FK826749

Overview
NameFK826749
Unique NameFK826749
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length518
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13691 contig Csv1_Contig13691:1..518. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FK826749 vs. ExPASy Swiss-Prot
Match: CHL1_ARATH (Nitrate/chlorate transporter OS=Arabidopsis thaliana GN=CHL1 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 4.633e-32
Identity = 69/174 (39.66%), Postives = 106/174 (60.92%), Query Frame = 3
Query:   12 KVSHTEKFKCLDKAAIIEDNAFANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTTFTVEQATFMNRKIGSFTVPSGXXXXXXXXXXXXXXXXNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETS-----VQKHIQISAFWLVPQ 518
            K+ HTE+F+ LDKAAI +  A    N  N W +ST+T+VEEVK ++++LPIWATCILFWTV++Q+TT +V Q+  ++R IGSF +P                   ++V + L +K+ +   G+  LQR+G GL F  +AM V+A++E +R  T+       K + +  + L+PQ
Sbjct:  295 KLPHTEQFRSLDKAAIRDQEAGVTSNVFNKWTLSTLTDVEEVKQIVRMLPIWATCILFWTVHAQLTTLSVAQSETLDRSIGSFEIPPASMAVFYVGGLLLTTAVYDRVAIRLCKKLFNYPHGLRPLQRIGLGLFFGSMAMAVAALVELKRLRTAHAHGPTVKTLPLGFYLLIPQ 468          
BLAST of FK826749 vs. ExPASy Swiss-Prot
Match: PTR1_ARATH (Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.542e-27
Identity = 67/176 (38.07%), Postives = 99/176 (56.25%), Query Frame = 3
Query:   12 KVSHTEKFKCLDKAAIIEDNAFANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTTFTVEQATFMNRKIG-SFTVPSGXXXXXXXXXXXXXXXXNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQR------RETSVQKHIQISAFWLVPQ 518
            K+ HT+  K  DKAA+   +    + + N W + +VT+VEE+K ++ LLP+WAT I+F TVYSQM+T  V Q   M++ +G +F +PS                  ++  +PLARK T + +G T LQR+G GL+ S+ AMI + V+E  R           QK I +S FW +PQ
Sbjct:  285 KLVHTDNLKFFDKAAVESQSDSIKDGEVNPWRLCSVTQVEELKSIITLLPVWATGIVFATVYSQMSTMFVLQGNTMDQHMGKNFEIPSASLSLFDTVSVLFWTPVYDQFIIPLARKFTRNERGFTQLQRMGIGLVVSIFAMITAGVLEVVRLDYVKTHNAYDQKQIHMSIFWQIPQ 460          
BLAST of FK826749 vs. ExPASy Swiss-Prot
Match: PTR2_ARATH (Peptide transporter PTR2 OS=Arabidopsis thaliana GN=PTR2 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 3.436e-27
Identity = 65/176 (36.93%), Postives = 99/176 (56.25%), Query Frame = 3
Query:   12 KVSHTEKFKCLDKAAIIEDNAFANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTTFTVEQATFMNRKIGSFTVPSGXXXXXXXXXXXXXXXXNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQ-------KHIQISAFWLVPQ 518
            K+ HT+  + LDKAA+I +    + + +NSW + TVT+VEE+K+++++ PIWA+ I+F  VY+QM+T  V+Q   MN KIGSF +P                   ++  VPLARK T   +G T +QR+G GL  SV+ M  +A++E  R   +           + IS  W +PQ
Sbjct:  303 KIEHTDDCQYLDKAAVISEEESKSGDYSNSWRLCTVTQVEELKILIRMFPIWASGIIFSAVYAQMSTMFVQQGRAMNCKIGSFQLPPAALGTFDTASVIIWVPLYDRFIVPLARKFTGVDKGFTEIQRMGIGLFVSVLCMAAAAIVEIIRLHMANDLGLVESGAPVPISVLWQIPQ 478          
BLAST of FK826749 vs. ExPASy Swiss-Prot
Match: PTR5_ARATH (Peptide transporter PTR5 OS=Arabidopsis thaliana GN=PTR5 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 9.358e-25
Identity = 66/177 (37.29%), Postives = 100/177 (56.50%), Query Frame = 3
Query:   12 KVSHTEKFKCLDKAAIIEDNAFANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTTFTVEQATFMNRKIG-SFTVPSGXXXXXXXXXXXXXXXXNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKH-------IQISAFWLVPQ 518
            K+ HT+     DKAA+  ++      K++SW + TVT+VEE+K +++LLPIWAT I+F +VYSQM T  V Q   +++ +G +F +PS                  +K+ VP ARK T   +G T LQR+G GL+ S+ +M+ + ++E  R    VQ H       I ++ FW VPQ
Sbjct:  285 KLEHTKILTFFDKAAVETESDNKGAAKSSSWKLCTVTQVEELKALIRLLPIWATGIVFASVYSQMGTVFVLQGNTLDQHMGPNFKIPSASLSLFDTLSVLFWAPVYDKLIVPFARKYTGHERGFTQLQRIGIGLVISIFSMVSAGILEVARL-NYVQTHNLYNEETIPMTIFWQVPQ 460          
BLAST of FK826749 vs. ExPASy Swiss-Prot
Match: PTR3A_ARATH (Peptide transporter PTR3-A OS=Arabidopsis thaliana GN=PTR3-A PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 7.181e-17
Identity = 51/160 (31.87%), Postives = 85/160 (53.12%), Query Frame = 3
Query:   66 DNAFANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTTFTVEQATFMNRKI-GSFTVPSGXXXXXXXXXXXXXXXXNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQK--------HIQISAFWLVPQ 518
            D A      N+ W + T TEVEE K +L++LP+     +   + +Q+ T  V+Q T ++RK+ GSF++P                   ++VFV + RK T + +G+T LQR+G GLIF ++ MIV++V E+ R + +            + ++ F L+PQ
Sbjct:  303 DRASLKTGTNHKWNLCTTTEVEETKQMLRMLPVLFITFVPSMMLAQINTLFVKQGTTLDRKVTGSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKFTGNPRGITLLQRMGIGLIFHILIMIVASVTERYRLKVAADHGLIHQTGVKLPLTIFALLPQ 462          
BLAST of FK826749 vs. ExPASy Swiss-Prot
Match: PTR2X_ARATH (Probable peptide transporter At1g52190 OS=Arabidopsis thaliana GN=At1g52190 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.225e-16
Identity = 55/180 (30.56%), Postives = 97/180 (53.89%), Query Frame = 3
Query:   24 TEKFKCLDKAAII---EDNAFANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTTFTVEQATFMNRKIG----SFTVPSGXXXXXXXXXXXXXXXXNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKH--------IQISAFWLVPQ 518
            ++K + L+KA +I   E+   ++    N W + T  +VEE+K ++K++PIW+T I+  ++ +  ++F + QAT M+R++     SF VP+G                 ++  +PLA KI      ++   R+G GL  S +AM +SA++E  RR+ ++ +         + ISA WLVPQ
Sbjct:  288 SQKLRFLNKACLISNREEEIGSDGFALNPWRLCTTDKVEELKALIKVIPIWSTGIMM-SINTSQSSFQLLQATSMDRRLSRHGSSFQVPAGSFGMFTIIALALWVILYDRAVIPLASKIRGRPFRLSVKLRMGLGLFMSFLAMAISAMVESFRRKKAISQGYANNSNAVVDISAMWLVPQ 466          
BLAST of FK826749 vs. ExPASy Swiss-Prot
Match: PTR3B_ARATH (Peptide transporter PTR3-B OS=Arabidopsis thaliana GN=PTR3-B PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.554e-14
Identity = 44/160 (27.50%), Postives = 84/160 (52.50%), Query Frame = 3
Query:   66 DNAFANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTTFTVEQATFMNRKI-GSFTVPSGXXXXXXXXXXXXXXXXNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQK--------HIQISAFWLVPQ 518
            + A       + W + T+TEVEE K +LK+LP+     +   + +Q+ T  ++Q T ++R++  +F++P                   ++VFV   RK+T + +G+T LQR+G G+I  ++ MI++++ E+ R + + +          I +S F L+PQ
Sbjct:  303 NRASLKTGSTHKWRLCTITEVEETKQMLKMLPVLFVTFVPSMMLAQIMTLFIKQGTTLDRRLTNNFSIPPASLLGFTTFSMLVSIVIYDRVFVKFMRKLTGNPRGITLLQRMGIGMILHILIMIIASITERYRLKVAAEHGLTHQTAVPIPLSIFTLLPQ 462          
The following BLAST results are available for this feature:
BLAST of FK826749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
CHL1_ARATH4.633e-3239.66Nitrate/chlorate transporter OS=Arabidopsis thalia... [more]
PTR1_ARATH1.542e-2738.07Peptide transporter PTR1 OS=Arabidopsis thaliana G... [more]
PTR2_ARATH3.436e-2736.93Peptide transporter PTR2 OS=Arabidopsis thaliana G... [more]
PTR5_ARATH9.358e-2537.29Peptide transporter PTR5 OS=Arabidopsis thaliana G... [more]
PTR3A_ARATH7.181e-1731.88Peptide transporter PTR3-A OS=Arabidopsis thaliana... [more]
PTR2X_ARATH1.225e-1630.56Probable peptide transporter At1g52190 OS=Arabidop... [more]
PTR3B_ARATH2.554e-1427.50Peptide transporter PTR3-B OS=Arabidopsis thaliana... [more]
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Properties
Property NameValue
Genbank descriptionclone598 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 598, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826749 ID=FK826749; Name=FK826749; organism=Citrus sinensis; type=EST; length=518bp
ACCAAAATGCGAAGGTCTCCCACACAGAGAAATTCAAGTGCCTGGACAAG
GCTGCAATAATTGAAGACAATGCCTTTGCCAATGAAAACAAAAACAATTC
TTGGATCGTTTCTACCGTGACTGAAGTTGAAGAAGTGAAGATGGTGTTAA
AGCTTCTCCCAATTTGGGCCACGTGTATACTTTTCTGGACAGTTTATTCA
CAAATGACTACATTCACTGTGGAGCAGGCAACCTTCATGAATCGAAAAAT
TGGCTCCTTTACTGTGCCTTCAGGTTCTTTATCAGCCTTTCTATTCATAA
CCATCCTTCTCTTTACTTCACTAAACGAAAAAGTGTTTGTTCCCCTGGCT
AGAAAAATCACACACTCCATCCAAGGAATGACAAGCCTTCAGAGGGTTGG
CACTGGACTAATTTTTTCAGTGATTGCTATGATTGTTTCTGCCGTTATTG
AGCAGCAAAGGAGGGAAACTTCAGTTCAAAAGCACATCCAAATAAGTGCT
TTCTGGCTAGTCCCTCAG
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