EY720930

Overview
NameEY720930
Unique NameEY720930
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY720930 vs. ExPASy Swiss-Prot
Match: Y3136_ARATH (Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana GN=At3g21360 PE=1 SV=1)

HSP 1 Score: 364.385 bits (934), Expect = 4.869e-100
Identity = 167/209 (79.90%), Postives = 188/209 (89.95%), Query Frame = 1 
Query:   13 EMAQGS*VPSKLFFFCEVEPGSGGETPIVLSHIVYERMKHKYPDFVEQLEQHGLIYTRVLGEKDDPSSPIGRGWKSTFLTEDKSIAEERAARLGMKLEWMEDGGVKTIMGPIPAIKYDESRQRKIWFNSMVAAYTGWKDDRNDPVKAVTFGNGKPLPADIVHDCLNILEEESVAIPWQKGDVLLIDNWAVLHARRSFNPPRRILXSLCK 639
            EMAQ    PSKLFF+CE+EP  GGETPIVLSH+VYERMK K+P+FV++LE+HGL+Y RVLGE DDPSSPIGRGWKSTFLT DK++AE+RA  LGMKLEW EDGG KT+MGPIPAIKYDESR RK+WFNSMVAAYTGW+D RNDP KAVTFG+GKPLPADIVHDCL ILEEE VA+PWQ+GDVLLIDNWAVLH+RR F+PPRR+L SLCK
Sbjct:  122 EMAQVREFPSKLFFYCEIEPKCGGETPIVLSHVVYERMKDKHPEFVQRLEEHGLLYVRVLGEDDDPSSPIGRGWKSTFLTHDKNLAEQRAVDLGMKLEWTEDGGAKTVMGPIPAIKYDESRNRKVWFNSMVAAYTGWEDKRNDPRKAVTFGDGKPLPADIVHDCLRILEEECVAVPWQRGDVLLIDNWAVLHSRRPFDPPRRVLASLCK 330
The following BLAST results are available for this feature:
BLAST of EY720930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y3136_ARATH4.869e-10079.90Clavaminate synthase-like protein At3g21360 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-016-B08-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720930 ID=EY720930; Name=EY720930; organism=Citrus sinensis; type=EST; length=881bp
CACGCGTCCGATGAAATGGCTCAGGGTTCCTGAGTCCCATCAAAATTATT
CTTCTTTTGTGAAGTGGAGCCAGGAAGTGGGGGAGAAACTCCAATTGTCC
TAAGTCACATTGTCTATGAGAGAATGAAGCATAAATACCCTGACTTCGTT
GAACAATTAGAACAGCATGGGTTGATTTATACACGTGTGTTAGGAGAAAA
GGATGATCCTTCATCTCCAATTGGCCGTGGCTGGAAATCCACTTTCTTGA
CTGAAGACAAGAGTATTGCTGAAGAAAGGGCAGCTAGGCTGGGAATGAAG
TTGGAATGGATGGAGGATGGTGGAGTGAAGACGATAATGGGGCCAATTCC
AGCTATAAAGTATGACGAATCTAGGCAACGAAAAATTTGGTTCAACAGCA
TGGTAGCTGCTTATACAGGATGGAAAGATGATCGAAATGATCCTGTCAAG
GCAGTCACTTTTGGGAATGGTAAGCCGTTGCCAGCTGATATTGTGCATGA
CTGTCTGAATATTCTTGAAGAGGAAAGTGTTGCGATCCCTTGGCAGAAAG
GTGATGTTTTGCTGATAGATAACTGGGCCGTGCTACATGCCCGAAGATCG
TTTAATCCTCCTCGCCGTATATTANCTTCACTTTGCAAGTAAGAAAATGC
GCTTCCCTTGTGCGTGATTTCTCATGATCATATGGCTGCTGCTTGTACAC
TGTGGCTGTCATCTGATATGTGGCAATTATGCATGCATGCCATATGTTCG
TGGGGTGGCCAAGCGGGCGTTGATGATTAAACCAAGAAAGTCCAATTTGT
TGAAATGGTCAACTCAATTAAATTAAGTCCCCCTAATAAGGTATTGGGGT
AAATAGCTGGCTTAATTAACCTTAATTGTAC
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