FE659235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FE659235 vs. ExPASy Swiss-Prot
Match: RS173_ARATH (40S ribosomal protein S17-3 OS=Arabidopsis thaliana GN=RPS17C PE=2 SV=3) HSP 1 Score: 197.978 bits (502), Expect = 1.273e-50 Identity = 98/117 (83.76%), Postives = 107/117 (91.45%), Query Frame = 3 Query: 3 YSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGVSLKLQEEERERRMDFVPDESATKTDEIKVDKETLDMLAALGMSDISGLVEVEPQSMITPPVFGRGGGR 353 YSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRG+SLKLQEEERERRMDFVPDESA K D++KVDKETL+MLA+LGMSDI+G+ +VE Q + P VFGR GR Sbjct: 21 YSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKIDDVKVDKETLEMLASLGMSDIAGISQVETQQAMAPAVFGRPAGR 137
BLAST of FE659235 vs. ExPASy Swiss-Prot
Match: RS17_SOLLC (40S ribosomal protein S17 OS=Solanum lycopersicum GN=RPS17 PE=2 SV=3) HSP 1 Score: 193.741 bits (491), Expect = 2.401e-49 Identity = 98/118 (83.05%), Postives = 108/118 (91.53%), Query Frame = 3 Query: 3 YSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGVSLKLQEEERERRMDFVPDESATKTDEIKVDKETLDMLAALGMSDISGLVE--VEPQSMITPPVFGRGGG 350 YS+MTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRG+SLKLQEEERERRMDFVPDESA KTD I+VDKETLDML+ALGMSD+ G+V+ EPQ++ P +GRGGG Sbjct: 21 YSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETLDMLSALGMSDLPGVVKQAAEPQAVAALPSYGRGGG 138
BLAST of FE659235 vs. ExPASy Swiss-Prot
Match: RS174_ARATH (40S ribosomal protein S17-4 OS=Arabidopsis thaliana GN=RPS17D PE=2 SV=3) HSP 1 Score: 193.356 bits (490), Expect = 3.136e-49 Identity = 99/117 (84.62%), Postives = 105/117 (89.74%), Query Frame = 3 Query: 3 YSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGVSLKLQEEERERRMDFVPDESATKTDEIKVDKETLDMLAALGMSDISGLVEVEPQSMITPPVFGRGGGR 353 YSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRG+SLKLQEEERERRMDFVPDESA KTDEIKVDKETL+MLA+LGMSD G+ VEPQ + P+ GGGR Sbjct: 21 YSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTPGISAVEPQQAMA-PIAAFGGGR 136
BLAST of FE659235 vs. ExPASy Swiss-Prot
Match: RS172_ARATH (40S ribosomal protein S17-2 OS=Arabidopsis thaliana GN=RPS17B PE=2 SV=3) HSP 1 Score: 192.971 bits (489), Expect = 4.095e-49 Identity = 100/119 (84.03%), Postives = 105/119 (88.24%), Query Frame = 3 Query: 3 YSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGVSLKLQEEERERRMDFVPDESATKTDEIKVDKETLDMLAALGMSDISGLVEVEPQSMITP-PVFGRGGGRR 356 YSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRG+SLKLQEEERERRMDFVPDESA KTDEIKVDKETL+MLA+LGMSD SG+ VEPQ + P FG RR Sbjct: 21 YSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTSGISAVEPQQAMAPIAAFGGRAPRR 139
BLAST of FE659235 vs. ExPASy Swiss-Prot
Match: RS171_ARATH (40S ribosomal protein S17-1 OS=Arabidopsis thaliana GN=RPS17A PE=1 SV=3) HSP 1 Score: 192.971 bits (489), Expect = 4.095e-49 Identity = 99/119 (83.19%), Postives = 105/119 (88.24%), Query Frame = 3 Query: 3 YSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGVSLKLQEEERERRMDFVPDESATKTDEIKVDKETLDMLAALGMSDISGLVEVEPQSMITP-PVFGRGGGRR 356 YSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRG+SLKLQEEERERRMDFVPDESA KTDEIKVDKETL+MLA+LGMSD G+ V+PQ + P P FG G R Sbjct: 21 YSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTLGISAVDPQQAMAPIPAFGGGRAPR 139
BLAST of FE659235 vs. ExPASy Swiss-Prot
Match: RS17B_SCHPO (40S ribosomal protein S17-B OS=Schizosaccharomyces pombe GN=rps17b PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.911e-30 Identity = 64/98 (65.31%), Postives = 80/98 (81.63%), Query Frame = 3 Query: 3 YSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGVSLKLQEEERERRMDFVPDESATKTDEIKVDKETLDMLAALGMSDISGLV 296 Y R+TLDF TNK+I++EVAII SKRLRNKIAG++THLMKRIQ+GPVRG+S KLQEEERER+ +VP+ S + D+I VD++T DML ALG I +V Sbjct: 21 YPRLTLDFQTNKRIVDEVAIIASKRLRNKIAGYTTHLMKRIQRGPVRGISFKLQEEERERKDQYVPEVSELEKDKINVDQDTKDMLKALGYDSIPTVV 118
BLAST of FE659235 vs. ExPASy Swiss-Prot
Match: RS17A_SCHPO (40S ribosomal protein S17-A OS=Schizosaccharomyces pombe GN=rps17a PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 9.485e-30 Identity = 61/94 (64.89%), Postives = 77/94 (81.91%), Query Frame = 3 Query: 3 YSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGVSLKLQEEERERRMDFVPDESATKTDEIKVDKETLDMLAALGMSDI 284 Y R+TLDF TNK+I++EVAII SKRLRNKIAG++THLMKRIQ+GPVRG+S KLQEEERER+ +VP+ S + D + VD++T DML +LG I Sbjct: 21 YPRLTLDFQTNKRIVDEVAIIASKRLRNKIAGYTTHLMKRIQRGPVRGISFKLQEEERERKDQYVPEVSELEVDRVNVDQDTKDMLKSLGYDQI 114
BLAST of FE659235 vs. ExPASy Swiss-Prot
Match: RS17_BOVIN (40S ribosomal protein S17 OS=Bos taurus GN=RPS17 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.618e-29 Identity = 61/102 (59.80%), Postives = 80/102 (78.43%), Query Frame = 3 Query: 3 YSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGVSLKLQEEERERRMDFVPDESATKTDEIKVDKETLDMLAALGMSDISGLVEVEP 308 Y+R+ DFHTNK++ EE+AIIPSK+LRNKIAG+ THLMKRIQ+GPVRG+S+KLQEEERERR ++VP+ SA + I+VD +T +ML L +S L +P Sbjct: 21 YTRLDNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
BLAST of FE659235 vs. ExPASy Swiss-Prot
Match: RS17_THEPA (40S ribosomal protein S17 OS=Theileria parva GN=RPS17 PE=3 SV=3) HSP 1 Score: 127.487 bits (319), Expect = 2.113e-29 Identity = 60/92 (65.22%), Postives = 77/92 (83.70%), Query Frame = 3 Query: 3 YSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGVSLKLQEEERERRMDFVPDESATKTDEIKVDKETLDMLAALGMS 278 Y ++ LDF NKK+ EEVA+IPSKR+RNK+AGF THLM+RIQKGPVRG+SLKLQEEERERRMD++P++S + I+VD++T DML L +S Sbjct: 21 YGKLGLDFQYNKKVAEEVALIPSKRMRNKVAGFITHLMRRIQKGPVRGISLKLQEEERERRMDYIPEKSELEVPVIQVDQDTADMLNFLKIS 112
BLAST of FE659235 vs. ExPASy Swiss-Prot
Match: RS17_THEAN (40S ribosomal protein S17 OS=Theileria annulata GN=RPS17 PE=2 SV=3) HSP 1 Score: 127.487 bits (319), Expect = 2.113e-29 Identity = 60/92 (65.22%), Postives = 77/92 (83.70%), Query Frame = 3 Query: 3 YSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGVSLKLQEEERERRMDFVPDESATKTDEIKVDKETLDMLAALGMS 278 Y ++ LDF NKK+ EEVA+IPSKR+RNK+AGF THLM+RIQKGPVRG+SLKLQEEERERRMD++P++S + I+VD++T DML L +S Sbjct: 21 YGKLGLDFQYNKKVAEEVALIPSKRMRNKVAGFITHLMRRIQKGPVRGISLKLQEEERERRMDYIPEKSELEVPVIQVDQDTADMLNFLKIS 112 The following BLAST results are available for this feature:
BLAST of FE659235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FE659235 ID=FE659235; Name=FE659235; organism=Citrus sinensis; type=EST; length=356bpback to top |