FE659300
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FE659300 vs. ExPASy Swiss-Prot
Match: C3H29_ARATH (Zinc finger CCCH domain-containing protein 29 OS=Arabidopsis thaliana GN=At2g40140 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.897e-19 Identity = 52/108 (48.15%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 26 VSNPPTIRSSNLSDWSSPDGKLDWGVQGDELNKLKKSASFGFRSNNLTTPTTKGFTPSSSNVDEPDVSWVNSLVKDVTPE------GQGLFGA---EKQQYNPWMEQM 322 +S P +SN+SDW SP+GKL+WG+Q DELNKL++SASFG NN + + P+ DEPDVSWVNSLVK+ PE G + GA +K + W EQM Sbjct: 484 LSFKPAPVASNVSDWGSPNGKLEWGMQRDELNKLRRSASFGIHGNNNNSVS----RPARDYSDEPDVSWVNSLVKENAPERVNERVGNTVNGAASRDKFKLPSWAEQM 587
BLAST of FE659300 vs. ExPASy Swiss-Prot
Match: C3H47_ARATH (Zinc finger CCCH domain-containing protein 47 OS=Arabidopsis thaliana GN=At3g55980 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.912e-18 Identity = 46/91 (50.55%), Postives = 58/91 (63.74%), Query Frame = 2 Query: 53 SNLSDWSSPDGKLDWGVQGDELNKLKKSASFGFRSNNLTTPTTKGFTPSSSNVDEPDVSWVNSLVKDVTPEGQGLFGA-EKQQYNPWMEQM 322 SNLSDW SP+GKL+WG++G+ELNK+++S SFG NN + DEPDVSWVNSLVKD T + FG E+ + W EQM Sbjct: 488 SNLSDWGSPNGKLEWGMKGEELNKMRRSVSFGIHGNN-------NNNAARDYRDEPDVSWVNSLVKDSTVVSERSFGMNERVRIMSWAEQM 571
BLAST of FE659300 vs. ExPASy Swiss-Prot
Match: C3H33_ORYSJ (Zinc finger CCCH domain-containing protein 33 OS=Oryza sativa subsp. japonica GN=Os05g0128200 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.438e-17 Identity = 47/81 (58.02%), Postives = 53/81 (65.43%), Query Frame = 2 Query: 11 AGLSMVSNPPTIRSSNLSDWSSPDGKLDWGVQGDELNKLKKSASFGFRSNNLTTPTTKGFTPSSSNVDEPDVSWVNSLVKD 253 A S++S T S LSDW SPDGKLDWGVQGDEL+KL+KSASF FR + T + EPDVSWVNSLVKD Sbjct: 508 AARSLMSPATTGAPSILSDWGSPDGKLDWGVQGDELHKLRKSASFAFRGQSAMPVAT------HAAAAEPDVSWVNSLVKD 582
BLAST of FE659300 vs. ExPASy Swiss-Prot
Match: C3H66_ARATH (Zinc finger CCCH domain-containing protein 66 OS=Arabidopsis thaliana GN=At5g58620 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.870e-12 Identity = 39/87 (44.83%), Postives = 50/87 (57.47%), Query Frame = 2 Query: 59 LSDWSSPDGKLDWGVQGDELNKLKKSASFGFRSNNLTTPTTKGFTPSSSNVDEPDVSWVNSLVKDVTPEGQGLFGAEKQQYNPWMEQ 319 L+DW S DGKLDW VQGDEL KL+KS SF R+ + + + ++EPDVSWV LVK+ P+ E + WMEQ Sbjct: 524 LNDWGSLDGKLDWSVQGDELQKLRKSTSFRLRAGGMESRLPN----EGTGLEEPDVSWVEPLVKE--PQ-------ETRLAPVWMEQ 597 The following BLAST results are available for this feature:
BLAST of FE659300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FE659300 ID=FE659300; Name=FE659300; organism=Citrus sinensis; type=EST; length=322bpback to top |