FE659212

Overview
NameFE659212
Unique NameFE659212
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length375
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12302 contig Csv1_Contig12302:1193..1567. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FE659212 vs. ExPASy Swiss-Prot
Match: C72A1_CATRO (Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.600e-39
Identity = 67/125 (53.60%), Postives = 98/125 (78.40%), Query Frame = -1
Query:    1 LRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELSPSYVHAPTAVPTLHPELG 375
            LRLYPPV  L++ V K+TKLG+ T+PAG Q+ LP +++H++  +WG DA+EF P RF +G++ A KN V+Y PF+ GPR+C+GQNFAL++AK+ +AMILQ + F+++PSYVHAP  + T+ P+ G
Sbjct:  390 LRLYPPVIDLTKIVHKDTKLGSYTIPAGTQVMLPTVMLHREKSIWGEDAMEFNPMRFVDGVANATKNNVTYLPFSWGPRVCLGQNFALLQAKLGLAMILQRFKFDVAPSYVHAPFTILTVQPQFG 514          
BLAST of FE659212 vs. ExPASy Swiss-Prot
Match: C13A7_CAEEL (Putative cytochrome P450 CYP13A7 OS=Caenorhabditis elegans GN=cyp-13A7 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.207e-18
Identity = 46/112 (41.07%), Postives = 68/112 (60.71%), Query Frame = -1
Query:   43 LRLYPPVTVL-SRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELSPSYV 375
            LRLYP  +++ +R  LK T +  + + AG  I +    +H DP++WG D  EFKPER+  G  +    +  Y PF +GPRIC+G   A++E KM +  IL+NY+FE +P  V
Sbjct:  384 LRLYPLASLVHNRKCLKTTNVLGMEIEAGTNINVDTWSLHHDPKVWGDDVNEFKPERWESG-DELFFAKGGYLPFGMGPRICIGMRLAMMEMKMLLTNILKNYTFETTPETV 494          
BLAST of FE659212 vs. ExPASy Swiss-Prot
Match: CP3AT_PIG (Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.388e-18
Identity = 42/105 (40.00%), Postives = 67/105 (63.81%), Query Frame = -1
Query:   61 LRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 375
            LRLYP    L R+  K+ ++  + +P G  + +P+ ++H+DP+LW  +  EF+PERF++   K   N  +Y PF  GPR C+G  FAL+  K+A+  +LQN+SF+
Sbjct:  364 LRLYPIAARLERACKKDVEIHGVFVPKGTVVVVPVFVLHRDPDLWP-EPEEFRPERFSKK-HKDTINPYTYLPFGTGPRNCIGMRFALMNMKLALVRVLQNFSFK 466          
BLAST of FE659212 vs. ExPASy Swiss-Prot
Match: C13A2_CAEEL (Putative cytochrome P450 CYP13A2 OS=Caenorhabditis elegans GN=cyp-13A2 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.095e-17
Identity = 43/106 (40.57%), Postives = 67/106 (63.21%), Query Frame = -1
Query:   61 LRLYPPVTVL-SRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 375
            LRLYP  ++  SR  +K T +  + + AGV + +    +H DPELWG D  EFKPER++    +  +++ +Y PF LGPR C+G   A++E K+ +  +L+NY+FE
Sbjct:  381 LRLYPLASISNSRKCMKTTTVNGVKIEAGVYVQMDTWSLHYDPELWGEDVKEFKPERWS--TDEPLEHKGAYLPFGLGPRQCIGMRLAIMEQKILLTHLLKNYTFE 484          
BLAST of FE659212 vs. ExPASy Swiss-Prot
Match: CP3AS_BOVIN (Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.163e-17
Identity = 41/105 (39.05%), Postives = 67/105 (63.81%), Query Frame = -1
Query:   61 LRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 375
            LR++P    L R   K+ ++  +T+P G  + +P+ ++H +PELW  +  EF+PERF++  +K + N   Y PF  GPR C+G  FA++  K+A+  ILQN+SF+
Sbjct:  364 LRMFPIAGRLERVCKKDVEIHGVTIPKGTTVLVPLFVLHNNPELWP-EPEEFRPERFSKN-NKDSINPYVYLPFGTGPRNCLGMRFAIMNIKLALVRILQNFSFK 466          
BLAST of FE659212 vs. ExPASy Swiss-Prot
Match: CP3AO_SHEEP (Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.163e-17
Identity = 39/105 (37.14%), Postives = 68/105 (64.76%), Query Frame = -1
Query:   61 LRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 375
            LR++P    L R   K+ ++  +++P G  + +P+ ++H+DP+LW  +  EF+PERF++  +K + N   Y PF  GPR C+G  FA++  K+A+  +LQN+SF+
Sbjct:  364 LRMFPIAVRLDRLCKKDVEIHGVSIPKGTAVTVPIFVLHRDPQLWP-EPEEFRPERFSKK-NKDSINPYVYLPFGTGPRNCIGMRFAIMNMKLAIVRVLQNFSFK 466          
BLAST of FE659212 vs. ExPASy Swiss-Prot
Match: C13AA_CAEEL (Putative cytochrome P450 CYP13A10 OS=Caenorhabditis elegans GN=cyp-13A10 PE=2 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 7.101e-17
Identity = 45/107 (42.06%), Postives = 63/107 (58.88%), Query Frame = -1
Query:   58 LRLYPPVTVL-SRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFEL 375
            LRLYP  T+  SR  ++ TKLGN+ +  G  + +    +H D ++WG DA EFKPER+ +        +  Y  F LGPR CVG   A +E KM +A IL+ Y+FE+
Sbjct:  384 LRLYPLGTMANSRRCMRATKLGNVEVEVGTMVQVDTWSLHTDTKIWGDDAKEFKPERWLDPNCDQVFQKGGYISFGLGPRQCVGMRLAYMEEKMLLAHILRKYTFEV 490          
BLAST of FE659212 vs. ExPASy Swiss-Prot
Match: CP131_DROME (Probable cytochrome P450 313a1 OS=Drosophila melanogaster GN=Cyp313a1 PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 9.274e-17
Identity = 43/112 (38.39%), Postives = 66/112 (58.93%), Query Frame = -1
Query:   46 LRLYPPVTVLSRSVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERF-AEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELSPSY 375
            LRL P + + +R    + +L N + +P GV IG+ M   H++PE+WG DA  F P+ F AE + +  K+  +Y PFA G R C+G  +A++ +K A+  IL+NY    S  Y
Sbjct:  358 LRLIPAIPITARETKNDVRLSNGVLIPKGVVIGIDMFHTHRNPEVWGPDADNFNPDNFLAENMEQ--KHPYAYIPFARGKRNCIGSKYAMMSSKFALCRILRNYKISTSTLY 467          
BLAST of FE659212 vs. ExPASy Swiss-Prot
Match: C13A5_CAEEL (Putative cytochrome P450 CYP13A5 OS=Caenorhabditis elegans GN=cyp-13A5 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.274e-17
Identity = 41/108 (37.96%), Postives = 66/108 (61.11%), Query Frame = -1
Query:   55 LRLYPPVTVL-SRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELS 375
            LR+YP  +++ +R  +KET +  + +  G  + +    +H DP++WG DA EF+PER+  G  +    +  Y PF +GPRIC+G   A++E KM +  IL+ Y+FE S
Sbjct:  384 LRMYPLASIVHNRKCMKETNVLGVQIEKGTNVQVDTWTLHYDPKVWGEDANEFRPERWESG-DELFYAKGGYLPFGMGPRICIGMRLAMMEKKMLLTHILKKYTFETS 490          
BLAST of FE659212 vs. ExPASy Swiss-Prot
Match: C13A1_CAEEL (Putative cytochrome P450 CYP13A1 OS=Caenorhabditis elegans GN=cyp-13A1 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.274e-17
Identity = 43/106 (40.57%), Postives = 60/106 (56.60%), Query Frame = -1
Query:   61 LRLYP-PVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 375
            LRLYP      SR  ++ TKLGN+ +  G  I +    +H DP +WG DA +FKPER+    S     +  Y PF LGPR C+G   A +E K+ +  IL+ ++FE
Sbjct:  384 LRLYPLGAFANSRRCMRNTKLGNMKVEVGTMIQVDTWTLHTDPNIWGDDAEDFKPERWQTPNSDQIYQKSGYIPFGLGPRQCIGMRLAYMEEKILLVHILRKFTFE 489          
The following BLAST results are available for this feature:
BLAST of FE659212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
C72A1_CATRO6.600e-3953.60Secologanin synthase OS=Catharanthus roseus GN=CYP... [more]
C13A7_CAEEL2.207e-1841.07Putative cytochrome P450 CYP13A7 OS=Caenorhabditis... [more]
CP3AT_PIG8.388e-1840.00Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2... [more]
C13A2_CAEEL1.095e-1740.57Putative cytochrome P450 CYP13A2 OS=Caenorhabditis... [more]
CP3AS_BOVIN4.163e-1739.05Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2... [more]
CP3AO_SHEEP4.163e-1737.14Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2... [more]
C13AA_CAEEL7.101e-1742.06Putative cytochrome P450 CYP13A10 OS=Caenorhabditi... [more]
CP131_DROME9.274e-1738.39Probable cytochrome P450 313a1 OS=Drosophila melan... [more]
C13A5_CAEEL9.274e-1737.96Putative cytochrome P450 CYP13A5 OS=Caenorhabditis... [more]
C13A1_CAEEL9.274e-1740.57Putative cytochrome P450 CYP13A1 OS=Caenorhabditis... [more]

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Properties
Property NameValue
Genbank description160 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659212 ID=FE659212; Name=FE659212; organism=Citrus sinensis; type=EST; length=375bp
ACCCAGTTCCGGATGAAGGGTTGGAACCGCCGTTGGAGCATGGACATAGG
ATGGAGACAACTCGAATGAGTAGTTTTGAAGAATCATTGCCATGGCCATT
TTTGCTTCTACTAGAGCAAAATTTTGTCCAACACATATCCTAGGACCCAA
TGCGAATGGGAAATATGAAACTTGATTTTTGGCCGCCTTTGAAATTCCTT
CCGCAAACCTTTCCGGCTTAAACTCAACTGCATCGTAACCCCAAAGTTCA
GGATCCTGGTGAACTAGGATCATTGGCAAGCCAATTTGAACCCCAGCGGG
TAATGTCAAGTTTCCGAGTTTCGTTTCCTTAAGAACAGATCGACTAAGCA
CAGTTACAGGCGGATAAAGCCTGAG
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