FE659304

Overview
NameFE659304
Unique NameFE659304
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length196
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9927 contig Csv1_Contig9927:149..344. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FE659304 vs. ExPASy Swiss-Prot
Match: E1314_ARATH (Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500/F10A12.18 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.775e-13
Identity = 40/64 (62.50%), Postives = 44/64 (68.75%), Query Frame = 2 
Query:    5 RIQGLPGVGINYGQIANNXXXXXXXXXXXXXXNISRVKLYDTDPVVLSAFSNSNVDFIIGLGNE 196
            RI+G  GVGINYGQIANN              NI+RVKLYD DP VL +FSNS VDF+IGLGNE
Sbjct:   23 RIKG-QGVGINYGQIANNLPSPARVAVLLRSLNITRVKLYDADPNVLFSFSNSQVDFMIGLGNE 85
The following BLAST results are available for this feature:
BLAST of FE659304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
E1314_ARATH2.775e-1362.50Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis... [more]
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Properties
Property NameValue
Genbank descriptionA36 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659304 ID=FE659304; Name=FE659304; organism=Citrus sinensis; type=EST; length=196bp
ACCCAGAATCCAAGGCCTTCCAGGAGTTGGAATTAACTATGGCCAGATAG
CAAACAATCTGCCATCCCCATCCCGTGTCTCGGTCCTCTTAAGATCTCTC
AACATCAGCAGAGTTAAACTCTACGACACAGATCCCGTCGTCCTCTCGGC
ATTCTCCAACAGTAACGTAGACTTCATCATTGGCCTAGGCAACGAG
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