FE659157

Overview
NameFE659157
Unique NameFE659157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length603
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13641 contig Csv1_Contig13641:25..627. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FE659157 vs. ExPASy Swiss-Prot
Match: RETOL_ARATH (Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2)

HSP 1 Score: 231.106 bits (588), Expect = 3.303e-60
Identity = 108/167 (64.67%), Postives = 136/167 (81.44%), Query Frame = -3
Query:   32 LCFFNFPITR-AASDSAYESFLQCLTQQTNSSDQQISNIVVTQTNSSYASVLRAYIRNARFNLSSTLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGLSYISDRPFFILDMFNLRSIDVDVKDESAWVEAGATLGELYYRIWQKSKLHGYPAGVCPTV 529
            L F + P++  + S+S Y SFL+C + +T S   QI++ V +QTN +++SVLRAYIRNARFN SSTLKPT+IITP  E+HVSAAV CSK + F LKIRSGGHDY+GLSYISD+PFFILDM N+R + VD+   SAW+ AGATLGE+YYRIW+KS++HG+PAGVCPTV
Sbjct:   19 LLFLSLPLSSFSQSNSVYNSFLKCFSDKTKSPQSQITDNVFSQTNPAFSSVLRAYIRNARFNTSSTLKPTIIITPRSESHVSAAVTCSKTLNFLLKIRSGGHDYDGLSYISDKPFFILDMSNIRDVSVDIASNSAWISAGATLGEVYYRIWEKSRVHGFPAGVCPTV 185          
BLAST of FE659157 vs. ExPASy Swiss-Prot
Match: RETO_PAPSO (Reticuline oxidase OS=Papaver somniferum GN=BBE1 PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.146e-28
Identity = 61/126 (48.41%), Postives = 82/126 (65.08%), Query Frame = -3
Query:   32 TQTNSSYASVLRAYIRNARFNLSSTLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGLSYISDRPFFILDMFNLRSIDVDVKDESAWVEAGATLGELYYRIWQKSKLHGYPAGVCPTV 409
            T TNS Y  +L A ++N  F   +  KP+ I+ P  +  +S+ V C  +  + +++RSGGH YEGLSY +D PF I+DM NL  I +DV  E+AWVE+GATLGELYY I Q +   G+ AG CPTV
Sbjct:   48 TDTNSDYFKLLHASMQNPLFAKPTVSKPSFIVMPGSKEELSSTVHCCTRESWTIRLRSGGHSYEGLSYTADTPFVIVDMMNLNRISIDVLSETAWVESGATLGELYYAIAQSTDTLGFTAGWCPTV 173          
BLAST of FE659157 vs. ExPASy Swiss-Prot
Match: RETO_ESCCA (Reticuline oxidase OS=Eschscholzia californica GN=BBE1 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.079e-26
Identity = 54/124 (43.55%), Postives = 80/124 (64.52%), Query Frame = -3
Query:   32 TNSSYASVLRAYIRNARFNLSSTLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGLSYISDRPFFILDMFNLRSIDVDVKDESAWVEAGATLGELYYRIWQKSKLHGYPAGVCPTV 403
            ++S +   L   I+N  F  S   KP+ II P  +  +S  + C ++  + +++RSGGH YEGLSY SD PF ++D+ NL  + +D++ E+AWVE+G+TLGELYY I + S   G+ AG CPTV
Sbjct:   46 SDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSGGHSYEGLSYTSDTPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTV 169          
The following BLAST results are available for this feature:
BLAST of FE659157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
RETOL_ARATH3.303e-6064.67Reticuline oxidase-like protein OS=Arabidopsis tha... [more]
RETO_PAPSO1.146e-2848.41Reticuline oxidase OS=Papaver somniferum GN=BBE1 P... [more]
RETO_ESCCA9.079e-2643.55Reticuline oxidase OS=Eschscholzia californica GN=... [more]
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Properties
Property NameValue
Genbank descriptionC96 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659157 ID=FE659157; Name=FE659157; organism=Citrus sinensis; type=EST; length=603bp
ACCCGCCGCCGCTCAAGTGGCCGCCAACGCCGACGGTGGGGCAGACGCCG
GCAGGATAGCCGTGCAGTTTGCTTTTTTGCCAAATCCTGTAGTAAAGTTC
ACCCAATGTGGCGCCAGCTTCGACCCAAGCGGACTCGTCTTTGACATCAA
CATCAATCGACCGTAAATTGAACATGTCGAGGATAAAGAAGGGCCTGTCG
GAGATGTAGGACAAGCCCTCGTAGTCATGGCCGCCGCTGCGGATTTTGAG
TTGGAAGCCAACTTGTTTGGAGCAAATCACGGCCGCTGAAACGTGAGCTT
CCTGCAGAGGGGTTATGATGACTGTGGGTTTCAGCGTTGATGAAAGGTTG
AAACGGGCGTTTCGGATGTACGCTCGCAAGACTGATGCGTACGATGAATT
GGTCTGAGTGACGACAATGTTTGAGATTTGTTGGTCTGAAGAGTTCGTTT
GCTGCGTTAAGCATTGTAGAAAAGATTCATAGGCCGAATCTGAAGCTGCC
CGTGTGATGGGGAAATTGAAAAAGCAAAGAACTAGAAGAATCGTTGAGAG
CCGAAAAGAAGTTGAACAGAGTGTTGATATTTTCATCATTTCCATTCGTG
TTC
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