FE659161

Overview
NameFE659161
Unique NameFE659161
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length449
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1283 contig Csv1_Contig1283:231..680. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FE659161 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.585e-39
Identity = 83/119 (69.75%), Postives = 87/119 (73.11%), Query Frame = 3
Query:    3 SAFDPFSSDVWAPL------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 341
            S FDPFS DVW P        S S E S F S +VDWKET EAHVFKAD+PGL          DGRVLQISGER+VEKEDKND WHRVER  GK VRRFRLPENAK+DQVKASMENGVL
Sbjct:   14 SVFDPFSLDVWDPFKDFPFPSSLSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVL 132          
BLAST of FE659161 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 2.990e-38
Identity = 82/119 (68.91%), Postives = 91/119 (76.47%), Query Frame = 3
Query:    3 SAFDPFSSDVWAP---LG---SSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 341
            S FDPFS DV+ P   LG   S+S E S FA+ ++DWKET EAHVFKADLPGL          + RVLQISGER+VEKEDKND WHRVER  GKF+RRFRLPENAK+DQVKASMENGVL
Sbjct:   15 SVFDPFSIDVFDPFKELGFTVSNSGETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVL 133          
BLAST of FE659161 vs. ExPASy Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 5.099e-38
Identity = 79/119 (66.39%), Postives = 90/119 (75.63%), Query Frame = 3
Query:    3 SAFDPFSSDVWAPL------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 341
            S FDPFS DV+ P       G++S E S FA+ ++DWKET EAHVFKADLPGL          + RVLQISGER++EKEDKNDKW RVER  GKF+RRFRLPENAK+DQVKASMENGVL
Sbjct:   15 SMFDPFSIDVFDPFRELGFPGTNSGETSAFANTRIDWKETPEAHVFKADLPGLKLEEVKVEVEEDRVLQISGERNMEKEDKNDKWQRVERSSGKFMRRFRLPENAKMDQVKASMENGVL 133          
BLAST of FE659161 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 8.698e-38
Identity = 81/124 (65.32%), Postives = 87/124 (70.16%), Query Frame = 3
Query:    3 SAFDPFSSDVWAPL-----------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 341
            + FDPFS DVW PL            S   E   F S +VDWKET EAHVFKADLPGL          D RVLQISGERSVEKEDKND+WHRVER  GKF+RRFRLPENAK+D+VKASMENGVL
Sbjct:   14 NVFDPFSLDVWDPLKDFPFSNSSPSASFPRENPAFVSTRVDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASMENGVL 137          
BLAST of FE659161 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 1.938e-37
Identity = 79/124 (63.71%), Postives = 87/124 (70.16%), Query Frame = 3
Query:    3 SAFDPFSSDVWAPL-----------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 341
            + FDPFS DVW P             S   E S F S +VDWKET EAHVFKADLPG+          D RVLQISGERSVEKEDKND+WHR+ER  GKF+RRFRLPENAK+DQVKA+MENGVL
Sbjct:   14 NVFDPFSLDVWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVL 137          
BLAST of FE659161 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 2.531e-37
Identity = 78/120 (65.00%), Postives = 86/120 (71.67%), Query Frame = 3
Query:    3 SAFDPFSSDVW-------APLGSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 341
            + FDPFS D+W        P  S S E S F S +VDWKET EAHVFKAD+PGL          D RVLQISGER+VEKEDKND WHRVER  GKF RRFRLPENAK+++VKASMENGVL
Sbjct:   14 NVFDPFSLDMWDPFKDFHVPTSSVSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKASMENGVL 133          
BLAST of FE659161 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 5.638e-37
Identity = 77/119 (64.71%), Postives = 88/119 (73.95%), Query Frame = 3
Query:    3 SAFDPFSSDVWAPL------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 341
            S FDPFS DV+ P        ++S E S FA+ ++DWKET E HVFK DLPGL          + RVLQISGER+VEKEDKNDKWHR+ER  GKF+RRFRLPENAK+DQVKASMENGVL
Sbjct:   15 SMFDPFSIDVFDPFRELGFPSTNSGESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAKMDQVKASMENGVL 133          
BLAST of FE659161 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 9.617e-37
Identity = 80/127 (62.99%), Postives = 89/127 (70.08%), Query Frame = 3
Query:    3 SAFDPFSSDVWAP---------LGSSS-----NEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 341
            + FDPFS DVW P         L S+S      E S F S +VDWKET EAHVFKAD+PGL          D +VLQISGER+VEKEDKND WHRVER  GKF+RRFRLPENAK++QVKASMENGVL
Sbjct:   14 NVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVL 140          
BLAST of FE659161 vs. ExPASy Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 9.617e-37
Identity = 80/122 (65.57%), Postives = 88/122 (72.13%), Query Frame = 3
Query:   12 DPFSSDVWAP----------LGSSS--NEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 341
            DPFS DVW P          L +SS   E S F S ++DWKET EAHVFKADLPGL          D RVLQISGER+VEKEDKND+WHRVER  GKF+RRFRLPENAK+DQVKA+MENGVL
Sbjct:    1 DPFSLDVWDPFKDFPFTNSALSASSFPQENSAFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVL 122          
BLAST of FE659161 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 9.617e-37
Identity = 74/122 (60.66%), Postives = 88/122 (72.13%), Query Frame = 3
Query:    3 SAFDPFSSDVWAPLGS---------SSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 341
            + FDPFS D+W P  S         S N+ + FA+A++DWKET E+HVFKADLPG+          +G VL ISG+RS EKEDKNDKWHRVER  G+F+RRFRLPENAK+DQVKA MENGVL
Sbjct:    8 NVFDPFSLDLWDPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGMENGVL 129          
The following BLAST results are available for this feature:
BLAST of FE659161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
HSP11_SOYBN1.585e-3969.7517.3 kDa class I heat shock protein OS=Glycine max... [more]
HSP12_SOLPE2.990e-3868.9117.6 kDa class I heat shock protein OS=Solanum per... [more]
HSP11_SOLPE5.099e-3866.3917.7 kDa class I heat shock protein OS=Solanum per... [more]
HSP11_PEA8.698e-3865.3218.1 kDa class I heat shock protein OS=Pisum sativ... [more]
HSP12_MEDSA1.938e-3763.7118.2 kDa class I heat shock protein OS=Medicago sa... [more]
HSP14_SOYBN2.531e-3765.0017.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_SOLLC5.638e-3764.7117.8 kDa class I heat shock protein OS=Solanum lyc... [more]
HSP16_SOYBN9.617e-3762.9918.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_MEDSA9.617e-3765.5718.1 kDa class I heat shock protein (Fragment) OS=... [more]
HS16B_ORYSJ9.617e-3760.6616.9 kDa class I heat shock protein 2 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank description5 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659161 ID=FE659161; Name=FE659161; organism=Citrus sinensis; type=EST; length=449bp
GGAGCGCGTTCGACCCATTTTCCTCGGACGTCTGGGCGCCCCTTGGCTCC
TCCAGCAACGAGGTGTCAACATTCGCCAGTGCTCAAGTCGATTGGAAAGA
AACCCGGGAAGCTCATGTTTTCAAGGCGGATCTTCCGGGGCTCAAGAAAG
AGGAAGTGAAGGTTGAAGTTGAGGACGGGAGAGTCCTTCAGATCAGCGGT
GAGAGGAGCGTCGAGAAGGAAGACAAGAACGACAAATGGCACCGTGTTGA
GAGGGGCCGCGGCAAGTTCGTGAGGAGGTTCCGGTTGCCTGAGAATGCCA
AGATCGATCAAGTTAAGGCATCAATGGAGAATGGTGTCCTCACCGTCACT
GTTCCCAAAGTGGAGGAGAAGAAGCCTGAGGTCAAATCCATTAACACACA
GAACAAAACAAGAACCAAATTAAAAAGGCTGCAATTAACGGAGAGTTTC
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