EY753388

Overview
NameEY753388
Unique NameEY753388
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length902
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY753388 vs. ExPASy Swiss-Prot
Match: Y4115_ARATH (Uncharacterized protein At4g01150, chloroplastic OS=Arabidopsis thaliana GN=At4g01150 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.579e-29
Identity = 79/168 (47.02%), Postives = 101/168 (60.12%), Query Frame = 2 
Query:   41 SMAATACAGVLTPRVPXXXXXXXXXXHCFALPCLXXXXXXXXXXXX-IKQVSES--RRFPLLQVRASSSEETSTVDAHELFSDLKEKWDAIENKSTVLLYGGGAXVAVWLSSTIGGAIHSVXXXXXXXXXXXXXYTGWFVYGSLFFKSSSKDLAPVIRALMNNIAGAD 535
            S+AA++   V+ PRVP           C A+P L             +K VS +  ++  LL+ RASS EETS++D +EL +DLKEKWD +ENKSTVL+YGGGA VAVWLSS + GAI+SV             YTGWFVY  L FKSS K+LA  I +L   IAG++
Sbjct:    4 SVAASSSMAVMVPRVPAVST------RCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELLKTRASS-EETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164
The following BLAST results are available for this feature:
BLAST of EY753388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4115_ARATH3.579e-2947.02Uncharacterized protein At4g01150, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-002-C01-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753388 ID=EY753388; Name=EY753388; organism=Citrus sinensis; type=EST; length=902bp
ATTCACAAGGCTGACCCACGCGTCCGCACAGATTATTGNTTCAATGGCAG
CGACGGCGTGCGCGGGGGTGTTAACTCCACGTGTCCCCTCATCCACCACC
GTCAAAGTCAAATCTTCTCACTGCTTTGCTCTTCCCTGCCTCCCTCCTCG
TTCGTCAACGCCACCATTCTCTTCTTCCATTAAACAAGTTTCAGAGTCGA
GAAGGTTTCCTTTGCTTCAGGTTAGAGCCTCTTCCTCAGAGGAGACATCC
ACAGTTGATGCACATGAACTTTTTTCAGACTTGAAGGAAAAGTGGGATGC
CATTGAAAACAAGTCCACGGTACTTCTCTATGGAGGTGGGGCANTGGTGG
CTGTTTGGTTATCCTCAACTATTGGTGGTGCCATCCATTCAGTGCCTTTG
CTTCCCAATCTCTTGGAGTTGATTGGACTTGGTTATACTGGATGGTTCGT
CTACGGATCCCTCTTCTTCAAGTCAAGCTCAAAAGATCTAGCCCCGGTTA
TTCGCGCACTGATGAATAATATTGCTGGAGCTGACTCGCTTGCACATTCT
GGAGGCAATTCATGTTTGGCCCTGATAGTCATTTATTCTGGTCCTCTATC
ATTGCCCATGAGGCCCTTGCCGCCTGCAGAGTGTGCTGCGTGCGGCTCCC
TTTTATCCCTGACTTTGCGCGTTTTCCCCTGGAATTAGAGAATTCACAAA
GTACTGGGGTGGTCCAACCATGGATTGTTTCTGTGGTTTACCTCCCGAAG
CCGGTTCTTTTTCTCCCTCCCACCCATGCTTCATAAAACCGCTTCACAAC
AAAAAAAAAGGGCGGCTCGTTTTAAGTTGCAGGCTCACAACCCCTGGATT
TCGCCTTATGGTTTCTCATGGGGCACCTAACCAAAAACAAGGCACAAAAA
AA
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