FE659217

Overview
NameFE659217
Unique NameFE659217
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length470
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659217 vs. ExPASy Swiss-Prot
Match: AB34G_ARATH (ABC transporter G family member 34 OS=Arabidopsis thaliana GN=ABCG34 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 3.377e-54
Identity = 97/156 (62.18%), Postives = 116/156 (74.36%), Query Frame = -2
Query:    2 SQPFFTQFKASFWKQYWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTL 469
            +QPF TQ KA FWK YWS WR PQYNAIRFLMT  I + FGLLFW  G K  ++QDL N  GAMY+  LFLG TNA +  P + +ERTV+YRE+AAGM+SA+ YA+ QVAVEI+Y T QT +Y LILYSMIG+ W + KFF F+Y+M   FV FTL
Sbjct: 1172 AQPFSTQTKACFWKMYWSNWRYPQYNAIRFLMTVVIGVLFGLLFWQTGTKIEKEQDLNNFFGAMYAAVLFLGATNAATVQPAVAIERTVFYREKAAGMYSAIPYAISQVAVEIMYNTIQTGVYTLILYSMIGYDWTVVKFFWFYYYMLTCFVYFTL 1327          
BLAST of FE659217 vs. ExPASy Swiss-Prot
Match: AB39G_ARATH (ABC transporter G family member 39 OS=Arabidopsis thaliana GN=ABCG39 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 4.411e-54
Identity = 96/156 (61.54%), Postives = 116/156 (74.36%), Query Frame = -2
Query:    2 SQPFFTQFKASFWKQYWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTL 469
            +Q F TQ KA FWKQYWSYWR+PQYNAIRFLMT  I + FGL+FW  G K+  +QDL N  GAMY+  LFLG  NA +  P I +ERTV+YRE+AAGM+SA+ YA+ QVAVEI+Y T QT +Y LILYSMIG  W + KF  F+Y+M  SF+ FTL
Sbjct: 1173 AQSFSTQTKACFWKQYWSYWRHPQYNAIRFLMTVVIGVLFGLIFWQIGTKTENEQDLNNFFGAMYAAVLFLGALNAATVQPAIAIERTVFYREKAAGMYSAIPYAISQVAVEIMYNTIQTGVYTLILYSMIGCNWTMAKFLWFYYYMLTSFIYFTL 1328          
BLAST of FE659217 vs. ExPASy Swiss-Prot
Match: PDR2_NICPL (Pleiotropic drug resistance protein 2 OS=Nicotiana plumbaginifolia GN=PDR2 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 5.392e-52
Identity = 93/156 (59.62%), Postives = 116/156 (74.36%), Query Frame = -2
Query:    2 SQPFFTQFKASFWKQYWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTL 469
            SQ F TQ KA FWKQ+WSYWRN QYNAIRF MT  I I FG++FW+KG +  RQQDL NLLGA Y+  +FLG TNA +   V+ +ERTV+YRERAAGM+S L YA  QVA+E IYV  QT +Y L+L+SMIG++W   KFF F+YF++  F  F++
Sbjct: 1179 SQSFITQCKACFWKQHWSYWRNSQYNAIRFFMTVIIGILFGVIFWNKGNQIHRQQDLLNLLGATYAAVMFLGATNASAVQSVVAIERTVFYRERAAGMYSELPYAFAQVAIETIYVAIQTFVYSLLLFSMIGYQWTAVKFFYFYYFIFMCFTYFSM 1334          
BLAST of FE659217 vs. ExPASy Swiss-Prot
Match: PDR1_TOBAC (Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 8.608e-50
Identity = 86/155 (55.48%), Postives = 116/155 (74.84%), Query Frame = -2
Query:    5 SQPFFTQFKASFWKQYWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFT 469
            SQ F+TQ  A  WKQ+WSYWRNP Y A+RF+ T  IA+ FG +FWD G K S+ QDL N +G+MY+  LFLG  NA S  PV+ +ERTV+YRERAAGM+SA+ YA GQV++EI Y+  Q+V Y +I+Y+MIGF+W++GKFF + + M+ + + FT
Sbjct: 1157 SQSFWTQCVACLWKQHWSYWRNPAYTAVRFIFTTFIALIFGTMFWDLGTKVSKSQDLLNAMGSMYAAVLFLGVQNASSVQPVVAIERTVFYRERAAGMYSAIPYAFGQVSIEIPYIFVQSVFYGIIVYAMIGFEWDVGKFFWYLFIMFFTLLYFT 1311          
BLAST of FE659217 vs. ExPASy Swiss-Prot
Match: AB40G_ARATH (ABC transporter G family member 40 OS=Arabidopsis thaliana GN=ABCG40 PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 1.918e-49
Identity = 89/155 (57.42%), Postives = 113/155 (72.90%), Query Frame = -2
Query:    5 SQPFFTQFKASFWKQYWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFT 469
            SQ F TQ  AS WKQ+WSYWRNP Y A+RFL T  IA+ FG +FWD G K+  +QDL N +G+MY+  LFLG  NA S  PV+ VERTV+YRE+AAGM+SA+ YA  QV +EI YV  Q ++Y LI+Y+MIGF+W   KFF + +FM+ SF+ FT
Sbjct: 1145 SQSFLTQCMASLWKQHWSYWRNPPYTAVRFLFTIGIALMFGTMFWDLGGKTKTRQDLSNAMGSMYTAVLFLGLQNAASVQPVVNVERTVFYREQAAGMYSAMPYAFAQVFIEIPYVLVQAIVYGLIVYAMIGFEWTAVKFFWYLFFMYGSFLTFT 1299          
BLAST of FE659217 vs. ExPASy Swiss-Prot
Match: PDR1_NICPL (Pleiotropic drug resistance protein 1 OS=Nicotiana plumbaginifolia GN=PDR1 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 3.271e-49
Identity = 88/155 (56.77%), Postives = 113/155 (72.90%), Query Frame = -2
Query:    5 SQPFFTQFKASFWKQYWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFT 469
            SQPF+TQ  A  WKQ+WSYWRNP Y A+R + T  IA+ FG +FWD G K SR QDL N +G+MY+  LFLG  N+ S  PV+ VERTV+YRE+AAGM+SA+ YA  QV +EI Y+  Q  +Y LI+YSMIGF+W + KFF  F+FM+ +F+ FT
Sbjct: 1158 SQPFWTQCMACLWKQHWSYWRNPAYTAVRLIFTTFIALIFGTMFWDIGTKVSRNQDLVNAMGSMYAAVLFLGVQNSSSVQPVVSVERTVFYREKAAGMYSAIPYAFAQVLIEIPYIFVQATVYGLIVYSMIGFEWTVAKFFWDFFFMFFTFLYFT 1312          
BLAST of FE659217 vs. ExPASy Swiss-Prot
Match: PDR1_ORYSJ (Probable pleiotropic drug resistance protein 1 OS=Oryza sativa subsp. japonica GN=PDR1 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 2.592e-46
Identity = 85/155 (54.84%), Postives = 108/155 (69.68%), Query Frame = -2
Query:    5 SQPFFTQFKASFWKQYWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFT 469
            SQ F  Q  A  WKQ+ SYWRNP YNAIR   T  IA+ FG +FWD G K  + QDL N +G+MY+  LF+G  N  S  PV+ VERTV+YRERAAGM+SAL YA GQVA+E  Y   Q+V+Y +I+YSMIGF+W + KFF + +FM+ + + FT
Sbjct: 1191 SQSFLIQCLACLWKQHLSYWRNPPYNAIRLFFTTVIALIFGTIFWDLGGKMGQSQDLFNAMGSMYAAVLFIGVLNGQSVQPVVSVERTVFYRERAAGMYSALPYAFGQVAIEFPYTLVQSVIYSIIVYSMIGFQWTVAKFFWYLFFMFFTLLYFT 1345          
BLAST of FE659217 vs. ExPASy Swiss-Prot
Match: PDR4_ORYSJ (Pleiotropic drug resistance protein 4 OS=Oryza sativa subsp. japonica GN=PDR4 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 3.385e-46
Identity = 80/155 (51.61%), Postives = 112/155 (72.26%), Query Frame = -2
Query:    5 SQPFFTQFKASFWKQYWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFT 469
            S+ F TQ  A  WKQ WSYWRNP Y A+R L T  IA+ FG +FW+ G ++ +QQDL N +G+MY+  L++G  N+ S  PV+ VERTV+YRERAAGM+SA  YA GQVA+E+ Y+  QT++Y +++YSMIGF+W + KF  + +FM+ + + FT
Sbjct: 1172 SRSFITQCLACLWKQNWSYWRNPSYTAVRLLFTIVIALMFGTMFWNLGTRTKKQQDLFNAMGSMYAAVLYIGVQNSGSVQPVVVVERTVFYRERAAGMYSAFPYAFGQVAIELPYIMVQTLIYGVLVYSMIGFEWTVAKFLWYLFFMYFTLLYFT 1326          
BLAST of FE659217 vs. ExPASy Swiss-Prot
Match: PDR2_ORYSJ (Probable pleiotropic drug resistance protein 2 OS=Oryza sativa subsp. japonica GN=PDR2 PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 4.421e-46
Identity = 84/155 (54.19%), Postives = 107/155 (69.03%), Query Frame = -2
Query:    5 SQPFFTQFKASFWKQYWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFT 469
            S  F  Q  A  WK + SYWRNP YNAIR   T  IA+ FG +FWD G K+ + QDL N +G+MYS  LF+G  N+ S  PV+ VERTV+YRERAAGM+SA  YA GQVA+E  Y   Q+++Y +I+YSMIGFKW   KFF + +FM+ +F+ FT
Sbjct: 1187 SLSFLNQCLACLWKMHLSYWRNPPYNAIRLFFTTVIALLFGTIFWDLGGKTGKSQDLFNAMGSMYSAVLFIGVLNSQSVQPVVSVERTVFYRERAAGMYSAFPYAFGQVAIEFPYTLVQSIIYGIIVYSMIGFKWTAAKFFWYLFFMFFTFLYFT 1341          
BLAST of FE659217 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSJ (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. japonica GN=PDR3 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 1.422e-44
Identity = 82/155 (52.90%), Postives = 104/155 (67.10%), Query Frame = -2
Query:    5 SQPFFTQFKASFWKQYWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFT 469
            SQ   TQ  A  WKQ  SYWRNP YNA+RF  T  IA+ FG +FWD G K ++ QDL N +G+MY+  LF+G  N  S  PV+ VERTV+YRERAAGM+SA  YA GQV +EI Y   Q  +Y +I+Y+MIGF+W   KFF + +FM  + + FT
Sbjct: 1180 SQSSLTQCMACLWKQNLSYWRNPPYNAVRFFFTTVIALLFGTIFWDLGGKVTKSQDLFNAMGSMYAAVLFIGVMNCTSVQPVVAVERTVFYRERAAGMYSAFPYAFGQVVIEIPYTLVQATVYGIIVYAMIGFEWTAAKFFWYLFFMVFTLLYFT 1334          
The following BLAST results are available for this feature:
BLAST of FE659217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
AB34G_ARATH3.377e-5462.18ABC transporter G family member 34 OS=Arabidopsis ... [more]
AB39G_ARATH4.411e-5461.54ABC transporter G family member 39 OS=Arabidopsis ... [more]
PDR2_NICPL5.392e-5259.62Pleiotropic drug resistance protein 2 OS=Nicotiana... [more]
PDR1_TOBAC8.608e-5055.48Pleiotropic drug resistance protein 1 OS=Nicotiana... [more]
AB40G_ARATH1.918e-4957.42ABC transporter G family member 40 OS=Arabidopsis ... [more]
PDR1_NICPL3.271e-4956.77Pleiotropic drug resistance protein 1 OS=Nicotiana... [more]
PDR1_ORYSJ2.592e-4654.84Probable pleiotropic drug resistance protein 1 OS=... [more]
PDR4_ORYSJ3.385e-4651.61Pleiotropic drug resistance protein 4 OS=Oryza sat... [more]
PDR2_ORYSJ4.421e-4654.19Probable pleiotropic drug resistance protein 2 OS=... [more]
PDR3_ORYSJ1.422e-4452.90Pleiotropic drug resistance protein 3 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank description175 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659217 ID=FE659217; Name=FE659217; organism=Citrus sinensis; type=EST; length=470bp
ACAATGTGAAAATGACAAAAGACGCCCACATGAAGTAGAAGAACAAGAAG
AATTTTCCCAGCTCCCACTTGAATCCTATCATCGAGTAAAGGATAAGAAC
ATACATGACAGTTTGAGCTGTCACATATATTATCTCTACTGCAACTTGAC
CAAGTGCATAAGACAGTGCAGAAAACATCCCGGCTGCCCTTTCACGGTAG
TATACCGTTCTCTCAACACAGATAACAGGTATCGCAGACACGGCATTGGT
GGTCCCAAGGAAAAGACAAACCGAATACATAGCTCCTAAAAGATTCTGTA
GATCCTGTTGTCTGGAACTCTTCTGTCCTTTGTCCCAGAAGAGAAGACCG
AAGAAAATGGCGATGGTGGCAGTCATGAGAAATCGAATAGCGTTGTATTG
AGGATTTCTCCAGTAAGACCAATACTGTTTCCAGAAAGAAGCCTTAAATT
GAGTGAAAAATGGTTGGGAG
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