EY725008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY725008 vs. ExPASy Swiss-Prot
Match: YDVG_SCHPO (Uncharacterized helicase C6F12.16c OS=Schizosaccharomyces pombe GN=SPAC6F12.16c PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.782e-15 Identity = 47/93 (50.54%), Postives = 55/93 (59.14%), Query Frame = 2 Query: 110 LALLKRGIGVHHPGLLPILNEVTDILFHEWMY*L*GXXXXXXXXSLNMPAGNGESPYVRTLDADDVIWISSGNYIHISGRAGRPGIDERGICI 388 L LL+RGIG+HH GLLPIL EV +ILF E + + LNMPA VR D WIS G YI +SGRAGR G+D+RGI I Sbjct: 513 LPLLRRGIGIHHSGLLPILKEVIEILFQEGLLKVL-FATETFSIGLNMPAKTVVFTNVRKFDGKTFRWISGGEYIQMSGRAGRRGLDDRGIVI 604
BLAST of EY725008 vs. ExPASy Swiss-Prot
Match: SK2L2_HUMAN (Superkiller viralicidic activity 2-like 2 OS=Homo sapiens GN=SKIV2L2 PE=1 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 4.745e-15 Identity = 47/93 (50.54%), Postives = 54/93 (58.06%), Query Frame = 2 Query: 110 LALLKRGIGVHHPGLLPILNEVTDILFHEWMY*L*GXXXXXXXXSLNMPAGNGESPYVRTLDADDVIWISSGNYIHISGRAGRPGIDERGICI 388 L LLKRGIG+HH GLLPIL E +ILF E + +NMPA R D D WISSG YI +SGRAGR G+D+RGI I Sbjct: 445 LPLLKRGIGIHHGGLLPILKETIEILFSEGLIKAL-FATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVI 536
BLAST of EY725008 vs. ExPASy Swiss-Prot
Match: SK2L2_MOUSE (Superkiller viralicidic activity 2-like 2 OS=Mus musculus GN=Skiv2l2 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.197e-15 Identity = 47/93 (50.54%), Postives = 54/93 (58.06%), Query Frame = 2 Query: 110 LALLKRGIGVHHPGLLPILNEVTDILFHEWMY*L*GXXXXXXXXSLNMPAGNGESPYVRTLDADDVIWISSGNYIHISGRAGRPGIDERGICI 388 L LLKRGIG+HH GLLPIL E +ILF E + +NMPA R D D WISSG YI +SGRAGR G+D+RGI I Sbjct: 443 LPLLKRGIGIHHGGLLPILKETIEILFSEGLIKAL-FATETFAMGINMPARTVLFTNARKYDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVI 534
BLAST of EY725008 vs. ExPASy Swiss-Prot
Match: MTR4_YEAST (ATP-dependent RNA helicase DOB1 OS=Saccharomyces cerevisiae GN=MTR4 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.197e-15 Identity = 46/93 (49.46%), Postives = 54/93 (58.06%), Query Frame = 2 Query: 110 LALLKRGIGVHHPGLLPILNEVTDILFHEWMY*L*GXXXXXXXXSLNMPAGNGESPYVRTLDADDVIWISSGNYIHISGRAGRPGIDERGICI 388 L LL+RGIG+HH GLLPIL EV +ILF E + LNMPA VR D W+S G YI +SGRAGR G+D+RGI I Sbjct: 465 LPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVL-FATETFSIGLNMPAKTVVFTSVRKWDGQQFRWVSGGEYIQMSGRAGRRGLDDRGIVI 556
BLAST of EY725008 vs. ExPASy Swiss-Prot
Match: MTR4_CAEEL (mRNA transport homolog 4 OS=Caenorhabditis elegans GN=mtr-4 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.204e-12 Identity = 43/96 (44.79%), Postives = 54/96 (56.25%), Query Frame = 2 Query: 101 IKYLALLKRGIGVHHPGLLPILNEVTDILFHEWMY*L*GXXXXXXXXSLNMPAGNGESPYVRTLDADDVIWISSGNYIHISGRAGRPGIDERGICI 388 + L LL+RGIGVHH GL+PIL E +ILF E + + LNMPA R D D +I+SG YI ++GRAGR G D+RG I Sbjct: 429 LNILPLLRRGIGVHHSGLMPILKETIEILFGEGLVKV-LFATETFSMGLNMPARTVVFTSARKFDGSDNRYITSGEYIQMAGRAGRRGKDDRGTVI 523
BLAST of EY725008 vs. ExPASy Swiss-Prot
Match: YE02_SCHPO (Uncharacterized helicase C17H9.02 OS=Schizosaccharomyces pombe GN=SPAC17H9.02 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.015e-12 Identity = 39/92 (42.39%), Postives = 54/92 (58.70%), Query Frame = 2 Query: 113 ALLKRGIGVHHPGLLPILNEVTDILFHEWMY*L*GXXXXXXXXSLNMPAGNGESPYVRTLDADDVIWISSGNYIHISGRAGRPGIDERGICI 388 +LL RGIG+HH GLLPIL E+ +ILF E + + LNMPA + ++ W++SG Y+ +SGRAGR GID +G+ I Sbjct: 430 SLLLRGIGIHHSGLLPILKELVEILFQEGLVRI-LFATETFSIGLNMPARTVLFTKAQKFSGNNFRWLTSGEYMQMSGRAGRRGIDTKGLSI 520 HSP 2 Score: 20.7866 bits (42), Expect = 3.015e-12 Identity = 10/25 (40.00%), Postives = 16/25 (64.00%), Query Frame = 1 Query: 460 NVYPLNYDMGESPIRCEXGSPEDLL 534 + + L+Y M + +R E SPED+L Sbjct: 545 SAFHLSYGMILNLMRIEEISPEDIL 569 The following BLAST results are available for this feature:
BLAST of EY725008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY725008 ID=EY725008; Name=EY725008; organism=Citrus sinensis; type=EST; length=871bpback to top |