EY726541

Overview
NameEY726541
Unique NameEY726541
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length979
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY726541 vs. ExPASy Swiss-Prot
Match: NEP1_NEPGR (Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 6.432e-27
Identity = 61/140 (43.57%), Postives = 85/140 (60.71%), Query Frame = 3 
Query:  324 ITKLQLAIYNVDR--HELKPAEAQIL-PEDFSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLYQVAYGDGSYTVGDLVTETV 734
            +TK QL    ++R    L+  EA +  P    T V +G     GEY   + +GTP + FS ++DTGSD+ W QC+PCT+C+ QS PIF+P+ SSS+S LPC++  C++L    C  N C Y   YGDGS T G + TET+
Sbjct:   54 LTKFQLLERAIERGSRRLQRLEAMLNGPSGVETSVYAG----DGEYLMNLSIGTPAQPFSAIMDTGSDLIWTQCQPCTQCFNQSTPIFNPQGSSSFSTLPCSSQLCQALSSPTCSNNFCQYTYGYGDGSETQGSMGTETL 189
[Close]
BLAST of EY726541 vs. ExPASy Swiss-Prot
Match: NEP2_NEPGR (Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.444e-26
Identity = 67/181 (37.02%), Postives = 92/181 (50.83%), Query Frame = 3 
Query:  324 ITKLQLAIYNVDRHELKPAEAQILPEDFS---TPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLYQVAYGDGSYTVGDLVTETVVGWKQREREGYRLGVGVMIMEGLFVGICRVAWNLGVGWLPL 857
            +TK +L    + R E +      + +  S   TPV +G     GEY   + +GTP   FS ++DTGSD+ W QC PCT+C+ Q  PIF+P+ SSS+S LPC +  C+ L    C  N C Y   YGDGS T G + TET   ++         G G    +    G    A  +G+GW PL
Sbjct:   55 LTKYELIKRAIKRGERRMRSINAMLQSSSGIETPVYAG----DGEYLMNVAIGTPDSSFSAIMDTGSDLIWTQCEPCTQCFSQPTPIFNPQDSSSFSTLPCESQYCQDLPSETCNNNECQYTYGYGDGSTTQGYMATETFT-FETSSVPNIAFGCG---EDNQGFGQGNGAGLIGMGWGPL 227
The following BLAST results are available for this feature:
BLAST of EY726541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NEP1_NEPGR6.432e-2743.57Aspartic proteinase nepenthesin-1 OS=Nepenthes gra... [more]
NEP2_NEPGR2.444e-2637.02Aspartic proteinase nepenthesin-2 OS=Nepenthes gra... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-092-A04-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY726541 ID=EY726541; Name=EY726541; organism=Citrus sinensis; type=EST; length=979bp
CAGCTGCAGTACGGTCGGATTCCGGGTCGACCCACGCGTCCGCCTCCGCC
TCATCCCGCGGCCTATCAGAAACCGCCACGACGGTTCTCGACGTGTCGTC
CGCACTTCAGCAGACCGAACACATCCTCTCCTTCGAGCCCGAGACGCTTG
AACCATTCGCTGAGGAGTCAGAGACAGCAGCAGAGTCTTTTCCTCTCAAC
TCTTCTTCTTCGTTCTCATTGCCGCTTCACTCGCGTGAAATCCTCCATAA
GACGAGACACAATGATTACAGATCACTTGTTTTATCTCGACTCGAGCGCG
ACTCAGCCCGAGTCAACACTCTTATCACGAAACTCCAGCTGGCTATCTAC
AACGTAGACAGGCACGAGCTCAAGCCCGCCGAGGCACAGATCTTGCCGGA
GGATTTCTCCACTCCGGTCGTGTCCGGTGCCAGCCAGGGCAGCGGCGAAT
ACTTCTCCCGAATTGGCGTCGGTACGCCGCCGAGACAGTTCTCTATGGTG
CTCGACACCGGCAGTGACATTAACTGGCTTCAGTGCCGGCCTTGTACCGA
GTGTTATCAACAATCCGATCCGATTTTTGACCCAAAAACGTCATCGTCTT
ACAGTCCTCTCCCGTGTGCCGCTCCTCAGTGTAAATCCCTCGACGTGTCC
GCTTGTCGTGCGAACAGGTGCCTCTACCAAGTGGCGTACGGTGATGGATC
TTATACCGTGGGGGATTTGGTGACTGAAACGGTGGTCGGTTGGAAACAGC
GGGAGCGTGAAGGGTATCGCCTTGGGGTGGGGGTCATGATAATGGAGGGG
CTCTTTGTTGGGATCTGCCGGGTTGCTTGGAATTTGGGGGTGGGGTGGCT
CCCTCTTTTCTAAACCAAATTAAAAGCGAGGGGTCTGGGGGAAACTGGTT
GTGGGGGACCCGGGGAATCCCCCCCCCCCTCGGGGGGTTTTCCCGAGTTT
CACCTCCGGGCAAAAGGGGGGGGGGGGAC
back to top