FE659273

Overview
NameFE659273
Unique NameFE659273
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length291
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13679 contig Csv1_Contig13679:1..291. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FE659273 vs. ExPASy Swiss-Prot
Match: SEC3A_ARATH (Exocyst complex component SEC3A OS=Arabidopsis thaliana GN=SEC3A PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 1.626e-45
Identity = 91/96 (94.79%), Postives = 91/96 (94.79%), Query Frame = 2 
Query:    2 RQMGVLSYIPRFTTLATRMEQYIQGQSRDLVDQAYTKFVSIMFVTLEKIAQTDPKYADIFLLENYAAFQNSLYDLANVVPTLAKFYHQASEAYEQA 289
            RQMGVL YIPRF  LATRMEQYIQGQSRDLVDQAYTKFVSIMFVTLEKIAQ DPKYADI LLENYAAFQNSLYDLANVVPTLAKFYHQASEAYEQA
Sbjct:  670 RQMGVLPYIPRFAALATRMEQYIQGQSRDLVDQAYTKFVSIMFVTLEKIAQQDPKYADILLLENYAAFQNSLYDLANVVPTLAKFYHQASEAYEQA 765
[Close]
BLAST of FE659273 vs. ExPASy Swiss-Prot
Match: SEC3B_ARATH (Exocyst complex component SEC3B OS=Arabidopsis thaliana GN=SEC3B PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 3.174e-41
Identity = 84/96 (87.50%), Postives = 87/96 (90.62%), Query Frame = 2 
Query:    2 RQMGVLSYIPRFTTLATRMEQYIQGQSRDLVDQAYTKFVSIMFVTLEKIAQTDPKYADIFLLENYAAFQNSLYDLANVVPTLAKFYHQASEAYEQA 289
            RQMGVL YIPRF  LATRMEQYIQGQSR+LVDQAYTKFVSI+FVTLEKIAQ DPKYADI LLENYAAFQ  L+DLANVVPTLAKFY QA EAYEQA
Sbjct:  670 RQMGVLPYIPRFAALATRMEQYIQGQSRNLVDQAYTKFVSILFVTLEKIAQQDPKYADILLLENYAAFQTCLFDLANVVPTLAKFYDQAMEAYEQA 765
The following BLAST results are available for this feature:
BLAST of FE659273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
SEC3A_ARATH1.626e-4594.79Exocyst complex component SEC3A OS=Arabidopsis tha... [more]
SEC3B_ARATH3.174e-4187.50Exocyst complex component SEC3B OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank description428 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659273 ID=FE659273; Name=FE659273; organism=Citrus sinensis; type=EST; length=291bp
ACGGCAGATGGGCGTCTTATCATACATCCCAAGATTTACAACTCTTGCTA
CCCGAATGGAGCAGTATATTCAGGGACAATCTAGGGATTTGGTTGATCAG
GCATACACAAAATTTGTTAGCATAATGTTTGTGACTTTGGAGAAAATTGC
ACAAACAGATCCAAAATATGCTGATATTTTTCTTTTAGAGAACTACGCAG
CATTTCAGAATAGCTTATATGACCTAGCAAATGTTGTGCCCACTCTAGCC
AAATTTTATCACCAGGCAAGCGAAGCTTATGAACAGGCTTG
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