EY726547

Overview
NameEY726547
Unique NameEY726547
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY726547 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.985e-60
Identity = 112/197 (56.85%), Postives = 154/197 (78.17%), Query Frame = 3
Query:    3 FSEVKHLTFSAKTVYSVLHALVPSLETAFVDP---DLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIF 581
            FSEVK+  F  KT+ SVLHA VP+ ++A +D    +L FP F  ID LF +GV LP +++ GF ++++PRL++ + D+ GD ILLF+TP  + +DKF W RDEEF+R+TLAG+NPY+I L+ E+PLKS LDP +YGP ESAIT +L+E+++  +++VEEAI QK+LF+LD+HDLFLPYV K+R LK TT+YGSRTIF
Sbjct:  340 FSEVKNAQFLLKTLQSVLHAAVPAAQSALIDNLSLNLPFPSFFVIDKLFEDGVELPGVEKLGFLHSIVPRLLELLRDSPGDKILLFDTPANVQKDKFAWLRDEEFARETLAGINPYAIELVREFPLKSKLDPAVYGPAESAITADLLEEQMRRVMTVEEAISQKRLFMLDFHDLFLPYVHKIRSLKHTTMYGSRTIF 536          
BLAST of EY726547 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 2.726e-56
Identity = 106/197 (53.81%), Postives = 150/197 (76.14%), Query Frame = 3
Query:    3 FSEVKHLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEG----FWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIF 581
            FS+VK  TFSA T+ S LHA++P++    ++   GF +F AIDAL+++G+ LP     G      N ++PR+V+ IEDT +++L FE PE ++RD+F WFRDEEF+RQTLAGLNP  IR +TE+P+ S LDP +YGP ESA++ E++EK + G ++VEEA+++K+LF+LDYHD+FLPYV +VR+L  TTLYGSRT+F
Sbjct:  299 FSDVKGRTFSATTLRSGLHAILPAV-APLLNNSHGFSHFPAIDALYSDGIPLPVDGHGGNSFNVINDVIPRVVQMIEDTTEHVLRFEVPEMLERDRFSWFRDEEFARQTLAGLNPICIRRLTEFPIVSKLDPAVYGPAESALSKEILEKMMNGRMTVEEAMEKKRLFLLDYHDVFLPYVHRVRELPDTTLYGSRTVF 494          

HSP 2 Score: 24.6386 bits (52), Expect = 2.726e-56
Identity = 14/40 (35.00%), Postives = 20/40 (50.00%), Query Frame = 2
Query:  599 GPLRPIAMELTRASNEWQAPNGNQGFLTSLELYWRGWLWK 718
            G L P+A+ELTR  +  + P   + F    +     WLWK
Sbjct:  500 GTLMPLAIELTRPQSPTK-PQWKRAFTHGSDA-TESWLWK 537          
BLAST of EY726547 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.435e-54
Identity = 102/193 (52.85%), Postives = 139/193 (72.02%), Query Frame = 3
Query:    3 FSEVKHLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIF 581
            FS  K  +F+ K V + L ++ P +E+  + P   FP+F AI  LF EG+ LP  K  G    LLPR++KA+ +  D+IL F+ P  ++RD+F W RD+EF+RQTLAGLNPYSI+L+ EWPL S LDP +YG P S IT E++E+E+ G ++V+EA+K K+LF+LDYHDL LPYV KVR+L +TTLY SRT+F
Sbjct:  303 FSTAKGTSFTGKAVLAALPSIFPQIESVLLSPQEPFPHFKAIQNLFEEGIQLP--KDAGLL-PLLPRIIKALGEAQDDILQFDAPVLINRDRFSWLRDDEFARQTLAGLNPYSIQLVEEWPLISKLDPAVYGDPTSLITWEIVEREVKGNMTVDEALKNKRLFVLDYHDLLLPYVNKVRELNNTTLYASRTLF 492          
BLAST of EY726547 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 1.215e-53
Identity = 105/197 (53.30%), Postives = 143/197 (72.59%), Query Frame = 3
Query:    3 FSEVKHLTFSAKTVYSVLHALVPSLETAFVDP---DLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIF 581
            FS  K   F  KTV SVL A VP+ ++  +D    +L FP F  ID LF +GV LP + +  F  +++PRL++ + DT  + IL FETP  + +DKF W RDEEF+R+TLAG+NPY+I L+ E+PLKS LDP +YGP ESAIT +L+E+++  +++VEEAI QK+LF+LD+HDLFLPYV K+R L  TT+YGSRT+F
Sbjct:  323 FSPEKEDYFLRKTVGSVLQAAVPAAQSLLLDKLKWNLPFPSFFVIDKLFEDGVELPGVDKLNFLESVVPRLLEHLRDTPAEKILRFETPANIQKDKFAWLRDEEFARETLAGINPYAIELVREFPLKSKLDPAVYGPAESAITADLLEEQMRRVMTVEEAISQKRLFMLDFHDLFLPYVHKIRSLDHTTMYGSRTVF 519          
BLAST of EY726547 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.813e-46
Identity = 99/205 (48.29%), Postives = 129/205 (62.93%), Query Frame = 3
Query:    3 FSEVKHLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEG--------FWNTLLPRLVK----AIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIF 581
            F+E K   F  K   S LHAL   L+TA       FP  SAID L+++     P++ EG           T L  L K    A  +    +  FETPE  DRDKF WFRDEEF+RQT+AG+NP SI+L+TE+P+KS LD   YGP +S IT E++E++I  +++ +EA++ KKLF+LDYHDL LPYV KVR+L  TTLYGSR +F
Sbjct:  320 FTERKMGAFDTKKFMSQLHALTTGLKTA-KHKSQSFPSLSAIDQLYDDNFRNQPVQPEGGKLRFVIDLLETELLHLFKLEGAAFLEGIRRVFKFETPEIHDRDKFAWFRDEEFARQTIAGMNPMSIQLVTEFPIKSNLDEATYGPADSLITKEVVEEQIRRVMTADEAVQNKKLFMLDYHDLLLPYVHKVRKLDGTTLYGSRALF 523          

HSP 2 Score: 28.8758 bits (63), Expect = 2.813e-46
Identity = 20/49 (40.82%), Postives = 28/49 (57.14%), Query Frame = 2
Query:  599 GPLRPIAMELTRASNEWQAPNGNQGFLTSLELYWRG-WLWK-ANQNLLA 739
            G LRPIA+ELTR  ++ + P   Q F    +    G WLW+ A  ++LA
Sbjct:  529 GTLRPIAIELTRPKSK-KKPQWRQVFTPGCDGSVTGSWLWQLAKAHILA 576          
BLAST of EY726547 vs. ExPASy Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.666e-42
Identity = 112/284 (39.44%), Postives = 153/284 (53.87%), Query Frame = 3
Query:    3 FSEVKHLTFSAKTVYSVLHALVPSLETAFVDPDL--GFPYFSAIDALFNEGVNLPPLKQEG-----FWNTLLPRLVKAIEDTGDN-------ILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFLPNTSRDH*DQ*LWSSLGLPMNGKPPMETKGF*LPWNSTGGVGFGKLTKTSWPWLL--------KLGYPRFCHPWVK 788
            F+E K   F  K + S LH L   L+   V+ D+   FP  ++IDAL+++     P++ EG       + L   LV  ++  G         +  FETPE  D DK  WFRDEEF+RQTLAG+NP SI+L+TE P+ S LD   YGP +S IT ELIEK+I  +++ EEA+ QKKLF+LDYHDL LPYV +VR+L + T+YGSRT+F    + D   + +   L  P +       K F      T G G+      SW W L          GY +    W++
Sbjct:  319 FTERKEQAFLTKQLLSQLHGLCTGLK---VNKDILPSFPTLASIDALYDDDFRNQPVQPEGGKVRLILDLLAKELVHLVKLEGAEFVEGIRRVFKFETPEIHDMDKLAWFRDEEFARQTLAGMNPLSIQLVTELPIVSKLDELKYGPADSLITKELIEKQINRIMTAEEAVAQKKLFMLDYHDLLLPYVHRVRKLDNKTMYGSRTLFF--LADDGTLRPIAIELTRPKSPHKQQWRKVF------TPGSGYSGSVTGSWEWQLAKIHVLSHDTGYHQLVSHWLR 591          
BLAST of EY726547 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 3.324e-35
Identity = 76/193 (39.38%), Postives = 120/193 (62.18%), Query Frame = 3
Query:    3 FSEVKHLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIF 581
            F E+K   FS+  + +VLH L+PSL  +       F  F  ID L+ EG+ L    QE  +  +   LV+ I+++ + +L ++TP  + +DKF W RD+EF+RQ +AG+NP +I  +  +P  S LDP IYGPPES+IT   I   + G ++V++A+ + KLFI+DYHD +LP+++++  +     Y +RTIF
Sbjct:  321 FEELKQGAFSSGRLRAVLHTLIPSLIASISAETHNFQGFHHIDNLYKEGLRLKLGLQEHLFQKI--PLVQKIQESSEGMLRYDTPSILSKDKFAWLRDDEFARQAVAGINPVNIERLQVFPPVSKLDPAIYGPPESSITETHIAGHLNG-LTVQQAMDEAKLFIVDYHDAYLPFLDRINAIDGRKAYATRTIF 510          
BLAST of EY726547 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.405e-35
Identity = 74/194 (38.14%), Postives = 127/194 (65.46%), Query Frame = 3
Query:    3 FSEVKHLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTL-LPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPP-ESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTI 578
            F E K  TF+A  + +VLH L+PSL+ + +  D  F  F  ID+L+ EG+ L    Q+  +    LP++V  ++ + + +L ++TP+ + +DK+ W RD+EF+RQ +AG+NP +I  +T +P  S LDPEIYGP   SA+T + I  ++ G ++V++A++  +LF++DYHD++LP+++++  L     Y +RTI
Sbjct:  331 FEESKQNTFAACRLKAVLHNLIPSLKASILAED--FANFGEIDSLYKEGLLLKLGFQDDMFKKFPLPKIVTTLQKSSEGLLRYDTPKIVSKDKYAWLRDDEFARQAIAGINPVNIERVTSYPPVSNLDPEIYGPGLHSALTEDHIIGQLDG-LTVQQALETNRLFMVDYHDIYLPFLDRINALDGRKAYATRTI 521          
BLAST of EY726547 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.154e-34
Identity = 79/205 (38.54%), Postives = 120/205 (58.54%), Query Frame = 3
Query:    3 FSEVKHLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQE---------GFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGM-ISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKS--TTLYGSRTIF 581
            F E+K  TF A    ++ H LVPS+  A  + D+ F  FS ID L+   + L   + +         GF N +L        +  + +L ++TP  +  D+F W RD EF RQ LAG+NP +I L+ E P++S LDP +YGP ES +T E+I +E+     ++E+A+++K+LF++DYHD+ LP+VEK+  +K      Y SRTIF
Sbjct:  318 FEEIKRDTFRAGRFKALFHNLVPSIAAALSNLDIPFTCFSDIDNLYKSNIVLGHTEPKDTGLGGFIGGFMNGIL--------NVTETLLKYDTPAVIKWDRFAWLRDNEFGRQALAGVNPVNIELLKELPIRSNLDPALYGPQESVLTEEIIAREVEHYGTTIEKALEEKRLFLVDYHDILLPFVEKINSIKEDPRKTYASRTIF 514          
BLAST of EY726547 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 3.675e-34
Identity = 75/194 (38.66%), Postives = 120/194 (61.86%), Query Frame = 3
Query:    3 FSEVKHLTFSAKTVYSVLHALVPSLETAFVDPDL-GFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIF 581
            F E K+   S   + ++LH  +P L ++ V PD+  F  F  +D LF EG+ L     +  +  +    V+ I++  + +L ++TP+ + +DKF W RD+EF+RQ LAG+NP +I  +  +P  S LDP +YGPPESAIT E I   + GM SV+EA++  +L++LDYHD+FLP+++++        YG+R +F
Sbjct:  307 FEEGKNEMLSEGAIKALLHNFMPLLVSS-VSPDIRDFAGFHDVDNLFKEGLRLKQALHDQLFQKI--PFVRKIQENSEGLLRYDTPDIIKKDKFAWLRDDEFARQALAGINPVNIERLQAFPPVSKLDPAVYGPPESAITEEHIIGHLDGM-SVQEAVEGSRLYMLDYHDIFLPFLDRINAQDGRKAYGTRAVF 496          
The following BLAST results are available for this feature:
BLAST of EY726547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOXC2_ORYSJ2.985e-6056.85Probable lipoxygenase 8, chloroplastic OS=Oryza sa... [more]
LOX23_HORVU2.726e-5653.81Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare... [more]
LOX2_ARATH1.435e-5452.85Lipoxygenase 2, chloroplastic OS=Arabidopsis thali... [more]
LOXC1_ORYSJ1.215e-5353.30Lipoxygenase 7, chloroplastic OS=Oryza sativa subs... [more]
LOX21_HORVU2.813e-4648.29Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare... [more]
LOX22_HORVU3.666e-4239.44Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare... [more]
LOX6_ORYSJ3.324e-3539.38Probable lipoxygenase 6 OS=Oryza sativa subsp. jap... [more]
LOX4_ARATH7.405e-3538.14Lipoxygenase 4, chloroplastic OS=Arabidopsis thali... [more]
LOX6_ARATH2.154e-3438.54Lipoxygenase 6, choloroplastic OS=Arabidopsis thal... [more]
LOX5_ORYSJ3.675e-3438.66Putative lipoxygenase 5 OS=Oryza sativa subsp. jap... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-092-A11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY726547 ID=EY726547; Name=EY726547; organism=Citrus sinensis; type=EST; length=899bp
CATTCTCGGAGGTAAAGCACCTAACATTTTCAGCAAAGACGGTGTACTCA
GTGTTGCATGCGTTGGTACCATCCTTAGAAACCGCCTTTGTCGATCCTGA
TCTGGGGTTTCCATACTTCTCTGCTATTGACGCACTCTTCAATGAAGGAG
TCAACTTGCCTCCACTCAAACAGGAAGGTTTTTGGAACACACTGCTTCCC
AGATTGGTTAAGGCAATTGAGGATACAGGAGATAATATTTTGCTGTTTGA
GACGCCAGAAACAATGGACAGAGACAAATTCTTTTGGTTTAGGGATGAGG
AATTTTCTAGGCAAACTCTCGCTGGTCTCAACCCGTATAGCATAAGGTTG
ATCACGGAATGGCCGTTGAAAAGCACACTCGATCCTGAAATTTACGGACC
ACCAGAATCAGCAATTACCACAGAATTGATTGAAAAAGAAATTGGAGGAA
TGATTTCTGTTGAAGAGGCTATAAAACAAAAGAAGTTGTTCATCTTAGAT
TACCATGACCTATTTTTACCATATGTGGAAAAAGTGAGACAACTCAAAAG
CACAACGTTGTATGGATCTCGCACAATTTTTCTCCCTAACACCAGCCGGG
ACCATTGAGACCAATAGCTATGGAGCTCACTCGGGCTTCCAATGAATGGC
AAGCCCCCAATGGAAACCAAGGGTTTTTAACTTCCTTGGAACTCTACTGG
AGGGGTTGGCTTTGGAAAGCTAACCAAAACCTCTTGGCCTTGGCTTCTGA
AGTTGGGTTACCCCCGCTTTTGCCACCCTTGGGTAAAAAAATCCTTTGTT
GGCCCAAAACCCTTAAGAAAAACACAACCCAATCGGGCAATCCCCGGGGT
GGGATCCCCAATTTAAAAAATTTGGGGGACCCCCTTTTTTTAAAAACAC
back to top