EY753301
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY753301 vs. ExPASy Swiss-Prot
Match: PSMD1_DROME (26S proteasome non-ATPase regulatory subunit 1 OS=Drosophila melanogaster GN=Rpn2 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.408e-15 Identity = 45/107 (42.06%), Postives = 68/107 (63.55%), Query Frame = 2 Query: 170 VSSAGGLLAMLNESHPSLKLHALSNLNSYDYKCWPEISTSVXMIEKGCEDEEFDKHHRQLAGLLVSKVFHDSGELNDQLSYTLGAGALTDVLIDHDYVITLTAKAIN 490 ++SA G++++L+E P LK+ AL L++ + WPEIS S+ IE ED F ++ +LAG++ SKVF+ G D L+Y LGAG L DV ++Y T+ AK I+ Sbjct: 3 LTSAAGIISLLDEPMPDLKVFALKKLDNIVDEFWPEISESIEKIEMLHEDRSFPEN--KLAGMVASKVFYHLGSFEDALTYALGAGDLFDVNARNEYTETIIAKCID 107
BLAST of EY753301 vs. ExPASy Swiss-Prot
Match: PSMD1_RAT (26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus GN=Psmd1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.108e-15 Identity = 48/108 (44.44%), Postives = 65/108 (60.19%), Query Frame = 2 Query: 167 MVSSAGGLLAMLNESHPSLKLHALSNLNSYDYKCWPEISTSVXMIEKGCEDEEFDKHHRQLAGLLVSKVFHDSGELNDQLSYTLGAGALTDVLIDHDYVITLTAKAIN 490 M++SA G++++L+E P LK AL LN+ W EIS SV IE EDE F RQ A L+ SKVF+ G + L+Y LGAG L +V + +YV T+ AK I+ Sbjct: 1 MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCID 106
BLAST of EY753301 vs. ExPASy Swiss-Prot
Match: PSMD1_PONAB (26S proteasome non-ATPase regulatory subunit 1 OS=Pongo abelii GN=PSMD1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.108e-15 Identity = 48/108 (44.44%), Postives = 65/108 (60.19%), Query Frame = 2 Query: 167 MVSSAGGLLAMLNESHPSLKLHALSNLNSYDYKCWPEISTSVXMIEKGCEDEEFDKHHRQLAGLLVSKVFHDSGELNDQLSYTLGAGALTDVLIDHDYVITLTAKAIN 490 M++SA G++++L+E P LK AL LN+ W EIS SV IE EDE F RQ A L+ SKVF+ G + L+Y LGAG L +V + +YV T+ AK I+ Sbjct: 1 MITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCID 106
BLAST of EY753301 vs. ExPASy Swiss-Prot
Match: PSMD1_MOUSE (26S proteasome non-ATPase regulatory subunit 1 OS=Mus musculus GN=Psmd1 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.108e-15 Identity = 48/108 (44.44%), Postives = 65/108 (60.19%), Query Frame = 2 Query: 167 MVSSAGGLLAMLNESHPSLKLHALSNLNSYDYKCWPEISTSVXMIEKGCEDEEFDKHHRQLAGLLVSKVFHDSGELNDQLSYTLGAGALTDVLIDHDYVITLTAKAIN 490 M++SA G++++L+E P LK AL LN+ W EIS SV IE EDE F RQ A L+ SKVF+ G + L+Y LGAG L +V + +YV T+ AK I+ Sbjct: 1 MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCID 106
BLAST of EY753301 vs. ExPASy Swiss-Prot
Match: PSMD1_HUMAN (26S proteasome non-ATPase regulatory subunit 1 OS=Homo sapiens GN=PSMD1 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 4.108e-15 Identity = 48/108 (44.44%), Postives = 65/108 (60.19%), Query Frame = 2 Query: 167 MVSSAGGLLAMLNESHPSLKLHALSNLNSYDYKCWPEISTSVXMIEKGCEDEEFDKHHRQLAGLLVSKVFHDSGELNDQLSYTLGAGALTDVLIDHDYVITLTAKAIN 490 M++SA G++++L+E P LK AL LN+ W EIS SV IE EDE F RQ A L+ SKVF+ G + L+Y LGAG L +V + +YV T+ AK I+ Sbjct: 1 MITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCID 106
BLAST of EY753301 vs. ExPASy Swiss-Prot
Match: PSMD1_CHICK (26S proteasome non-ATPase regulatory subunit 1 OS=Gallus gallus GN=PSMD1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.108e-15 Identity = 48/108 (44.44%), Postives = 65/108 (60.19%), Query Frame = 2 Query: 167 MVSSAGGLLAMLNESHPSLKLHALSNLNSYDYKCWPEISTSVXMIEKGCEDEEFDKHHRQLAGLLVSKVFHDSGELNDQLSYTLGAGALTDVLIDHDYVITLTAKAIN 490 M++SA G++++L+E P LK AL LN+ W EIS SV IE EDE F RQ A L+ SKVF+ G + L+Y LGAG L +V + +YV T+ AK I+ Sbjct: 1 MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCID 106
BLAST of EY753301 vs. ExPASy Swiss-Prot
Match: RPN2_SCHPO (26S proteasome regulatory subunit rpn2 OS=Schizosaccharomyces pombe GN=rpn2 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.237e-11 Identity = 42/109 (38.53%), Postives = 65/109 (59.63%), Query Frame = 2 Query: 164 TMVSSAGGLLAMLNESHPSLKLHALSNLNSYDYKCWPEISTSVXMIEKGCEDEEFDKHHRQLAGLLVSKVFHDSGELNDQLSYTLGAGALTDVLIDHDYVITLTAKAIN 490 ++++SAGGL+A+L+E L++HAL + + + WPEIS V IE ED F + R+LA L+VSKV++ GE ++ L + L +G + DY TL K I+ Sbjct: 10 SIITSAGGLMALLDEQERELQVHALLKIYEFIDQLWPEISDDVTKIEVMYEDHSFPE--RELAALVVSKVYYYLGEYDEALLFALSSGPKFLHDKNSDYKETLIFKCID 116 The following BLAST results are available for this feature:
BLAST of EY753301 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY753301 ID=EY753301; Name=EY753301; organism=Citrus sinensis; type=EST; length=797bpback to top |