
ARP9_ORYSI3.022e-5748.79Actin-related protein 9 OS=Oryza sativa subsp. ind... [more]
ARP9_ORYSJ6.732e-5748.39Actin-related protein 9 OS=Oryza sativa subsp. jap... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-092-H03-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY726608 ID=EY726608; Name=EY726608; organism=Citrus sinensis; type=EST; length=888bp
GACAGCTGCAGTACGGTCGGAATCCCGGGTCGACCACGCGTCCGGCAAGA
AGTGAAACTGAGGAGAAAGGAGCGGCAAAATCAGTCATCCACTTTCAGTG
ATCTTTCACTGCCATGGATTACTTGAAAACCGTGGTGCCTTCACAACTCA
TCGCCGAACGAGGCTCCAATTTAGTCGTGATCAATCCTGGTTCTGCAAAC
ATCAGAATCGGCCTCGCTCAGCACGACACTCCGTTGAACATTCCTCATTG
CATTGCTCGTCGTACCAGCCAAGTCCCTAAGCGAAATGTCGTAGATCAGA
TGCTTAATTCTCAGGTTACAACAAGTCAGCATGTGGAACGTGAGAGGGCT
TATGATGTTATTGCGTCGCTGATGAAGATTCCGTTTCTTGATGAAGAGGT
TGCAAACAATTCCTTCCCAAGGAAGATGGGCCGTGTTGATGCATTTAATC
AGCAAAATAGCAGGAAGGATGTAGCCTTCAGTTGGACTAATGTATATGAG
AAGGAACCTATGCCATCTACGGCATTAGAAAGTTCATCATCAATGAATCA
TGGTATTATTANAGAGTCAGTGGGCCAGCACGGAAATACTGATATTAAGG
AGCTTAATTTCAGTGAACGTAAGTTCAGAGAAGTCATTTGTGGTGAGGAA
GCTCTAAGAGTGTCACCCACAGAGCCATATTGCATACACCGTCCTATTCT
TAGAGGTCACTTAAATAATTCCCCGCATTATCCCATGCAGCAGGGATTGG
AAAAACTATATGCAATAATGGGACTGGATTTTGAAAAAAAAATTGGATTT
TCCCCGTTTTTGAAAAAAAATTTGTTTTTCGCTATTCTTTGGTTTTGCCA
AAAAATTTTTAAAAAATCAAAAAAAAAAAGGAAAAGGG
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