FE659307

Overview
NameFE659307
Unique NameFE659307
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length290
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5965 contig Csv1_Contig5965:606..895. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FE659307 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 5.971e-48
Identity = 89/98 (90.82%), Postives = 92/98 (93.88%), Query Frame = 3
Query:    3 GEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPAT--KNNLRLDDWVLCRL 290
            GEKEWYFFS RDRKYPNGSRPNRAAG+GYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYR ANV RS +T  KNNLRLDDWVLCR+
Sbjct:  102 GEKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSASTNKKNNLRLDDWVLCRI 199          
BLAST of FE659307 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 1.626e-45
Identity = 82/96 (85.42%), Postives = 87/96 (90.62%), Query Frame = 3
Query:    3 GEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRL 290
            GEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKP+G PK + IKKALVFYAGKAPKG KTNWIMHEYR A+V RS   KN+LRLDDWVLCR+
Sbjct:   61 GEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGSPKPVAIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRI 156          
BLAST of FE659307 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 3.067e-44
Identity = 83/97 (85.57%), Postives = 88/97 (90.72%), Query Frame = 3
Query:    3 GEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRS-PATKNNLRLDDWVLCRL 290
            GEKEWYFFSPRDRKYPNGSRPNR+AGSGYWKATGADKPIG PK +GIKKALVFYAGKAPKG KTNWIMHEYR A+V RS    KN+LRLDDWVLCR+
Sbjct:   59 GEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIGLPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRI 155          
BLAST of FE659307 vs. ExPASy Swiss-Prot
Match: NAC71_ORYSJ (NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 1.683e-42
Identity = 78/103 (75.73%), Postives = 86/103 (83.50%), Query Frame = 3
Query:    3 GEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATK-------NNLRLDDWVLCRL 290
            GEKEWYFFSPRDRKYPNG RPNRAAG+GYWKATGADKP+G P+ + IKKALVFYAGK PKG+KTNWIMHEYR A+V RS A +       N LRLDDWVLCR+
Sbjct:   61 GEKEWYFFSPRDRKYPNGQRPNRAAGTGYWKATGADKPVGSPRAVAIKKALVFYAGKPPKGVKTNWIMHEYRLADVDRSAAARKLSKSSHNALRLDDWVLCRI 163          
BLAST of FE659307 vs. ExPASy Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 8.643e-39
Identity = 72/100 (72.00%), Postives = 85/100 (85.00%), Query Frame = 3
Query:    3 GEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPI---GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSP-ATKNNLRLDDWVLCRL 290
            G KEWYFF+PRDRKYPNGSRPNRAAG GYWKATGADKP+   G  +T+GIKKALVFY+GKAP+G+KT+WIMHEYR A+  R+P   K + +LD+WVLCRL
Sbjct:   73 GRKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRGVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRL 172          
BLAST of FE659307 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 2.354e-36
Identity = 70/106 (66.04%), Postives = 83/106 (78.30%), Query Frame = 3
Query:    3 GEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPI-----GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYR-----PANVHRSPATKNNLRLDDWVLCRL 290
            GE+EWYFFSPRDRKYPNG+RPNRAA SGYWKATG DKP+     G  K +G+KKALVFY+GK PKG+K++WIMHEYR     P ++      KN+LRLDDWVLCR+
Sbjct:   69 GEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRI 174          
BLAST of FE659307 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 8.944e-36
Identity = 72/97 (74.23%), Postives = 77/97 (79.38%), Query Frame = 3
Query:    3 GEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPI-GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRL 290
            GEKEWYFFSPRDRKYPNGSRPNR AGSGYWKATG DK I    + +GIKKALVFYAGKAPKG KTNWIMHEYR     RS  +    +LDDWVLCR+
Sbjct:   66 GEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFYAGKAPKGTKTNWIMHEYRLIEHSRSHGSS---KLDDWVLCRI 159          
BLAST of FE659307 vs. ExPASy Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 2.602e-35
Identity = 71/98 (72.45%), Postives = 79/98 (80.61%), Query Frame = 3
Query:    3 GEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-KPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKN-NLRLDDWVLCRL 290
            GEKEWYFFSPRDRKYPNGSRPNR AGSGYWKATG DK I  + + +GIKKALVFY GKAPKG KTNWIMHEYR       P+ +N + +LDDWVLCR+
Sbjct:   66 GEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFYIGKAPKGTKTNWIMHEYRLI----EPSRRNGSTKLDDWVLCRI 159          
BLAST of FE659307 vs. ExPASy Swiss-Prot
Match: NAC19_ARATH (NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 4.439e-35
Identity = 71/98 (72.45%), Postives = 79/98 (80.61%), Query Frame = 3
Query:    3 GEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-KPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKN-NLRLDDWVLCRL 290
            GEKEWYFFSPRDRKYPNGSRPNR AGSGYWKATG DK I  + + +GIKKALVFY GKAPKG KTNWIMHEYR       P+ +N + +LDDWVLCR+
Sbjct:   66 GEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLI----EPSRRNGSTKLDDWVLCRI 159          
BLAST of FE659307 vs. ExPASy Swiss-Prot
Match: NAC67_ORYSJ (NAC domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=NAC67 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 5.797e-35
Identity = 70/99 (70.71%), Postives = 77/99 (77.78%), Query Frame = 3
Query:    3 GEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPI-GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPAT--KNNLRLDDWVLCRL 290
            G +EWYFF+PRDRKYPNGSRPNRAA SGYWKATGADKP+    +T GIKKALVFY GK P+G+KT WIMHEYR A    + A      LRLDDWVLCRL
Sbjct:   69 GRREWYFFTPRDRKYPNGSRPNRAAASGYWKATGADKPVLHNGRTAGIKKALVFYHGKPPRGVKTEWIMHEYRLAKKGGAAAAAGAGALRLDDWVLCRL 167          
The following BLAST results are available for this feature:
BLAST of FE659307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
NA102_ARATH5.971e-4890.82NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC48_ORYSJ1.626e-4585.42NAC domain-containing protein 48 OS=Oryza sativa s... [more]
NAC2_ARATH3.067e-4485.57NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
NAC71_ORYSJ1.683e-4275.73NAC domain-containing protein 71 OS=Oryza sativa s... [more]
NAC68_ORYSJ8.643e-3972.00NAC domain-containing protein 68 OS=Oryza sativa s... [more]
NAC18_ARATH2.354e-3666.04NAC domain-containing protein 18 OS=Arabidopsis th... [more]
NAC72_ARATH8.944e-3674.23NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NAC55_ARATH2.602e-3572.45NAC domain-containing protein 55 OS=Arabidopsis th... [more]
NAC19_ARATH4.439e-3572.45NAC domain-containing protein 19 OS=Arabidopsis th... [more]
NAC67_ORYSJ5.797e-3570.71NAC domain-containing protein 67 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionA42 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659307 ID=FE659307; Name=FE659307; organism=Citrus sinensis; type=EST; length=290bp
ACGGCGAAAAGGAGTGGTATTTCTTTTCTCCAAGGGACAGGAAATATCCA
AACGGTTCAAGGCCGAACCGGGCGGCCGGATCCGGATACTGGAAGGCGAC
CGGAGCGGACAAGCCCATTGGGAAGCCGAAGACTCTTGGTATAAAAAAGG
CGCTTGTGTTCTACGCTGGAAAAGCGCCTAAAGGAATCAAAACTAATTGG
ATTATGCATGAATATCGCCCTGCTAATGTTCACAGATCCCCCGCCACCAA
AAACAACCTAAGGCTTGACGATTGGGTATTATGTCGATTG
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