EY720931

Overview
NameEY720931
Unique NameEY720931
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720931 vs. ExPASy Swiss-Prot
Match: RLC1_CITLI ((R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.300e-92
Identity = 168/205 (81.95%), Postives = 176/205 (85.85%), Query Frame = 3
Query:   87 MSSCINPSTLATSVNGFKCLPLATNRAAIRIMAKNKPVQCLVSTKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDXVXFICDDFXGILXLHEASYYSLKGETSWXKA 701
            MSSCINPSTL TSVN FKCLPLATN+AAIRIMAK KPVQCL+S KYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDE YKRRAEEL+GKVK AIKDV EPLDQLELIDNLQRLGLA+ FE E            KDYNWRKENLYATSLEFRLLRQHGYPVSQEVF+GFKDD   FICDDF GIL LHEASYYSL+GE+   +A
Sbjct:    1 MSSCINPSTLVTSVNAFKCLPLATNKAAIRIMAKYKPVQCLISAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDEAYKRRAEELRGKVKIAIKDVIEPLDQLELIDNLQRLGLAHRFETEIRNILNNIYNNNKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFNGFKDDQGGFICDDFKGILSLHEASYYSLEGESIMEEA 205          
BLAST of EY720931 vs. ExPASy Swiss-Prot
Match: MYRS_QUEIL (Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.851e-39
Identity = 91/199 (45.73%), Postives = 124/199 (62.31%), Query Frame = 3
Query:  150 LATNRAAIRIMAKNKPVQCLVSTKYDNLT-VDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYN-WRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDXVXF---ICDDFXGILXLHEASYYSLKGETSWXKAXXSPXNILEK 731
            L T+R     +A+  PVQC+V+ K      + RRSANYQPSIW+HD+++SL   Y  ET  R+   LK +V+  +  V  PL+QLELI+ LQRLGL+YHFE E               + W+ ENLYAT+L+FRLLRQHGY VSQEVF+ FKD+   F   +C+D  G+L L+EAS++ ++GE    +A       LE+
Sbjct:   27 LVTSRTRNGYLAR--PVQCMVANKVSTSPDILRRSANYQPSIWNHDYIESLRIEYVGETCTRQINVLKEQVRMMLHKVVNPLEQLELIEILQRLGLSYHFEEEIKRILDGVYNNDHGGDTWKAENLYATALKFRLLRQHGYSVSQEVFNSFKDERGSFKACLCEDTKGMLSLYEASFFLIEGENILEEARDFSTKHLEE 223          
BLAST of EY720931 vs. ExPASy Swiss-Prot
Match: TPS2_CANSA ((+)-alpha-pinene synthase, chloroplastic OS=Cannabis sativa PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.578e-32
Identity = 77/169 (45.56%), Postives = 99/169 (58.58%), Query Frame = 3
Query:  195 PVQCLV--STKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDXVXFIC----DDFXGILXLHEASYYSLKGE 683
            P+QC +  S   D  T+ RRSANY P IW  DF+QSL   Y  E Y  R+ +LK +VK  +  +   L QLELID LQRLG++YHFE E                  K +LYAT+LEFRLLR++GY + QE+F+ FKD+   F      DD  G+L L+EAS+Y   GE
Sbjct:   53 PIQCSLAKSPSSDTSTIVRRSANYDPPIWSFDFIQSLPCKYKGEPYTSRSNKLKEEVKKMLVGMENSLVQLELIDTLQRLGISYHFENEIISILKEYFTNISTNKNPKYDLYATALEFRLLREYGYAIPQEIFNDFKDETGKFKASIKNDDIKGVLALYEASFYVKNGE 221          
BLAST of EY720931 vs. ExPASy Swiss-Prot
Match: TPS1_CANSA ((-)-limonene synthase, chloroplastic OS=Cannabis sativa GN=TPS1 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.950e-28
Identity = 84/235 (35.74%), Postives = 124/235 (52.77%), Query Frame = 3
Query:   69 TASVYPMSSCIN----PSTLATSVNGFKCLPLATNRAAIRIMAKNKPVQCLVSTKYDNLTV------DRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKD----DXVXFICDDFXGILXLHEASYYSLKGETSWXKAXXSPXNILEK 731
            ++S  P+ S I+    P T  TS++  K  P   +++ ++  +++     +  T  DN +       DRRSANY P IW  DF+QSL   Y  E+Y  R  +L+  VK  +  V   L QLELID +QRLG++Y FE E             D      +LYAT+L+FRLLRQ+G+ V QE+F+ FK+    +    I +D  G L L+EAS++  KGE+   +A       L+K
Sbjct:   11 SSSSLPIWSSIDNRFTPKTSITSIS--KPKPKLKSKSNLKSRSRSSTCYSIQCTVVDNPSSTITNNSDRRSANYGPPIWSFDFVQSLPIQYKGESYTSRLNKLEKDVKRMLIGVENSLAQLELIDTIQRLGISYRFENEIISILKEKFTNNNDNPNPNYDLYATALQFRLLRQYGFEVPQEIFNNFKNHKTGEFKANISNDIMGALGLYEASFHGKKGESILEEARIFTTKCLKK 243          
BLAST of EY720931 vs. ExPASy Swiss-Prot
Match: MYRS1_ARATH (Myrcene/ocimene synthase 1, chloroplastic OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.497e-27
Identity = 67/149 (44.97%), Postives = 93/149 (62.42%), Query Frame = 3
Query:  234 TVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEP-LDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDXVXFICDDFXGILXLHEASYYSLK 677
            TV RRSANYQPS WDH  L S+ + +  +   R  + LK KV+  + D  +  LDQLE ID+LQ+LG++YHFE E            +  N ++ +L+AT+LEFRL RQHG+ VS++VF  F ++   F  DD  G++ L+EASY S K
Sbjct:   43 TVQRRSANYQPSRWDHHHLLSVENKFAKDKRVRERDLLKEKVRKMLNDEQKTYLDQLEFIDDLQKLGVSYHFEAEIDNILTSSYKKDRT-NIQESDLHATALEFRLFRQHGFNVSEDVFDVFMENCGKFDRDDIYGLISLYEASYLSTK 190          
BLAST of EY720931 vs. ExPASy Swiss-Prot
Match: CINS_ARATH (1,8-cineole synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS27 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.114e-26
Identity = 75/186 (40.32%), Postives = 104/186 (55.91%), Query Frame = 3
Query:  159 NRAAIRIMAKNKPVQCLVSTKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEP-LDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNW---RKENLYATSLEFRLLRQHGYPVSQEVFSGFKD--DXVXFICDDFXGILXLHEASYYSLKGETSWXK 698
            +R   + M K  P   LV        + RRS NYQPS W+H +L S+ + Y  ET     + LK KVK+ + D  +  L+QLELID+LQ+LG++YHFE E                W   ++E+L+ATSLEFRLLRQHG+ VS+ +F    D  +   F  ++  GI+ L+EASY S K +T   K
Sbjct:   26 HRFVCKSMTKTTPDTTLVE-------LSRRSGNYQPSPWNHCYLLSIENKYASETEVITRDVLKKKVKSMLDDEKKSRLEQLELIDDLQKLGVSYHFEIEINDTLTDLHLKMGRNCWKCDKEEDLHATSLEFRLLRQHGFDVSENIFDVIIDQIESNTFKTNNINGIISLYEASYLSTKSDTKLHK 204          
BLAST of EY720931 vs. ExPASy Swiss-Prot
Match: OCIS_ARATH ((E)-beta-ocimene synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS03 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.032e-26
Identity = 71/157 (45.22%), Postives = 91/157 (57.96%), Query Frame = 3
Query:  237 VDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXK-------DYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDXVXFICDDFXGILXLHEASYYSLKGET 686
            V RRSANYQPS+W H++L SL + Y  E    R   LK +V   + +    L+QLELID LQRLG++YHFE E                    D N R  +LYAT+LEFRLLRQHG+ ++Q+VF G  +  V     D  GIL L+EASY S + +T
Sbjct:   24 VSRRSANYQPSLWQHEYLLSLGNTYVKEDNVERVTLLKQEVSKMLNETEGLLEQLELIDTLQRLGVSYHFEQEIKKTLTNVHVKNVRAHKNRIDRN-RWGDLYATALEFRLLRQHGFSIAQDVFDG--NIGVDLDDKDIKGILSLYEASYLSTRIDT 177          
BLAST of EY720931 vs. ExPASy Swiss-Prot
Match: MYRS2_ARATH (Myrcene/ocimene synthase 2, chloroplastic OS=Arabidopsis thaliana GN=TPS24 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.049e-25
Identity = 68/163 (41.72%), Postives = 96/163 (58.90%), Query Frame = 3
Query:  231 LTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDV--TEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNW---RKENLYATSLEFRLLRQHGYPVSQEVFSGFKD--DXVXFICDDFXGILXLHEASYYSLKGETSWXK 698
            L + RRS NYQPS WDH +L S+ + Y +E        LK KVK  +++V     L++LELID+LQ+LG++YHFE E                W   ++E+L+AT+LEFRLLRQHG+ VS+++F    D  +   F  D+   I+ L+EASY S K +T   K
Sbjct:   43 LDLRRRSGNYQPSSWDHSYLLSIENKYVNEKEVITRHVLKKKVKKMLEEVETKSRLEKLELIDDLQKLGVSYHFEQEINNILTNFHLENGKNIWKCDKEEDLHATALEFRLLRQHGFGVSEDIFDVIIDKIESNTFKSDNITSIITLYEASYLSTKSDTKLHK 205          
BLAST of EY720931 vs. ExPASy Swiss-Prot
Match: BPPS_SALOF ((+)-bornyl diphosphate synthase, chloroplastic OS=Salvia officinalis PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.370e-25
Identity = 77/219 (35.16%), Postives = 118/219 (53.88%), Query Frame = 3
Query:   99 INPSTLATSVNGFKCLPLATNRAA-IRIMAKNKPVQCLVSTKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYN---WRKENLYATSLEFRLLRQHGYPVSQEVFSGFKD----DXVXFICDDFXGILXLHEASYYSLKGETSWXKAXXSPXNILEK 731
            +N S L+  +N    L    ++A  +   A    ++   S+K       RRS NYQP++WD +++QSLN+ YT+E +  R  EL  +V+  +K+  EP+ QLELI +L+ LGL+  F+ E            K ++     K +LY T+L FRLLRQHG+ +SQ+VF+ FK+    D    +  D  G+L L+EAS+   KGE +   A       L+K
Sbjct:    6 MNVSILSKPLNCLHNLERRPSKALLVPCTAPTARLRASCSSKLQEAHQIRRSGNYQPALWDSNYIQSLNTPYTEERHLDRKAELIVQVRILLKEKMEPVQQLELIHDLKYLGLSDFFQDEIKEILGVIYNEHKCFHNNEVEKMDLYFTALGFRLLRQHGFNISQDVFNCFKNEKGIDFKASLAQDTKGMLQLYEASFLLRKGEDTLELAREFATKCLQK 224          
BLAST of EY720931 vs. ExPASy Swiss-Prot
Match: SSS_SALOF ((+)-sabinene synthase, chloroplastic OS=Salvia officinalis PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.731e-23
Identity = 61/151 (40.40%), Postives = 91/151 (60.26%), Query Frame = 3
Query:  243 RRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFK----DDXVXFICDDFXGILXLHEASYYSLKGE 683
            RRS +YQPS+WD +++QSLN+ Y ++ +  R  EL  +V+  +K   E + QLELID+LQ LGL+Y F+ E            + ++    +LY T+L FR+LRQHG+ VS++VF  FK     D    +  D  G+L L+EAS+   +GE
Sbjct:   52 RRSGDYQPSLWDFNYIQSLNTPYKEQRHFNRQAELIMQVRMLLKVKMEAIQQLELIDDLQYLGLSYFFQDEIKQILSSIHNEPRYFH--NNDLYFTALGFRILRQHGFNVSEDVFDCFKIEKCSDFNANLAQDTKGMLQLYEASFLLREGE 200          
The following BLAST results are available for this feature:
BLAST of EY720931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RLC1_CITLI1.300e-9281.95(R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1[more]
MYRS_QUEIL4.851e-3945.73Myrcene synthase, chloroplastic OS=Quercus ilex PE... [more]
TPS2_CANSA2.578e-3245.56(+)-alpha-pinene synthase, chloroplastic OS=Cannab... [more]
TPS1_CANSA2.950e-2835.74(-)-limonene synthase, chloroplastic OS=Cannabis s... [more]
MYRS1_ARATH2.497e-2744.97Myrcene/ocimene synthase 1, chloroplastic OS=Arabi... [more]
CINS_ARATH2.114e-2640.321,8-cineole synthase, chloroplastic OS=Arabidopsis... [more]
OCIS_ARATH8.032e-2645.22(E)-beta-ocimene synthase, chloroplastic OS=Arabid... [more]
MYRS2_ARATH1.049e-2541.72Myrcene/ocimene synthase 2, chloroplastic OS=Arabi... [more]
BPPS_SALOF1.370e-2535.16(+)-bornyl diphosphate synthase, chloroplastic OS=... [more]
SSS_SALOF3.731e-2340.40(+)-sabinene synthase, chloroplastic OS=Salvia off... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-016-B09-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720931 ID=EY720931; Name=EY720931; organism=Citrus sinensis; type=EST; length=753bp
CCACGCGTCCGCCCACGCGTCCGATTAATTTGAGAATCCTTCCCAAGTAT
ACCTGTAAGCTAGCTTACACTGCATCTGTATATCCAATGTCTTCTTGCAT
TAATCCCTCAACCTTGGCTACCTCTGTAAATGGTTTCAAATGTCTTCCTC
TTGCAACAAATAGAGCAGCCATCAGAATCATGGCAAAAAATAAGCCAGTC
CAATGCCTTGTCAGCACCAAATATGATAATTTGACAGTTGATAGGAGATC
AGCAAACTACCAACCTTCAATTTGGGACCATGATTTTTTGCAGTCACTGA
ATAGCAACTATACGGATGAAACATACAAAAGACGAGCAGAAGAGCTGAAG
GGAAAAGTGAAGACAGCGATTAAGGATGTAACCGAGCCTCTGGATCAGTT
GGAGCTGATTGATAATTTGCAAAGACTTGGATTGGCTTATCATTTTGAGC
CTGAGATTCGGAACATATTGCGTAATATCCACAACCATAATAAAGATTAT
AATTGGAGAAAAGAAAATCTGTATGCAACCTCCCTTGAATTCAGACTACT
TAGACAACATGGCTATCCTGTTTCTCAAGAGGTTTTCAGTGGTTTTAAAG
ACGACAANGTANGCTTCATTTGTGATGATTTCANGGGAATACTGANCTTG
CATGAAGCCTCGTATTACAGCTTAAAAGGAGAAACATCATGGANGAAGGC
TGNCNATTCACCANTGAACATCTTAGAGAAATGATGATCACCANCGACAG
CAA
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