FE659295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FE659295 vs. ExPASy Swiss-Prot
Match: MEP1_SOYBN (Metalloendoproteinase 1 OS=Glycine max PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 5.422e-17 Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 3 Query: 3 AFLPDNQLTDEVKNVFATAFDRWSEATSLTFTRTDVYTTADIRIGFFTGDHGDGEPFDGPMGTLAHALSPPNGRFHLDGDENWV 254 AF P+ +L D K+ A AF +W+ ++ F T Y TA+I+I F + +HGD PFDGP G L HA +P +GR H D DE WV Sbjct: 153 AFSPEPRLDDTFKSAIARAFSKWTPVVNIAFQETTSYETANIKILFASKNHGDPYPFDGPGGILGHAFAPTDGRCHFDADEYWV 236
BLAST of FE659295 vs. ExPASy Swiss-Prot
Match: MMP13_MOUSE (Collagenase 3 OS=Mus musculus GN=Mmp13 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.785e-13 Identity = 43/81 (53.09%), Postives = 48/81 (59.26%), Query Frame = 3 Query: 33 EVKNVFATAFDRWSEATSLTFTRTDVYT-TADIRIGFFTGDHGDGEPFDGPMGTLAHALSP-PN--GRFHLDGDENWVITS 263 EV+ F AF WS+ T L FTR +Y TADI I F T +HGD PFDGP G LAHA P PN G H D DE W +S Sbjct: 134 EVEKAFRKAFKVWSDVTPLNFTR--IYDGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWTSSS 212
BLAST of FE659295 vs. ExPASy Swiss-Prot
Match: MMP13_HORSE (Collagenase 3 OS=Equus caballus GN=MMP13 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.637e-13 Identity = 43/81 (53.09%), Postives = 48/81 (59.26%), Query Frame = 3 Query: 33 EVKNVFATAFDRWSEATSLTFTRTDVYT-TADIRIGFFTGDHGDGEPFDGPMGTLAHALSP-PN--GRFHLDGDENWVITS 263 EV+ F AF WS+ T L FTR +Y TADI I F T +HGD PFDGP G LAHA P PN G H D DE W +S Sbjct: 134 EVEKAFKKAFKVWSDVTPLNFTR--LYNGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWTSSS 212
BLAST of FE659295 vs. ExPASy Swiss-Prot
Match: MMP13_RABIT (Collagenase 3 OS=Oryctolagus cuniculus GN=MMP13 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.750e-13 Identity = 42/80 (52.50%), Postives = 46/80 (57.50%), Query Frame = 3 Query: 33 EVKNVFATAFDRWSEATSLTFTRTDVYTTADIRIGFFTGDHGDGEPFDGPMGTLAHALSP-PN--GRFHLDGDENWVITS 263 EV+ F AF WS+ T L FTR TADI I F T +HGD PFDGP G LAHA P PN G H D DE W +S Sbjct: 133 EVEKAFKKAFKVWSDVTPLNFTRIH-NGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWTSSS 211
BLAST of FE659295 vs. ExPASy Swiss-Prot
Match: MMP13_BOVIN (Collagenase 3 OS=Bos taurus GN=MMP13 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.750e-13 Identity = 42/80 (52.50%), Postives = 46/80 (57.50%), Query Frame = 3 Query: 33 EVKNVFATAFDRWSEATSLTFTRTDVYTTADIRIGFFTGDHGDGEPFDGPMGTLAHALSP-PN--GRFHLDGDENWVITS 263 EV+ F AF WS+ T L FTR TADI I F T +HGD PFDGP G LAHA P PN G H D DE W +S Sbjct: 133 EVEKAFRKAFKVWSDVTPLNFTRIH-NGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWTSSS 211
BLAST of FE659295 vs. ExPASy Swiss-Prot
Match: MMP13_RAT (Collagenase 3 (Fragment) OS=Rattus norvegicus GN=Mmp13 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.204e-13 Identity = 42/80 (52.50%), Postives = 46/80 (57.50%), Query Frame = 3 Query: 33 EVKNVFATAFDRWSEATSLTFTRTDVYTTADIRIGFFTGDHGDGEPFDGPMGTLAHALSP-PN--GRFHLDGDENWVITS 263 EV+ F AF WS+ T L FTR TADI I F T +HGD PFDGP G LAHA P PN G H D DE W +S Sbjct: 128 EVEKAFRKAFKVWSDVTPLNFTRIHD-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNLGGDAHFDDDETWTSSS 206
BLAST of FE659295 vs. ExPASy Swiss-Prot
Match: MMP18_XENLA (Matrix metalloproteinase-18 OS=Xenopus laevis GN=mmp18 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.382e-12 Identity = 43/90 (47.78%), Postives = 47/90 (52.22%), Query Frame = 3 Query: 6 FLPDNQLTDEVKNVFATAFDRWSEATSLTFTRTDVYT-TADIRIGFFTGDHGDGEPFDGPMGTLAHALSPPN---GRFHLDGDENWVITS 263 F PD D V+ AF WS+ T LTFTR +Y +DI I F GDH D PFDG G LAHA P N G H D DE W TS Sbjct: 121 FTPDLPQAD-VETAIQRAFKVWSDVTPLTFTR--IYNEVSDIEISFTAGDHKDNSPFDGSGGILAHAFQPGNGIGGDAHFDEDETWTKTS 207
BLAST of FE659295 vs. ExPASy Swiss-Prot
Match: MMP8_HUMAN (Neutrophil collagenase OS=Homo sapiens GN=MMP8 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.805e-12 Identity = 38/80 (47.50%), Postives = 43/80 (53.75%), Query Frame = 3 Query: 33 EVKNVFATAFDRWSEATSLTFTRTDVYTTADIRIGFFTGDHGDGEPFDGPMGTLAHALSPP---NGRFHLDGDENWVITS 263 EV+ AF+ WS A+ L FTR ADI I F+ DHGD PFDGP G LAHA P G H D +E W TS Sbjct: 128 EVERAIKDAFELWSVASPLIFTRIS-QGEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWTNTS 206
BLAST of FE659295 vs. ExPASy Swiss-Prot
Match: MMP28_HUMAN (Matrix metalloproteinase-28 OS=Homo sapiens GN=MMP28 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 4.021e-12 Identity = 35/85 (41.18%), Postives = 43/85 (50.59%), Query Frame = 3 Query: 12 PDNQLTDEVKNVFATAFDRWSEATSLTFTRTDVYTTADIRIGFFTGDHGDG--EPFDGPMGTLAHALSPPNGRFHLDGDENWVIT 260 P++ V+ AF WS ++L F ADIR+ FF GDH DG FDGP G LAHA P G H D DE W ++ Sbjct: 143 PEHLPEPAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDGPGGALAHAFLPRRGEAHFDQDERWSLS 227
BLAST of FE659295 vs. ExPASy Swiss-Prot
Match: MMP20_PIG (Matrix metalloproteinase-20 OS=Sus scrofa GN=MMP20 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.252e-12 Identity = 37/78 (47.44%), Postives = 41/78 (52.56%), Query Frame = 3 Query: 33 EVKNVFATAFDRWSEATSLTFTRTDVYTTADIRIGFFTGDHGDGEPFDGPMGTLAHALSPP---NGRFHLDGDENWVI 257 EV A WS A L+F R + ADI I F TGDHGD PFDGP GTLAHA +P G H D E W + Sbjct: 137 EVDKAMEMALQAWSSAVPLSFVRVNA-GEADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTM 213 The following BLAST results are available for this feature:
BLAST of FE659295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >FE659295 ID=FE659295; Name=FE659295; organism=Citrus sinensis; type=EST; length=265bpback to top |