EY753067

Overview
NameEY753067
Unique NameEY753067
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY753067 vs. ExPASy Swiss-Prot
Match: RAN3_ARATH (GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana GN=RAN3 PE=1 SV=2)

HSP 1 Score: 370.548 bits (950), Expect = 7.024e-102
Identity = 183/214 (85.51%), Postives = 187/214 (87.38%), Query Frame = 1 
Query:   52 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPIIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLCWGS*LAFCRVSCPLLPQRCKSIWVAHQQHGS*NLVAAAVNLP 693
            MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEP IGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL   + L F   S  L P   +    A QQH +    AA+  LP
Sbjct:    1 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVE-SPALAPPEVQIDLAAQQQHEAELAAAASQPLP 213
[Close]
BLAST of EY753067 vs. ExPASy Swiss-Prot
Match: RANB1_TOBAC (GTP-binding nuclear protein Ran-B1 OS=Nicotiana tabacum GN=RAN-B1 PE=2 SV=1)

HSP 1 Score: 369.392 bits (947), Expect = 1.565e-101
Identity = 184/214 (85.98%), Postives = 186/214 (86.92%), Query Frame = 1 
Query:   52 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPIIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLCWGS*LAFCRVSCPLLPQRCKSIWVAHQQHGS*NLVAAAVNLP 693
            MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEP IGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL   + L F   S  L P   +    A Q H    L AAA  LP
Sbjct:    1 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVE-SPALAPPEVQIDLAAQQLHEQELLQAAAHALP 213
[Close]
BLAST of EY753067 vs. ExPASy Swiss-Prot
Match: RAN2_ARATH (GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana GN=RAN2 PE=1 SV=3)

HSP 1 Score: 369.007 bits (946), Expect = 2.044e-101
Identity = 182/210 (86.67%), Postives = 185/210 (88.10%), Query Frame = 1 
Query:   52 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPIIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLCWGS*LAFCRVSCPLLPQRCKSIWVAHQQHGS*NLVAAA 681
            MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEP IGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL     L F  V  P L      + +A QQ    +L AAA
Sbjct:    1 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHF--VESPALAPPEVHLDIAAQQQNEADLAAAA 208
[Close]
BLAST of EY753067 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSJ (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica GN=RAN1 PE=2 SV=1)

HSP 1 Score: 367.851 bits (943), Expect = 4.553e-101
Identity = 181/214 (84.58%), Postives = 184/214 (85.98%), Query Frame = 1 
Query:   52 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPIIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLCWGS*LAFCRVSCPLLPQRCKSIWVAHQQHGS*NLVAAAVNLP 693
            MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEP IGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVT+RLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE+SAKSNYNFEKPFLYLARKL     L F      L P        A QQH +    AAA  LP
Sbjct:    1 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEVSAKSNYNFEKPFLYLARKLAGDGNLHFVETPA-LAPPDVTIDLAAQQQHEAELAAAAAQPLP 213
[Close]
BLAST of EY753067 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSI (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica GN=RAN1 PE=2 SV=2)

HSP 1 Score: 367.851 bits (943), Expect = 4.553e-101
Identity = 181/214 (84.58%), Postives = 184/214 (85.98%), Query Frame = 1 
Query:   52 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPIIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLCWGS*LAFCRVSCPLLPQRCKSIWVAHQQHGS*NLVAAAVNLP 693
            MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEP IGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVT+RLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE+SAKSNYNFEKPFLYLARKL     L F      L P        A QQH +    AAA  LP
Sbjct:    1 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEVSAKSNYNFEKPFLYLARKLAGDGNLHFVETPA-LAPPDVTIDLAAQQQHEAELAAAAAQPLP 213
[Close]
BLAST of EY753067 vs. ExPASy Swiss-Prot
Match: RAN1_ARATH (GTP-binding nuclear protein Ran-1 OS=Arabidopsis thaliana GN=RAN1 PE=1 SV=1)

HSP 1 Score: 367.851 bits (943), Expect = 4.553e-101
Identity = 182/210 (86.67%), Postives = 184/210 (87.62%), Query Frame = 1 
Query:   52 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPIIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLCWGS*LAFCRVSCPLLPQRCKSIWVAHQQHGS*NLVAAA 681
            MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEP IGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL     L F  V  P L      I +A QQ     L+ AA
Sbjct:    1 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHF--VETPALAPPEVHIDIADQQKNEAELLQAA 208
[Close]
BLAST of EY753067 vs. ExPASy Swiss-Prot
Match: RAN_VICFA (GTP-binding nuclear protein Ran/TC4 OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 7.766e-101
Identity = 183/214 (85.51%), Postives = 186/214 (86.92%), Query Frame = 1 
Query:   52 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPIIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLCWGS*LAFCRVSCPLLPQRCKSIWVAHQQHGS*NLVAAAVNLP 693
            MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEP IGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL   + L F  V  P L      I +A QQ    N +  A N P
Sbjct:    1 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHF--VESPALAPPEVQIDIALQQRHE-NEILEAANQP 211
[Close]
BLAST of EY753067 vs. ExPASy Swiss-Prot
Match: RAN2_SOLLC (GTP-binding nuclear protein Ran2 OS=Solanum lycopersicum GN=RAN2 PE=2 SV=1)

HSP 1 Score: 363.229 bits (931), Expect = 1.049e-100
Identity = 172/179 (96.09%), Postives = 172/179 (96.09%), Query Frame = 1 
Query:   52 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPIIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLCWGS*LAF 588
            MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEP IGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL     L F
Sbjct:    1 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDGNLHF 179

HSP 2 Score: 26.1794 bits (56), Expect = 1.049e-100
Identity = 15/38 (39.47%), Postives = 22/38 (57.89%), Query Frame = 3 
Query:  606 LAPPEVQIHLGCSPTTWKLKFGGCGCQPPPNEEKDAFE 719
            LAPPEVQI L  +    + +      QP P+++ +AFE
Sbjct:  185 LAPPEVQIDL-AAQALHEQELQAALNQPLPDDDDEAFE 221
[Close]
BLAST of EY753067 vs. ExPASy Swiss-Prot
Match: RANA1_TOBAC (GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum GN=RAN-A1 PE=2 SV=1)

HSP 1 Score: 365.54 bits (937), Expect = 2.260e-100
Identity = 181/214 (84.58%), Postives = 184/214 (85.98%), Query Frame = 1 
Query:   52 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPIIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLCWGS*LAFCRVSCPLLPQRCKSIWVAHQQHGS*NLVAAAVNLP 693
            MALP QQ VDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEP IGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL     L F   S  L P   +    A QQH +    AA+  LP
Sbjct:    1 MALPGQQAVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVE-SPALAPPEVQIDLAAQQQHEAELAAAASQPLP 213
[Close]
BLAST of EY753067 vs. ExPASy Swiss-Prot
Match: RAN1_SOLLC (GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum GN=RAN1 PE=2 SV=1)

HSP 1 Score: 363.229 bits (931), Expect = 1.121e-99
Identity = 172/179 (96.09%), Postives = 172/179 (96.09%), Query Frame = 1 
Query:   52 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPIIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLCWGS*LAF 588
            MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEP IGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL     L F
Sbjct:    1 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDGNLHF 179
The following BLAST results are available for this feature:
BLAST of EY753067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAN3_ARATH7.024e-10285.51GTP-binding nuclear protein Ran-3 OS=Arabidopsis t... [more]
RANB1_TOBAC1.565e-10185.98GTP-binding nuclear protein Ran-B1 OS=Nicotiana ta... [more]
RAN2_ARATH2.044e-10186.67GTP-binding nuclear protein Ran-2 OS=Arabidopsis t... [more]
RAN1_ORYSJ4.553e-10184.58GTP-binding nuclear protein Ran-1 OS=Oryza sativa ... [more]
RAN1_ORYSI4.553e-10184.58GTP-binding nuclear protein Ran-1 OS=Oryza sativa ... [more]
RAN1_ARATH4.553e-10186.67GTP-binding nuclear protein Ran-1 OS=Arabidopsis t... [more]
RAN_VICFA7.766e-10185.51GTP-binding nuclear protein Ran/TC4 OS=Vicia faba ... [more]
RAN2_SOLLC1.049e-10096.09GTP-binding nuclear protein Ran2 OS=Solanum lycope... [more]
RANA1_TOBAC2.260e-10084.58GTP-binding nuclear protein Ran-A1 OS=Nicotiana ta... [more]
RAN1_SOLLC1.121e-9996.09GTP-binding nuclear protein Ran1 OS=Solanum lycope... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-050-F07-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753067 ID=EY753067; Name=EY753067; organism=Citrus sinensis; type=EST; length=898bp
ACTGAGCGCTCTCTCGCTTAAATTCAAAATCCAAACGCAACAAATCAACT
CATGGCTCTGCCGAATCAGCAAACTGTTGATTATCCAAGCTTCAAACTTG
TAATTGTCGGCGATGGTGGCACTGGGAAGACTACCTTTGTGAAGAGGCAT
CTTACTGGTGAATTCGAGAAGAAATATGAACCGATCATTGGTGTGGAAGT
TCATCCATTGGACTTCTTTACCAACTGTGGAAAAATACGATTCTATTGCT
GGGACACTGCCGGACAAGAGAAGTTTGGTGGTCTTAGAGATGGATACTAC
ATCCATGGGCAATGTGCTATCATCATGTTTGATGTTACTGCCCGCTTGAC
GTATAAGAATGTTCCGACGTGGCACCGTGATCTCTGCAGGGTGTGTGAAA
ACATCCCAATTGTTCTTTGCGGGAACAAGGTCGATGTGAAGAACAGGCAG
GTGAAAGCAAAGCAGGTTACTTTCCACAGGAAGAAGAATTTGCAGTACTA
TGAGATCTCAGCCAAGAGCAATTACAACTTTGAGAAGCCTTTTCTTTACC
TTGCCAGAAAACTTTGCTGGGGATCCTAACTTGCATTTTGTCGAGTCTCC
TGCCCCTTGCTCCCCCAGAGGTGCAAATCCATTTGGGTTGCTCACCAACA
ACATGGAAGCTGAAATTTGGTGGCTGCGGCTGTCAACCTCCCCCAAATGA
AGAAAAAGACGCCTTCGAGTGGGAAAAAAAACAAGGGAATCGTGGGGATT
TTTGGGGGGGAAAATTTCAATAATGGATGGGTTCGAAGTTCTGTGTGGGT
GTTCTTTTGACTGGACCTTTTGATATTATCCCATTTGAAGAGGTTAAATA
ACAAATTAGGTGTACTCTCTAGCCAGTGGCAGAATCCATGGTAAACGA
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