FE659195

Overview
NameFE659195
Unique NameFE659195
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length248
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1009 contig Csv1_Contig1009:449..696. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FE659195 vs. ExPASy Swiss-Prot
Match: AG_SOLLC (Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.547e-29
Identity = 60/82 (73.17%), Postives = 73/82 (89.02%), Query Frame = -2
Query:    2 KKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIE 247
            KKA +D+SNTGS+ EANAQ+YQQEA+KLR QI N+ N NRNM+GE+L+G+  KELKN+E R+EKGIS+IRSKKNELLFAEIE
Sbjct:   86 KKACSDSSNTGSVSEANAQYYQQEASKLRAQIGNLMNQNRNMMGEALAGMKLKELKNLEQRIEKGISKIRSKKNELLFAEIE 167          
BLAST of FE659195 vs. ExPASy Swiss-Prot
Match: AG_TOBAC (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 4.633e-29
Identity = 61/82 (74.39%), Postives = 74/82 (90.24%), Query Frame = -2
Query:    2 KKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIE 247
            KKA +D+SNTGSI EANAQ+YQQEA+KLR QI N+QN NRNMLGESL+ L+ ++LKN+E ++EKGIS+IRSKKNELLFAEIE
Sbjct:   86 KKACSDSSNTGSISEANAQYYQQEASKLRAQIGNLQNQNRNMLGESLAALSLRDLKNLEQKIEKGISKIRSKKNELLFAEIE 167          
BLAST of FE659195 vs. ExPASy Swiss-Prot
Match: AG_PETHY (Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.760e-28
Identity = 59/82 (71.95%), Postives = 73/82 (89.02%), Query Frame = -2
Query:    2 KKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIE 247
            KKA +D+SNTGSI EANAQ+YQQEA+KLR QI N+QN NRN LGESL+ LN ++L+N+E ++EKGIS+IR+KKNELLFAEIE
Sbjct:   86 KKACSDSSNTGSIAEANAQYYQQEASKLRAQIGNLQNQNRNFLGESLAALNLRDLRNLEQKIEKGISKIRAKKNELLFAEIE 167          
BLAST of FE659195 vs. ExPASy Swiss-Prot
Match: AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.648e-26
Identity = 58/82 (70.73%), Postives = 70/82 (85.37%), Query Frame = -2
Query:    2 KKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIE 247
            KKA  D+ NT S+ EANAQFYQQEA+KLR +IS++Q +NRNM+GESL  L  ++LK +ET+LEKGISRIRSKKNELLFAEIE
Sbjct:   86 KKACTDSPNTSSVSEANAQFYQQEASKLRQEISSIQKNNRNMMGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIE 167          
BLAST of FE659195 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.177e-26
Identity = 58/82 (70.73%), Postives = 69/82 (84.15%), Query Frame = -2
Query:    2 KKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIE 247
            KKA +D  N  S+ EAN Q+YQQEA+KLR QI ++QNSNR+++GESL  LNFKELKN+E RLEKGISR+RSKKNELL AEIE
Sbjct:   85 KKACSDAVNPPSVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIE 166          
BLAST of FE659195 vs. ExPASy Swiss-Prot
Match: AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.041e-25
Identity = 56/82 (68.29%), Postives = 69/82 (84.15%), Query Frame = -2
Query:    2 KKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIE 247
            KKA +D  N  +I EAN Q+YQQEA+KLR QI ++QN NR++LGESL  LNFKELKN+E+RLEKGISR+RSKK+E+L AEIE
Sbjct:   85 KKACSDAVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIE 166          
BLAST of FE659195 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 4.487e-24
Identity = 52/82 (63.41%), Postives = 70/82 (85.37%), Query Frame = -2
Query:    2 KKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIE 247
            KKA +D SNTGS+ E NAQ+YQQE+AKLR QI ++QNSNR ++GE++  ++ KEL+N+E RLE+ I+RIRSKKNELLF+EI+
Sbjct:   86 KKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEID 167          
BLAST of FE659195 vs. ExPASy Swiss-Prot
Match: AG_BRANA (Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.860e-24
Identity = 51/82 (62.20%), Postives = 70/82 (85.37%), Query Frame = -2
Query:    2 KKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIE 247
            KKA +D SNTGS+ E NAQ+YQQE+AKLR QI ++QNSNR ++GE++  ++ KEL+N+E RL++ ++RIRSKKNELLFAEI+
Sbjct:   86 KKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLDRSVNRIRSKKNELLFAEID 167          
BLAST of FE659195 vs. ExPASy Swiss-Prot
Match: AGL11_ARATH (Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana GN=AGL11 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.908e-23
Identity = 53/82 (64.63%), Postives = 67/82 (81.71%), Query Frame = -2
Query:    2 KKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIE 247
            KKA +D++NT ++ E NA +YQQE+AKLR QI  +QNSNRN++G+SLS L+ KELK +E RLEK ISRIRSKK+ELL  EIE
Sbjct:   70 KKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSLSVKELKQVENRLEKAISRIRSKKHELLLVEIE 151          
BLAST of FE659195 vs. ExPASy Swiss-Prot
Match: MAD58_ORYSJ (MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica GN=MADS58 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.885e-22
Identity = 48/82 (58.54%), Postives = 68/82 (82.93%), Query Frame = -2
Query:    2 KKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIE 247
            KKA +DTSN  ++ E NAQ YQQEAAKL+ QI+N+QNSNR ++G++++ +N +ELK +E RL+KG+ +IR++KNELL AEIE
Sbjct:  112 KKANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTMNHRELKQLEGRLDKGLGKIRARKNELLCAEIE 193          
The following BLAST results are available for this feature:
BLAST of FE659195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
AG_SOLLC3.547e-2973.17Floral homeotic protein AGAMOUS OS=Solanum lycoper... [more]
AG_TOBAC4.633e-2974.39Floral homeotic protein AGAMOUS OS=Nicotiana tabac... [more]
AG_PETHY1.760e-2871.95Floral homeotic protein AGAMOUS OS=Petunia hybrida... [more]
AG_PANGI1.648e-2670.73Floral homeotic protein AGAMOUS OS=Panax ginseng G... [more]
AGL1_ARATH8.177e-2670.73Agamous-like MADS-box protein AGL1 OS=Arabidopsis ... [more]
AGL5_ARATH9.041e-2568.29Agamous-like MADS-box protein AGL5 OS=Arabidopsis ... [more]
AG_ARATH4.487e-2463.41Floral homeotic protein AGAMOUS OS=Arabidopsis tha... [more]
AG_BRANA5.860e-2462.20Floral homeotic protein AGAMOUS OS=Brassica napus ... [more]
AGL11_ARATH2.908e-2364.63Agamous-like MADS-box protein AGL11 OS=Arabidopsis... [more]
MAD58_ORYSJ1.885e-2258.54MADS-box transcription factor 58 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank description108 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659195 ID=FE659195; Name=FE659195; organism=Citrus sinensis; type=EST; length=248bp
ACTCAATTTCTGCAAACAGCAGCTCATTCTTTTTAGATCGGATTCTGCTA
ATACCTTTCTCTAAACGAGTCTCCATGTTCTTGAGTTCCTTGAAATTTAA
CCCACTTAGTGATTCACCCAACATGTTTCTGTTTGAATTTTGCATATTGC
TAATTTGTATCCTCAGCTTGGCAGCTTCTTGCTGGTAGAACTGAGCATTT
GCTTCACAGATAGACCCAGTATTTGAGGTATCTGCAGTGGCCTTCTTG
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