EY753277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753277 vs. ExPASy Swiss-Prot
Match: HDA19_ARATH (Histone deacetylase 19 OS=Arabidopsis thaliana GN=HDA19 PE=1 SV=2) HSP 1 Score: 239.58 bits (610), Expect = 1.901e-62 Identity = 116/147 (78.91%), Postives = 123/147 (83.67%), Query Frame = 2 Query: 131 MDTGGNSLPSGTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQHDQLRQLKRFNVGEDCPVFDRLFSLLSNLCWGLCWWCCQV*TPASEIFAINWARG 571 MDTGGNSL SG DGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQ+MQVLKPFPAR+RDLCRFHADDYVSFLRSITPETQ DQ+RQLKRFNVGEDCPVFD L+S G ++ +I AINWA G Sbjct: 1 MDTGGNSLASGPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQIRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGSVKLNHGLCDI-AINWAGG 146
BLAST of EY753277 vs. ExPASy Swiss-Prot
Match: HDA19_MAIZE (Probable histone deacetylase 19 OS=Zea mays PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 5.805e-58 Identity = 89/115 (77.39%), Postives = 103/115 (89.57%), Query Frame = 2 Query: 137 TGGNSLPS-GTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQHDQLRQLKRFNVGEDCPVFDRLFS 478 +GGNSLPS G DG KR+VCYFYDP+VGNYYYGQGHPMKPHRIRMTH+LLA YGLL MQV +P PARER+LCRFHA++Y++FLRS+TPETQ DQ+R LKRFNVGE+CPV D L+S Sbjct: 8 SGGNSLPSVGPDGQKRRVCYFYDPDVGNYYYGQGHPMKPHRIRMTHSLLARYGLLNQMQVYRPNPARERELCRFHAEEYINFLRSVTPETQQDQIRLLKRFNVGEECPVLDGLYS 122 HSP 2 Score: 46.2098 bits (108), Expect = 5.805e-58 Identity = 24/44 (54.55%), Postives = 25/44 (56.82%), Query Frame = 3 Query: 480 FCQTYAGGSVGGAVKFELRPQRFLLSIGPGDLQHGKKCETIGIC 611 FCQTYAG SVGGAVKF + G L H KKCE G C Sbjct: 123 FCQTYAGASVGGAVKF--NHGHDIAINWSGGLHHAKKCEASGFC 164
BLAST of EY753277 vs. ExPASy Swiss-Prot
Match: HDAC1_CHICK (Histone deacetylase 1 OS=Gallus gallus GN=HDAC1 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.241e-37 Identity = 71/136 (52.21%), Postives = 94/136 (69.12%), Query Frame = 2 Query: 164 TDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQHDQLRQLKRFNVGEDCPVFDRLFSLLSNLCWGLCWWCCQV*TPASEIFAINWARG 571 T G KRKVCY+YD +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A ++ ++H+DDY+ FLRSI P+ + +Q++RFNVGEDCPVFD LF G ++ ++I A+NWA G Sbjct: 4 TQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDI-AVNWAGG 138
BLAST of EY753277 vs. ExPASy Swiss-Prot
Match: HDAC1_RAT (Histone deacetylase 1 OS=Rattus norvegicus GN=Hdac1 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.620e-37 Identity = 71/136 (52.21%), Postives = 94/136 (69.12%), Query Frame = 2 Query: 164 TDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQHDQLRQLKRFNVGEDCPVFDRLFSLLSNLCWGLCWWCCQV*TPASEIFAINWARG 571 T G KRKVCY+YD +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A ++ ++H+DDY+ FLRSI P+ + +Q++RFNVGEDCPVFD LF G ++ ++I A+NWA G Sbjct: 4 TQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDI-AVNWAGG 138
BLAST of EY753277 vs. ExPASy Swiss-Prot
Match: HDAC1_MOUSE (Histone deacetylase 1 OS=Mus musculus GN=Hdac1 PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.620e-37 Identity = 71/136 (52.21%), Postives = 94/136 (69.12%), Query Frame = 2 Query: 164 TDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQHDQLRQLKRFNVGEDCPVFDRLFSLLSNLCWGLCWWCCQV*TPASEIFAINWARG 571 T G KRKVCY+YD +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A ++ ++H+DDY+ FLRSI P+ + +Q++RFNVGEDCPVFD LF G ++ ++I A+NWA G Sbjct: 4 TQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDI-AVNWAGG 138
BLAST of EY753277 vs. ExPASy Swiss-Prot
Match: HDAC1_BOVIN (Histone deacetylase 1 OS=Bos taurus GN=HDAC1 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.620e-37 Identity = 71/136 (52.21%), Postives = 94/136 (69.12%), Query Frame = 2 Query: 164 TDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQHDQLRQLKRFNVGEDCPVFDRLFSLLSNLCWGLCWWCCQV*TPASEIFAINWARG 571 T G KRKVCY+YD +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A ++ ++H+DDY+ FLRSI P+ + +Q++RFNVGEDCPVFD LF G ++ ++I A+NWA G Sbjct: 4 TQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDI-AVNWAGG 138
BLAST of EY753277 vs. ExPASy Swiss-Prot
Match: HDAC1_PONAB (Histone deacetylase 1 OS=Pongo abelii GN=HDAC1 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.610e-37 Identity = 70/136 (51.47%), Postives = 94/136 (69.12%), Query Frame = 2 Query: 164 TDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQHDQLRQLKRFNVGEDCPVFDRLFSLLSNLCWGLCWWCCQV*TPASEIFAINWARG 571 T G +RKVCY+YD +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A ++ ++H+DDY+ FLRSI P+ + +Q++RFNVGEDCPVFD LF G ++ ++I A+NWA G Sbjct: 4 TQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDI-AVNWAGG 138
BLAST of EY753277 vs. ExPASy Swiss-Prot
Match: HDAC1_HUMAN (Histone deacetylase 1 OS=Homo sapiens GN=HDAC1 PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.610e-37 Identity = 70/136 (51.47%), Postives = 94/136 (69.12%), Query Frame = 2 Query: 164 TDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQHDQLRQLKRFNVGEDCPVFDRLFSLLSNLCWGLCWWCCQV*TPASEIFAINWARG 571 T G +RKVCY+YD +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A ++ ++H+DDY+ FLRSI P+ + +Q++RFNVGEDCPVFD LF G ++ ++I A+NWA G Sbjct: 4 TQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDI-AVNWAGG 138
BLAST of EY753277 vs. ExPASy Swiss-Prot
Match: HDA1A_XENLA (Probable histone deacetylase 1-A OS=Xenopus laevis GN=hdac1-A PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.372e-36 Identity = 69/136 (50.74%), Postives = 94/136 (69.12%), Query Frame = 2 Query: 164 TDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQHDQLRQLKRFNVGEDCPVFDRLFSLLSNLCWGLCWWCCQV*TPASEIFAINWARG 571 T G K+KVCY+YD +VGNYYYGQGHPMKPHRIRMTH LL +YGL + M++ +P A D+ ++H+DDY+ FLRSI P+ + +Q++RFNVGEDCPVFD LF G ++ ++I ++NW+ G Sbjct: 4 TLGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIFRPHKASAEDMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDI-SVNWSGG 138
BLAST of EY753277 vs. ExPASy Swiss-Prot
Match: HDA6_ARATH (Histone deacetylase 6 OS=Arabidopsis thaliana GN=HDA6 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.807e-36 Identity = 75/148 (50.68%), Postives = 97/148 (65.54%), Query Frame = 2 Query: 134 DTGGNSLPSGTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQHD--QLRQLKRFNVGEDCPVFDRLFSLLSNLCWGLCWWCCQV*TPASEIFAINWARG 571 D G SLPSG DG KR+V YFY+P +G+YYYGQGHPMKPHRIRM H+L+ HY L + +++ +P A D+ RFH+ +YV FL S++PE+ D R L+RFNVGEDCPVFD LF G ++ ++I AINW G Sbjct: 4 DESGISLPSGPDGRKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIIHYHLHRRLEISRPSLADASDIGRFHSPEYVDFLASVSPESMGDPSAARNLRRFNVGEDCPVFDGLFDFCRASAGGSIGAAVKLNRQDADI-AINWGGG 150 The following BLAST results are available for this feature:
BLAST of EY753277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753277 ID=EY753277; Name=EY753277; organism=Citrus sinensis; type=EST; length=907bpback to top |