FE659103

Overview
NameFE659103
Unique NameFE659103
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length230
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3510 contig Csv1_Contig3510:692..921. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA2_UROPA (Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Urochloa panicoides GN=PCK2 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.792e-36
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = -2
Query:    2 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLP 229
            HFISGYTA+VAGTEDG+KEPTATFSACFGAAFIM HPTKYAAMLAEKMQK+GATGWLVNTGWSGG YG G+RIKLP
Sbjct:  458 HFISGYTAIVAGTEDGVKEPTATFSACFGAAFIMYHPTKYAAMLAEKMQKYGATGWLVNTGWSGGRYGVGNRIKLP 533          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_MAIZE (Phosphoenolpyruvate carboxykinase [ATP] OS=Zea mays PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 3.056e-36
Identity = 70/76 (92.11%), Postives = 72/76 (94.74%), Query Frame = -2
Query:    2 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLP 229
            HFISGYTALVAGTEDGIKEP ATFSACFGAAFIMLHPTKYAAMLAEKMQK+GATGWLVNTGWSGG YG G RI+LP
Sbjct:  498 HFISGYTALVAGTEDGIKEPQATFSACFGAAFIMLHPTKYAAMLAEKMQKYGATGWLVNTGWSGGRYGVGKRIRLP 573          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_ARATH (Phosphoenolpyruvate carboxykinase [ATP] OS=Arabidopsis thaliana GN=PCKA PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 6.808e-36
Identity = 70/75 (93.33%), Postives = 72/75 (96.00%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKM+  GATGWLVNTGWSGGSYG G+RIKL
Sbjct:  503 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMKSQGATGWLVNTGWSGGSYGVGNRIKL 577          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA1_UROPA (Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Urochloa panicoides GN=PCK1 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 6.808e-36
Identity = 68/76 (89.47%), Postives = 72/76 (94.74%), Query Frame = -2
Query:    2 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLP 229
            HFISGYTA+VAGTEDG+KEPTATFSACFGAAFIM HPTKYAAMLAEKMQK+G TGWLVNTGWSGG YG G+RIKLP
Sbjct:  456 HFISGYTAIVAGTEDGVKEPTATFSACFGAAFIMYHPTKYAAMLAEKMQKYGRTGWLVNTGWSGGRYGVGNRIKLP 531          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_CUCSA (Phosphoenolpyruvate carboxykinase [ATP] OS=Cucumis sativus GN=PCK PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 2.587e-35
Identity = 67/75 (89.33%), Postives = 73/75 (97.33%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HFISGYTALVAGTE+G+KEP ATFSACFGAAFIMLHP++YAAMLAEKM+KHGATGWLVNTGWSGGSYG G+RIKL
Sbjct:  502 HFISGYTALVAGTEEGVKEPQATFSACFGAAFIMLHPSRYAAMLAEKMKKHGATGWLVNTGWSGGSYGSGNRIKL 576          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_LEPIN (Phosphoenolpyruvate carboxykinase [ATP] OS=Leptospira interrogans GN=pckA PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.854e-27
Identity = 55/76 (72.37%), Postives = 62/76 (81.58%), Query Frame = -2
Query:    2 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLP 229
            HF+SGYTA VAGTE GIKEPTATFSACFGAAF+ LHPTKYA +L EKM+KH    +L+NTG  GGSYG G R+ LP
Sbjct:  368 HFLSGYTAKVAGTERGIKEPTATFSACFGAAFMTLHPTKYAKLLGEKMKKHNVRAYLMNTGLVGGSYGVGKRMNLP 443          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_LEPIC (Phosphoenolpyruvate carboxykinase [ATP] OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=pckA PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.854e-27
Identity = 55/76 (72.37%), Postives = 62/76 (81.58%), Query Frame = -2
Query:    2 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLP 229
            HF+SGYTA VAGTE GIKEPTATFSACFGAAF+ LHPTKYA +L EKM+KH    +L+NTG  GGSYG G R+ LP
Sbjct:  368 HFLSGYTAKVAGTERGIKEPTATFSACFGAAFMTLHPTKYAKLLGEKMKKHNVRAYLMNTGLVGGSYGVGKRMNLP 443          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_DICDI (Phosphoenolpyruvate carboxykinase [ATP] OS=Dictyostelium discoideum GN=pckA PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.681e-26
Identity = 52/75 (69.33%), Postives = 61/75 (81.33%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HFI GYTA VAGTE G+ EPTATFS+C+G  FI+ HPTKYA MLA ++ KH A  WL+NTGW+GGS+G GSRIKL
Sbjct:  399 HFIQGYTAKVAGTEVGVTEPTATFSSCYGEPFIVWHPTKYAEMLASQLHKHSARAWLINTGWTGGSHGVGSRIKL 473          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_GEOMG (Phosphoenolpyruvate carboxykinase [ATP] OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=pckA PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.858e-25
Identity = 51/75 (68.00%), Postives = 60/75 (80.00%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HF+SGYTA VAGTE GI EP A FSACFGA F+ LHP+ YA +L EK+ +HG + WLVNTGWSGG YG GSR+K+
Sbjct:  372 HFLSGYTAKVAGTEAGITEPQAAFSACFGAPFMALHPSVYAKLLGEKIARHGVSCWLVNTGWSGGPYGVGSRMKI 446          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_NITSB (Phosphoenolpyruvate carboxykinase [ATP] OS=Nitratiruptor sp. (strain SB155-2) GN=pckA PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 7.061e-25
Identity = 51/76 (67.11%), Postives = 59/76 (77.63%), Query Frame = -2
Query:    2 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLP 229
            +F+SGYTA VAGTE GI EP ATFSACFG AF+ LHPT YA +L EK+ KHG   +LVNTGW+GG YG G R+ LP
Sbjct:  364 YFLSGYTAKVAGTERGITEPVATFSACFGEAFLPLHPTVYAKLLGEKIDKHGVNVYLVNTGWTGGPYGIGQRMSLP 439          
The following BLAST results are available for this feature:
BLAST of FE659103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA2_UROPA1.792e-3690.79Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Uroch... [more]
PCKA_MAIZE3.056e-3692.11Phosphoenolpyruvate carboxykinase [ATP] OS=Zea may... [more]
PCKA_ARATH6.808e-3693.33Phosphoenolpyruvate carboxykinase [ATP] OS=Arabido... [more]
PCKA1_UROPA6.808e-3689.47Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Uroch... [more]
PCKA_CUCSA2.587e-3589.33Phosphoenolpyruvate carboxykinase [ATP] OS=Cucumis... [more]
PCKA_LEPIN9.854e-2772.37Phosphoenolpyruvate carboxykinase [ATP] OS=Leptosp... [more]
PCKA_LEPIC9.854e-2772.37Phosphoenolpyruvate carboxykinase [ATP] OS=Leptosp... [more]
PCKA_DICDI1.681e-2669.33Phosphoenolpyruvate carboxykinase [ATP] OS=Dictyos... [more]
PCKA_GEOMG1.858e-2568.00Phosphoenolpyruvate carboxykinase [ATP] OS=Geobact... [more]
PCKA_NITSB7.061e-2567.11Phosphoenolpyruvate carboxykinase [ATP] OS=Nitrati... [more]

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Properties
Property NameValue
Genbank descriptionC42 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659103 ID=FE659103; Name=FE659103; organism=Citrus sinensis; type=EST; length=230bp
ACGGTAACTTGATGCGGCTGCCACAACCATAGCTTCCACCTGACCATCCA
GTGTTGACGAGCCATCCTGTAGCACCATGCTTCTGCATCTTCTCAGCCAG
CATTGCTGCATACTTGGTAGGATGCAGCATGATAAATGCTGCACCAAAGC
AAGCTGAAAATGTTGCCGTTGGCTCCTTAATACCATCCTCTGTTCCAGCT
ACCAAAGCAGTGTAGCCACTGATGAAATGG
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