FE659183

Overview
NameFE659183
Unique NameFE659183
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length402
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FE659183_ssr35 microsatellite FE659183_ssr35:35..49. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig11924 contig Csv1_Contig11924:792..1198. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FE659183 vs. ExPASy Swiss-Prot
Match: PLST2_ARATH (Probable plastidic glucose transporter 2 OS=Arabidopsis thaliana GN=At1g67300 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.571e-32
Identity = 68/94 (72.34%), Postives = 82/94 (87.23%), Query Frame = 1
Query:  121 VVVIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASL 402
            VV IGSTLFALQQLSGINA+FYFSS+VFKSAG+ S L N+FVG++NLLGSV+AMVLMDK+GRK LL WSF  MA +MA+QV A+SSY+P  ++L
Sbjct:  293 VVFIGSTLFALQQLSGINAVFYFSSTVFKSAGVPSDLGNIFVGVSNLLGSVIAMVLMDKVGRKLLLLWSFIGMAAAMALQVGATSSYLPHFSAL 386          
BLAST of FE659183 vs. ExPASy Swiss-Prot
Match: PLST3_ARATH (Probable plastidic glucose transporter 3 OS=Arabidopsis thaliana GN=At1g79820 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 6.394e-26
Identity = 61/88 (69.32%), Postives = 70/88 (79.55%), Query Frame = 1
Query:  115 FAVVVIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSS 378
            F VV IGSTLFALQQLSGINA+FYFSS+VFK AG+ S  AN+ VG+ NLLGS VA+VLMDKLGRK LL  SF  MAVS+ +Q  A +S
Sbjct:  292 FRVVFIGSTLFALQQLSGINAVFYFSSTVFKKAGVPSASANICVGVCNLLGSTVAVVLMDKLGRKVLLIGSFAGMAVSLGLQAIAYTS 379          
BLAST of FE659183 vs. ExPASy Swiss-Prot
Match: PLST4_ARATH (Plastidic glucose transporter 4 OS=Arabidopsis thaliana GN=At5g16150 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 3.517e-16
Identity = 43/80 (53.75%), Postives = 60/80 (75.00%), Query Frame = 1
Query:  121 VVVIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGL-ANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAI 357
            VV +G+ LF  QQL+GINA+ Y+S+SVF+SAG+ S + A+  VG +N+ G+ VA  LMDK+GRK+LL  SF  MA+SM +
Sbjct:  345 VVSVGAALFLFQQLAGINAVVYYSTSVFRSAGIQSDVAASALVGASNVFGTAVASSLMDKMGRKSLLLTSFGGMALSMLL 424          
BLAST of FE659183 vs. ExPASy Swiss-Prot
Match: PLST1_ARATH (Probable plastidic glucose transporter 1 OS=Arabidopsis thaliana GN=At1g05030 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.477e-14
Identity = 41/84 (48.81%), Postives = 57/84 (67.86%), Query Frame = 1
Query:  121 VVVIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGL-ANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAA 369
            V  IG +LF LQQ +GIN + YFSS  F++ G++SG  A+++VG+ N  G++ A  L+DK GRK LL  S+  MAVSM + V A
Sbjct:  320 VAFIGGSLFVLQQFAGINGVLYFSSLTFQNVGITSGAQASLYVGVTNFAGALCASYLIDKQGRKKLLIGSYLGMAVSMFLIVYA 403          
BLAST of FE659183 vs. ExPASy Swiss-Prot
Match: ERDL4_ARATH (Sugar transporter ERD6-like 4 OS=Arabidopsis thaliana GN=At1g19450 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.588e-11
Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = 1
Query:  124 VVIGSTLFALQQLSGINAIFYFSSSVFKSAGL-SSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAA 369
            +++G  L ALQQL GIN + ++SS++F+SAG+ SS +A   VG+  ++ + +A  L+DK GR+ LL  S   M +S+ I   A
Sbjct:  285 LMVGIGLLALQQLGGINGVLFYSSTIFESAGVTSSNVATFGVGVVQVVATGIATWLVDKAGRRLLLMISSIGMTISLVIVAVA 367          
The following BLAST results are available for this feature:
BLAST of FE659183 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PLST2_ARATH1.571e-3272.34Probable plastidic glucose transporter 2 OS=Arabid... [more]
PLST3_ARATH6.394e-2669.32Probable plastidic glucose transporter 3 OS=Arabid... [more]
PLST4_ARATH3.517e-1653.75Plastidic glucose transporter 4 OS=Arabidopsis tha... [more]
PLST1_ARATH1.477e-1448.81Probable plastidic glucose transporter 1 OS=Arabid... [more]
ERDL4_ARATH7.588e-1140.96Sugar transporter ERD6-like 4 OS=Arabidopsis thali... [more]
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Properties
Property NameValue
Genbank description79 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659183 ID=FE659183; Name=FE659183; organism=Citrus sinensis; type=EST; length=402bp
AGTAATTCTATTCTTTTCTGATTCAGCATCTACAGCTGCTGCTGCTGCTG
CAGAACCATCGCTCTTTCTCTTTCTTTCATTTTTCTTTTGGGGATTTGTT
ATTCACATGTTCCTTTTGCAGTTGTTGTTATTGGATCAACCCTCTTTGCT
TTACAACAGCTATCTGGTATAAATGCTATATTTTATTTCTCTTCATCTGT
ATTTAAAAGTGCGGGACTATCATCGGGCCTTGCAAATGTCTTCGTTGGAA
TTGCAAATTTATTAGGATCTGTTGTCGCAATGGTATTGATGGATAAACTA
GGAAGGAAGGCACTCCTCCAGTGGAGTTTCTTCAGCATGGCAGTGTCAAT
GGCTATCCAAGTTGCTGCATCAAGTTCTTATATACCAGGCTCTGCATCTC
TG
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