EY753308

Overview
NameEY753308
Unique NameEY753308
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753308 vs. ExPASy Swiss-Prot
Match: ODPA_PORPU (Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra purpurea GN=pdhA PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.187e-34
Identity = 78/123 (63.41%), Postives = 93/123 (75.61%), Query Frame = 2
Query:  494 ITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALS*GVPARAGMSELFGRALVAARAR-WILHMFSKTTS-AWGFAFIGEEIQLLRG 856
            +TK + L LYEDM+LGR+FEDMCAQMYY+GKMFGFVHLYNGQEAVSTG IKLL  +D V STYRDHVHALS GVP++  M+ELFG+    +R R   +H+FS   +   GFAFI E I +  G
Sbjct:   19 LTKHKLLVLYEDMLLGRNFEDMCAQMYYKGKMFGFVHLYNGQEAVSTGVIKLLDSKDYVCSTYRDHVHALSKGVPSQNVMAELFGKETGCSRGRGGSMHIFSAPHNFLGGFAFIAEGIPVATG 141          
BLAST of EY753308 vs. ExPASy Swiss-Prot
Match: ODPA_PORYE (Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra yezoensis GN=pdhA PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.005e-33
Identity = 77/127 (60.63%), Postives = 92/127 (72.44%), Query Frame = 2
Query:  482 SNLLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALS*GVPARAGMSELFGRALVAARAR-WILHMFSKTTS-AWGFAFIGEEIQLLRG 856
            + L + K   L LYEDM+LGR+FEDMCAQMYY+GKMFGFVHLYNGQEAVSTG IKLL   D V STYRDHVHALS GVP++  M+ELFG+    ++ R   +H+FS   +   GFAFI E I +  G
Sbjct:   17 TGLNLNKSNLLVLYEDMLLGRNFEDMCAQMYYKGKMFGFVHLYNGQEAVSTGVIKLLNPTDYVCSTYRDHVHALSKGVPSKNVMAELFGKETGCSKGRGGSMHIFSAPHNFLGGFAFIAEGIPVATG 143          
BLAST of EY753308 vs. ExPASy Swiss-Prot
Match: ODPA_RHIME (Pyruvate dehydrogenase E1 component subunit alpha OS=Rhizobium meliloti GN=pdhA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.242e-16
Identity = 49/122 (40.16%), Postives = 72/122 (59.02%), Query Frame = 2
Query:  497 TKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALS*GVPARAGMSELFGRALVAARAR-WILHMFSKTTSAW-GFAFIGEEIQLLRG 856
            +K++ L+ Y +M+L R FE+   Q+Y  G + GF HLY GQEAV  G    LK+ D V++ YRDH H L+ G+ AR  M+EL GR    ++ +   +HMFSK    + G   +G ++ L  G
Sbjct:   32 SKEDDLKAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQLALKEGDQVITGYRDHGHMLACGMSARGVMAELTGRRGGLSKGKGGSMHMFSKEKHFYGGHGIVGAQVSLGTG 153          
BLAST of EY753308 vs. ExPASy Swiss-Prot
Match: ODPA_RICPR (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia prowazekii GN=pdhA PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.612e-15
Identity = 43/121 (35.54%), Postives = 71/121 (58.68%), Query Frame = 2
Query:  500 KQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALS*GVPARAGMSELFGRALVAARAR-WILHMFSKTTSAW-GFAFIGEEIQLLRG 856
            K+E ++ ++DM+L R FE+ C Q+Y  GK+ GF HLY GQEAV +    + KK DS +++YRDH H +  G   +  ++EL GRA   ++ +   +H+F      + G   +G ++ +  G
Sbjct:   12 KEEYIKSFKDMLLLRRFEEKCGQLYGMGKIGGFCHLYIGQEAVISAVAMIKKKGDSTITSYRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFDIPNKFYGGHGIVGAQVPIGTG 132          
BLAST of EY753308 vs. ExPASy Swiss-Prot
Match: ODPA_RICBR (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia bellii (strain RML369-C) GN=pdhA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.105e-15
Identity = 43/121 (35.54%), Postives = 73/121 (60.33%), Query Frame = 2
Query:  500 KQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALS*GVPARAGMSELFGRALVAARAR-WILHMFSKTTSAW-GFAFIGEEIQLLRG 856
            K+E ++ ++DM+L R FE+ C Q+Y  G++ GF HLY GQEAV +    + +KEDS+V++YRDH H +  G   +  ++EL GRA   ++ +   +H+F      + G   +G ++ +  G
Sbjct:   12 KEEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAVDMVKQKEDSMVTSYRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFDVPNKFYGGHGIVGAQVPIGTG 132          
BLAST of EY753308 vs. ExPASy Swiss-Prot
Match: ODPA_RICCN (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia conorii GN=pdhA PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.591e-15
Identity = 42/122 (34.43%), Postives = 73/122 (59.84%), Query Frame = 2
Query:  497 TKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALS*GVPARAGMSELFGRALVAARAR-WILHMFSKTTSAW-GFAFIGEEIQLLRG 856
            TK+E ++ ++DM+L R FE+ C Q+Y  G++ GF HLY GQEAV +    + +K DS +++YRDH H +  G   +  ++EL GRA   ++ +   +H+F+     + G   +G ++ +  G
Sbjct:   11 TKEEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAIDMVKQKGDSTITSYRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFNVPNKFYGGHGIVGAQVPIGTG 132          
BLAST of EY753308 vs. ExPASy Swiss-Prot
Match: ODPA_RICFE (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia felis GN=pdhA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.000e-15
Identity = 42/122 (34.43%), Postives = 72/122 (59.02%), Query Frame = 2
Query:  497 TKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALS*GVPARAGMSELFGRALVAARAR-WILHMFSKTTSAW-GFAFIGEEIQLLRG 856
            TK+E ++ ++DM+L R FE+ C Q+Y  G++ GF HLY GQEAV +    + +K DS +++YRDH H +  G   +  ++EL GRA   ++ +   +H+F      + G   +G ++ +  G
Sbjct:   11 TKEEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAVDTVKQKGDSTITSYRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFDIPNKFYGGHGIVGAQVPIGTG 132          
BLAST of EY753308 vs. ExPASy Swiss-Prot
Match: ODPA_RICTY (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia typhi GN=pdhA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.045e-14
Identity = 42/121 (34.71%), Postives = 71/121 (58.68%), Query Frame = 2
Query:  500 KQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALS*GVPARAGMSELFGRALVAARAR-WILHMFSKTTSAW-GFAFIGEEIQLLRG 856
            K+E ++ ++DM+L R FE+ C Q+Y  G++ GF HLY GQEAV +    + KK DS +++YRDH H +  G   +  ++EL GRA   ++ +   +H+F      + G   +G ++ +  G
Sbjct:   12 KEEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAVELIKKKGDSTITSYRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFDIPNKFYGGHGIVGAQVPIGTG 132          
BLAST of EY753308 vs. ExPASy Swiss-Prot
Match: ODPA_ZYMMO (Pyruvate dehydrogenase E1 component subunit alpha OS=Zymomonas mobilis GN=pdhA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.772e-14
Identity = 47/122 (38.52%), Postives = 70/122 (57.38%), Query Frame = 2
Query:  500 KQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKK-EDSVVSTYRDHVHALS*GVPARAGMSELFGRALVAARAR-WILHMFSKTTSAW-GFAFIGEEIQLLRG 856
            ++E LE Y  M++ R FE+ C Q+Y  G + GF HLY GQEAV+ G    L+   DSV++ YR+H H L+ G+  +  M+EL GRA   +  +   +HMFS     + G   +G ++ L  G
Sbjct:   36 REELLEFYRRMLMIRRFEERCGQLYGLGLIAGFCHLYIGQEAVAVGLQAALQPGRDSVITGYREHGHMLAYGIDPKIVMAELTGRASGISHGKGGSMHMFSTEHKFFGGNGIVGAQVPLGAG 157          
BLAST of EY753308 vs. ExPASy Swiss-Prot
Match: ACOA_BACSU (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha OS=Bacillus subtilis GN=acoA PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.339e-12
Identity = 35/89 (39.33%), Postives = 56/89 (62.92%), Query Frame = 2
Query:  488 LLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALS*GVPARAGMSELFGRA 754
            L +T+++ L +Y+ M+  R FED   +++ +G + GFVHLY G+EAV+ G    L   DS+ ST+R H H ++ G      M+E+FG+A
Sbjct:    9 LSLTEEKALWMYQKMLEIRGFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLHDGDSITSTHRGHGHCIAKGCDLDGMMAEIFGKA 97          
The following BLAST results are available for this feature:
BLAST of EY753308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
ODPA_PORPU1.187e-3463.41Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ODPA_PORYE1.005e-3360.63Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ODPA_RHIME4.242e-1640.16Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ODPA_RICPR1.612e-1535.54Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ODPA_RICBR2.105e-1535.54Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ODPA_RICCN3.591e-1534.43Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ODPA_RICFE8.000e-1534.43Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ODPA_RICTY1.045e-1434.71Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ODPA_ZYMMO6.772e-1438.52Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ACOA_BACSU6.339e-1239.33Acetoin:2,6-dichlorophenolindophenol oxidoreductas... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-C09-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753308 ID=EY753308; Name=EY753308; organism=Citrus sinensis; type=EST; length=865bp
CCACGCGTCCGGTTGTTGAGAGTTGGGTGGCTTCCCCTGTCTTTTCAGCC
ATAATAATATCGATCGAAAATCAAACCAAACAAGTAGGCGATTACTCCCA
AATATCAAGGCCCCTCCTCTCTCCCCGTTCCTCGTTCCCTCCGCCTCGTT
CTTTCCCTCTTATATTTTATTTATACTCTCGTCTCCCTCTCCCATTTACC
TCTCACTTTCTCGGCTCCCAAACACTCTCCTTGCGGATTTCAAAATGGCC
ACGGCTTACTCTTCCGCAAAGTTCGTTCAACCATTGTCTCTGAATTCGAC
AATCAATGGCAGATCTCGTGATAATTCCTTGTTTGATCCTCTCAAAACCG
GTACTTCTTTCCTTGGATCCACTCGCAAACTCCGTGTTAATTCTGTTCAC
TCGAATCAGGGCAATGTTCGCCGTCGACTTCCCGTCGTTGCTGTCTCTGA
GGTTGTTAAGGAGAAGAAGGTCAAGTCAATTTCCAATCTGCTGATCACCA
AGCAAGAAGGCTTAGAGCTATATGAAGATATGATCCTTGGCAGATCTTTT
GAGGACATGTGCGCCCAGATGTACTACAGAGGTAAAATGTTCGGTTTTGT
TCACCTCTACAATGGTCAAGAAGCTGTGTCAACTGGATTTATTAAGCTCT
TGAAGAAAGAAGATTCTGTGGTGAGCACATACCGTGATCACGTGCATGCC
CTGAGTTAAGGGGTCCCTGCTCGTGCTGGGATGAGTGAGCTCTTTGGAAG
GGCACTGGTTGCTGCCAGGGCCAGGTGGATCTTGCACATGTTCTCAAAGA
CCACATCCGCTTGGGGGTTTGCTTTTATTGGGGAGGAAATTCAGTTGCTC
CGGGGGCGCATTCAC
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