FE659239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FE659239 vs. ExPASy Swiss-Prot
Match: GAE1_ARATH (UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana GN=GAE1 PE=1 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 2.609e-56 Identity = 102/121 (84.30%), Postives = 116/121 (95.87%), Query Frame = 3 Query: 6 SASWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHS 368 +ASWGGIQWEK VR+SAQIHRSGG+SVLVTGA GFVG+HVSLAL+KRGDGVVGLDNFNNYYDPSLK+AR++LL++ GIFV+EGD+NDAKLLAKLFD VAFTHVMHLAAQAGVRYA++NP S Sbjct: 64 TASWGGIQWEKQVRTSAQIHRSGGISVLVTGATGFVGSHVSLALRKRGDGVVGLDNFNNYYDPSLKRARRSLLSSRGIFVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQS 184
BLAST of FE659239 vs. ExPASy Swiss-Prot
Match: GAE3_ARATH (UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana GN=GAE3 PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 5.825e-48 Identity = 91/119 (76.47%), Postives = 102/119 (85.71%), Query Frame = 3 Query: 12 SWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHS 368 SWGG WEK VRSSA++ G SVLVTGAAGFVGTHVS ALK+RGDGV+GLDNFN+YYDPSLK+AR+ALL G+FV+EGDINDA LL KLF+ V FTHVMHLAAQAGVRYAM+NP S Sbjct: 69 SWGGPAWEKRVRSSARLRTRRGFSVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKRARQALLERSGVFVVEGDINDAALLKKLFEVVPFTHVMHLAAQAGVRYAMENPSS 187
BLAST of FE659239 vs. ExPASy Swiss-Prot
Match: GAE2_ARATH (UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana GN=GAE2 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 1.874e-46 Identity = 87/119 (73.11%), Postives = 101/119 (84.87%), Query Frame = 3 Query: 12 SWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHS 368 SWGG WEK VRSSA++ G+SVLVTGAAGFVGTHVS ALK+RGDGV+GLDNFN+YYD SLK++R+ALL G+F++EGDIND LL KLF+ V FTHVMHLAAQAGVRYAM+NP S Sbjct: 70 SWGGPAWEKRVRSSARVRTRNGVSVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDTSLKRSRQALLERSGVFIVEGDINDLSLLKKLFEVVPFTHVMHLAAQAGVRYAMENPGS 188
BLAST of FE659239 vs. ExPASy Swiss-Prot
Match: GAE5_ARATH (UDP-glucuronate 4-epimerase 5 OS=Arabidopsis thaliana GN=GAE5 PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 3.196e-46 Identity = 87/121 (71.90%), Postives = 101/121 (83.47%), Query Frame = 3 Query: 6 SASWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHS 368 +A +GG WEK VR SA+ GG++VLVTGA+GFVGTHVS+AL++RGDGV+GLDNFN YYDP LK+AR+ LL G+FV+EGDINDA LL KLFD V FTHVMHLAAQAGVRYAMQNP S Sbjct: 72 AAKYGGSHWEKQVRKSARPRSHGGLTVLVTGASGFVGTHVSIALRRRGDGVLGLDNFNRYYDPKLKRARQGLLERSGVFVVEGDINDAVLLRKLFDVVLFTHVMHLAAQAGVRYAMQNPGS 192
BLAST of FE659239 vs. ExPASy Swiss-Prot
Match: GAE4_ARATH (UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana GN=GAE4 PE=1 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 2.072e-45 Identity = 88/121 (72.73%), Postives = 104/121 (85.95%), Query Frame = 3 Query: 12 SWGGIQWEKHVRSSAQIHRS--GGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHS 368 ++GG WEK +RSSA+I S G++VLVTGAAGFVGTHVS ALK+RGDGV+GLDNFN+YYDPSLK+AR+ALL GIF++EGDIND +LL KLF V+FTHVMHLAAQAGVRYAM+NP S Sbjct: 73 TYGGPAWEKRLRSSARIRTSTNNGITVLVTGAAGFVGTHVSAALKRRGDGVIGLDNFNDYYDPSLKRARRALLERSGIFIVEGDINDVELLRKLFKIVSFTHVMHLAAQAGVRYAMENPSS 193
BLAST of FE659239 vs. ExPASy Swiss-Prot
Match: GAE6_ARATH (UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thaliana GN=GAE6 PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.939e-43 Identity = 82/121 (67.77%), Postives = 98/121 (80.99%), Query Frame = 3 Query: 6 SASWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHS 368 S+S GG WEK VR S+ R G+SVLVTGAAGFVG+H SLAL+KRGDGV+G DNFN+YYDPSLK+AR+ LL +F++EGD+ND LL KLFD V FTH++HLAAQAGVRYAM+NP S Sbjct: 88 SSSIGGAAWEKRVRQSSTAKRPHGLSVLVTGAAGFVGSHCSLALRKRGDGVLGFDNFNDYYDPSLKRARQELLEKQQVFIVEGDLNDGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQS 208
BLAST of FE659239 vs. ExPASy Swiss-Prot
Match: YCL2_ECO11 (Uncharacterized 37.6 kDa protein in cld 5'region OS=Escherichia coli O111:H- PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.234e-15 Identity = 44/97 (45.36%), Postives = 59/97 (60.82%), Query Frame = 3 Query: 78 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHS 368 M LVTGAAGF+G HVS L + G VVG+DN N+YYD SLK+AR LL G + D+ D + + LF + F V + VRY+++NPH+ Sbjct: 1 MKYLVTGAAGFIGFHVSKRLLEAGHQVVGIDNLNDYYDVSLKQARLELLAQPGFQFHKIDLADREGMTDLFASGHFERVFISPHRLAVRYSLENPHA 97
BLAST of FE659239 vs. ExPASy Swiss-Prot
Match: Y1055_METJA (Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii GN=MJ1055 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.187e-14 Identity = 41/97 (42.27%), Postives = 61/97 (62.89%), Query Frame = 3 Query: 81 SVLVTGAAGFVGTHVSLALKKRGDG--VVGLDNFNNYYDPSLKKARKALLNNHGIFV-IEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNP 362 ++LVTG+AGF+G H+S L + V+G+DN NNYY+P LK+ R +L N+ + I+ D +D L + ++HL AQAGVRY++QNP Sbjct: 5 NILVTGSAGFIGFHLSKYLMDNYEDLKVIGIDNLNNYYNPVLKEKRNEILKNYENYTFIKLDFSDWDDLVENLKDKEIDLIVHLGAQAGVRYSLQNP 101
BLAST of FE659239 vs. ExPASy Swiss-Prot
Match: LPSL_RHIME (UDP-glucuronate 5'-epimerase OS=Rhizobium meliloti GN=lspL PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 3.567e-13 Identity = 39/96 (40.62%), Postives = 56/96 (58.33%), Query Frame = 3 Query: 78 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALL-NNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNP 362 M L+TG AGF+G HV+ L G VVG D YYD +LK+ R A+L ++G + + D L + + ++HLAAQAGVRY+++NP Sbjct: 1 MRYLITGTAGFIGFHVAKRLIDEGHFVVGFDGMTPYYDVTLKERRHAILQRSNGFKAVTAMLEDRAALDRAAELAEPEVIIHLAAQAGVRYSLENP 96
BLAST of FE659239 vs. ExPASy Swiss-Prot
Match: CAPI_STAAU (Protein capI OS=Staphylococcus aureus GN=capI PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.084e-13 Identity = 37/97 (38.14%), Postives = 61/97 (62.89%), Query Frame = 3 Query: 78 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHS 368 M +L+TG AGF+G+H++ L K+G V+G+D+ N+YY SLK+ R + + + + L+K+F V++LAAQAGVRY+++NP + Sbjct: 1 MKILITGTAGFIGSHLAKKLIKQGHYVIGVDSINDYYSVSLKEDRLKSIGKENFTFNKVKLENYDDLSKVFVDEQPEVVVNLAAQAGVRYSIENPRT 97 The following BLAST results are available for this feature:
BLAST of FE659239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FE659239 ID=FE659239; Name=FE659239; organism=Citrus sinensis; type=EST; length=368bpback to top |